Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0060 Salvia bowleyana HOM05D000063 ORTHO05D008977 6.1e-179 630.9 377 100.0
Migut.F00040 Erythranthe guttata HOM05D000063 ORTHO05D008977 1.9e-55 220.7 329 51.4
Oeu011973.1 Olea europaea HOM05D000063 ORTHO05D008977 9.5e-47 191.8 251 52.6
Oeu058794.2 Olea europaea HOM05D000063 ORTHO05D008977 3.4e-36 156.8 234 48.3
Actinidia05881 Actinidia chinensis HOM05D000063 ORTHO05D008977 5.4e-34 149.4 225 46.7
Manes.11G083500 Manihot esculenta HOM05D000063 ORTHO05D008977 5.6e-31 139.4 213 43.7
CSS0012789 Camellia sinensis var. sinensis HOM05D000063 ORTHO05D008977 7.3e-31 139.0 224 45.1
Gohir.A09G037800 Gossypium hirsutum HOM05D000063 ORTHO05D008977 6.2e-30 136.0 222 42.3
Potri.001G326000 Populus trichocarpa HOM05D000063 ORTHO05D008977 1.0e-29 135.2 219 42.9
Duzib264G0145 Durio zibethinus HOM05D000063 ORTHO05D008977 1.4e-29 134.8 222 44.1
Nitab4.5_0000519g0010 Nicotiana tabacum HOM05D000063 ORTHO05D008977 1.4e-29 134.8 206 46.1
Gohir.D09G038800 Gossypium hirsutum HOM05D000063 ORTHO05D008977 2.3e-29 134.0 222 41.9
Gorai.006G044300 Gossypium raimondii HOM05D000063 ORTHO05D008977 2.3e-29 134.0 222 41.9
Ciclev10018153m.g Citrus clementina HOM05D000063 ORTHO05D008977 1.2e-28 131.7 230 40.4
Actinidia36221 Actinidia chinensis HOM05D000063 ORTHO05D008977 1.5e-28 131.3 220 43.2
COL.COLO4_13300 Corchorus olitorius HOM05D000063 ORTHO05D008977 1.3e-27 128.3 219 42.0
Dinv33315 Davidia involucrata HOM05D000063 ORTHO05D008977 2.2e-27 127.5 226 45.1
Peaxi162Scf00420g00650 Petunia axillaris HOM05D000063 ORTHO05D008977 3.7e-27 126.7 259 37.1
Nitab4.5_0005858g0090 Nicotiana tabacum HOM05D000063 ORTHO05D008977 4.9e-27 126.3 213 42.3
Atru.chr6.2606 Acer truncatum HOM05D000063 ORTHO05D008977 8.3e-27 125.6 235 38.7
Glyma.16G053000 Glycine max HOM05D000063 ORTHO05D008977 1.1e-26 125.2 142 53.5
Duzib187G0070 Durio zibethinus HOM05D000063 ORTHO05D008977 4.1e-26 123.2 221 42.5
Lj1g0015499 Lotus japonicus HOM05D000063 ORTHO05D008977 7.0e-26 122.5 121 55.4
Oeu035253.1 Olea europaea HOM05D000063 ORTHO05D008977 7.0e-26 122.5 125 57.6
VMungo1383G2640 Vigna mungo HOM05D000063 ORTHO05D008977 1.2e-25 121.7 176 48.3
CAN.G473.127 Capsicum annuum HOM05D000063 ORTHO05D008977 1.6e-25 121.3 207 41.1
Medtr7g027190 Medicago truncatula HOM05D000063 ORTHO05D008977 2.7e-25 120.6 192 42.2
Cfa007201 Carpinus fangiana HOM05D000063 ORTHO05D008977 7.8e-25 119.0 220 40.5
Sopen02g038990 Solanum pennellii HOM05D000063 ORTHO05D008977 7.8e-25 119.0 197 42.1
TWI34G1964 Tripterygium wilfordii HOM05D000063 ORTHO05D008977 1.0e-24 118.6 256 39.5
DCAR_014493 Daucus carota HOM05D000063 ORTHO05D008977 3.0e-24 117.1 196 46.4
Glyma.19G096400 Glycine max HOM05D000063 ORTHO05D008977 5.0e-24 116.3 213 42.3
TWI60G0576 Tripterygium wilfordii HOM05D000063 ORTHO05D008977 5.0e-24 116.3 219 41.1
Cc07_g01010 Coffea canephora HOM05D000063 ORTHO05D008977 8.6e-24 115.5 247 38.5
TPR.G8575 Trifolium pratense HOM05D000063 ORTHO05D008977 8.6e-24 115.5 199 41.7
GSVIVG01033046001 Vitis vinifera HOM05D000063 ORTHO05D008977 1.1e-23 115.2 171 44.4
Oeu035257.1 Olea europaea HOM05D000063 ORTHO05D008977 1.5e-23 114.8 125 56.0
ClCG11G007600 Citrullus lanatus HOM05D000063 ORTHO05D008977 3.3e-23 113.6 206 40.3
Solyc02g094340.1 Solanum lycopersicum HOM05D000063 ORTHO05D008977 4.3e-23 113.2 199 40.2
arahy.Tifrunner.gnm1.ann1.8PQZ09 Arachis hypogaea HOM05D000063 ORTHO05D008977 1.6e-22 111.3 223 39.5
arahy.Tifrunner.gnm1.ann1.SRU6K5 Arachis hypogaea HOM05D000063 ORTHO05D008977 1.6e-22 111.3 223 39.5
CiPaw.03G005300 Carya illinoinensis HOM05D000063 ORTHO05D008977 8.1e-22 109.0 247 35.6
QL02p070702 Quercus lobata HOM05D000063 ORTHO05D008977 8.1e-22 109.0 184 45.1
TAR622G0460 Trochodendron aralioides HOM05D000063 ORTHO05D008977 1.4e-21 108.2 221 38.0
Sed0014204 Sechium edule HOM05D000063 ORTHO05D008977 3.1e-21 107.1 182 42.3
Psat3g177000 Pisum sativum HOM05D000063 ORTHO05D008977 5.2e-21 106.3 165 43.0
HanXRQChr09g0256471 Helianthus annuus HOM05D000063 ORTHO05D008977 6.8e-21 105.9 170 47.1
HanXRQChr15g0486991 Helianthus annuus HOM05D000063 ORTHO05D008977 6.8e-21 105.9 170 44.1
Prupe.3G309800 Prunus persica HOM05D000063 ORTHO05D008977 6.8e-21 105.9 255 34.5
Cpa.g.sc70.116 Carica papaya HOM05D000063 ORTHO05D008977 1.7e-19 101.3 214 39.3
ECA232G4001 Erigeron canadensis HOM05D000063 ORTHO05D008977 2.9e-19 100.5 237 35.0
TAR622G0028 Trochodendron aralioides HOM05D000063 ORTHO05D008977 4.9e-19 99.8 221 36.7
TAR629G2741 Trochodendron aralioides HOM05D000063 ORTHO05D008977 4.9e-19 99.8 224 35.7
FAN14G2429 Fragaria x ananassa HOM05D000063 ORTHO05D008977 5.4e-18 96.3 190 41.6
FvH4_6g53920 Fragaria vesca HOM05D000063 ORTHO05D008977 9.2e-18 95.5 190 41.1
MELO3C008170.2 Cucumis melo HOM05D000063 ORTHO05D008977 6.0e-17 92.8 174 37.9
CsaV3_2G033970 Cucumis sativus L. HOM05D000063 ORTHO05D008977 6.0e-17 92.8 144 43.1
FAN02G4617 Fragaria x ananassa HOM05D000063 ORTHO05D008977 7.8e-17 92.4 196 40.3
RcHm_v2.0_Chr2g0176081 Rosa chinensis HOM05D000063 ORTHO05D008977 7.8e-17 92.4 193 45.6
FAN09G2496 Fragaria x ananassa HOM05D000063 ORTHO05D008977 2.3e-16 90.9 133 48.1
FAN05G1945 Fragaria x ananassa HOM05D000063 ORTHO05D008977 5.1e-16 89.7 133 48.1
PGR083G2479 Punica granatum HOM05D000063 ORTHO05D008977 1.1e-15 88.6 185 38.9
Lsat_1_v5_gn_4_185880 Lactuca sativa HOM05D000063 ORTHO05D008977 1.5e-15 88.2 138 45.7
MD17G1011100 Malus domestica HOM05D000063 ORTHO05D008977 1.9e-15 87.8 202 37.6
Dinv25640 Davidia involucrata HOM05D000063 ORTHO05D008977 2.5e-15 87.4 128 49.2
MD09G1007200 Malus domestica HOM05D000063 ORTHO05D008977 2.5e-15 87.4 218 35.3
MBI11_g13059_MAGBIO Magnolia biondii HOM05D000063 ORTHO05D008977 5.2e-13 79.7 274 30.3
Eucgr.H03356 Eucalyptus grandis HOM05D000063 ORTHO05D008977 2.6e-12 77.4 292 30.8
CANSAT64G0486 Cannabis sativa HOM05D000063 ORTHO05D008977 8.4e-11 72.4 158 36.1
Aqoxy5G03248 Aquilegia oxysepala HOM05D000063 ORTHO05D008977 2.3e-08 64.3 139 36.7
Sabra16G0208500 Salix brachista HOM05D000063 ORTHO05D008977 2.3e-08 64.3 116 41.4
Aqoxy3G01673 Aquilegia oxysepala HOM05D000063 ORTHO05D008977 9.6e-07 58.9 212 30.7
Ca_19956_v3 Cicer arietinum L. HOM05D000063 ORTHO05D008977 8.1e-06 55.8 77 40.3


User provided reference genes

Program Settings