Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 8.7e-117 423.7 222 100.0
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 7.2e-87 324.3 223 80.3
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 2.6e-81 305.8 201 78.1
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 4.5e-81 305.1 222 72.5
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 8.5e-80 300.8 201 77.1
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.3e-75 287.0 222 69.8
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 8.2e-75 284.3 222 68.5
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.1e-74 283.9 222 68.5
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 2.4e-74 282.7 222 67.6
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.4e-74 282.7 222 68.0
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 3.1e-74 282.3 227 67.4
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 1.2e-73 280.4 221 68.3
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.6e-73 280.0 222 67.6
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 2.0e-73 279.6 220 68.6
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 2.7e-73 279.3 222 68.0
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 1.3e-72 276.9 220 67.3
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 2.9e-72 275.8 222 70.3
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 1.9e-71 273.1 222 66.7
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 2.5e-71 272.7 221 67.9
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 2.5e-71 272.7 221 67.9
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 2.5e-71 272.7 180 76.7
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 3.2e-71 272.3 221 66.5
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 1.2e-70 270.4 221 67.0
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 1.6e-70 270.0 199 69.8
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 4.7e-70 268.5 206 66.0
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 4.7e-70 268.5 201 68.2
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 8.0e-70 267.7 200 68.0
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 4.0e-69 265.4 203 69.5
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 5.2e-69 265.0 222 63.1
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 6.8e-69 264.6 227 64.3
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 1.2e-68 263.8 222 64.0
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 1.2e-68 263.8 222 64.4
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.5e-68 263.5 179 73.2
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 2.0e-68 263.1 249 59.8
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 4.4e-68 261.9 222 64.4
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 7.5e-68 261.2 217 63.6
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 9.8e-68 260.8 244 60.7
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 1.3e-67 260.4 222 61.3
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 1.7e-67 260.0 204 66.7
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 2.2e-67 259.6 222 62.2
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 3.7e-67 258.8 236 61.0
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 6.3e-67 258.1 197 70.6
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 8.3e-67 257.7 221 62.9
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 1.1e-66 257.3 222 62.6
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 1.1e-66 257.3 219 63.9
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 1.4e-66 256.9 197 70.1
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 3.1e-66 255.8 222 61.3
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 1.2e-65 253.8 223 60.1
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 1.2e-65 253.8 211 64.0
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 2.7e-65 252.7 222 61.7
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 1.3e-64 250.4 222 60.8
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 1.3e-64 250.4 230 60.4
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 6.5e-64 248.1 223 58.7
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 6.5e-64 248.1 221 59.3
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 1.5e-63 246.9 222 60.8
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 2.5e-63 246.1 180 68.3
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.5e-63 246.1 232 59.1
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 3.2e-63 245.7 222 59.9
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 4.2e-63 245.4 221 58.8
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 5.5e-63 245.0 222 59.9
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 7.2e-63 244.6 197 64.5
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.6e-62 243.4 159 75.5
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.6e-62 243.4 221 57.9
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 6.1e-62 241.5 158 76.6
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 8.0e-62 241.1 222 60.4
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 1.0e-61 240.7 221 59.3
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 1.4e-61 240.4 230 56.5
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.4e-61 240.4 156 75.6
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 5.2e-61 238.4 159 73.6
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 5.2e-61 238.4 213 63.4
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 6.8e-61 238.0 201 61.2
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 8.8e-61 237.7 170 71.8
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 1.2e-60 237.3 299 48.8
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 1.2e-60 237.3 210 57.6
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 2.0e-60 236.5 223 57.4
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 2.0e-60 236.5 221 59.3
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.3e-59 233.8 154 77.9
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 1.3e-59 233.8 226 56.2
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 1.7e-59 233.4 221 57.9
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 4.9e-59 231.9 212 58.5
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 1.8e-58 229.9 225 55.6
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 3.1e-58 229.2 152 75.0
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 4.1e-58 228.8 179 65.4
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 9.2e-58 227.6 231 54.1
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 2.0e-57 226.5 154 76.0
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 2.7e-57 226.1 219 57.1
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 5.9e-57 224.9 154 72.7
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 5.0e-56 221.9 150 74.7
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 8.6e-56 221.1 149 73.2
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.8e-53 213.4 229 53.7
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 2.6e-52 209.5 149 67.8
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 4.4e-52 208.8 150 67.3
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 4.4e-52 208.8 222 55.0
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 2.9e-51 206.1 177 61.6
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 6.6e-48 194.9 166 59.6
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 8.6e-48 194.5 155 61.3
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.6e-46 190.3 144 64.6
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 3.4e-44 182.6 225 49.8
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 1.7e-43 180.3 122 73.8
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 4.6e-41 172.2 184 53.3
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 2.8e-38 162.9 172 50.0
Actinidia29655 Actinidia chinensis HOM05D006789 ORTHO05D008460 9.8e-36 154.5 211 47.4
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 1.7e-35 153.7 139 61.9
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.6e-33 147.1 179 48.0
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 7.8e-33 144.8 146 57.5
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 3.3e-31 139.4 175 43.4
CARHR208350 Cardamine hirsuta HOM05D006789 ORTHO05D008460 4.0e-29 132.5 90 68.9
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 5.8e-28 128.6 170 46.5
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 1.9e-26 123.6 112 58.9
TAR629G1007 Trochodendron aralioides HOM05D001508 ORTHO05D008460 9.2e-26 121.3 79 73.4
TAR633G1630 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.2e-25 120.9 81 71.6
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 1.1e-21 107.8 82 68.3
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 9.9e-20 101.3 74 71.6
TAR636G3403 Trochodendron aralioides HOM05D006789 ORTHO05D008460 6.4e-19 98.6 71 67.6
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 1.6e-17 94.0 290 28.3
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 3.5e-17 92.8 98 55.1
BcaB03g15210 Brassica carinata HOM05D006789 ORTHO05D008460 7.8e-17 91.7 65 64.6
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 5.3e-13 79.0 56 69.6
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 6.9e-13 78.6 60 66.7
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 4.5e-12 75.9 85 55.3
MCO03G486 Micromonas commoda HOM05D006789 ORTHO05D008460 1.1e-10 71.2 264 29.5
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 7.1e-10 68.6 96 40.6
SHI05402 Sapria himalayana HOM05D005149 ORTHO05D006251 1.3e-06 57.8 66 43.9


User provided reference genes

Program Settings