Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow4G0034 Salvia bowleyana HOM05D005867 ORTHO05D007273 3.2e-104 381.7 186 100.0
SalBow4G1382 Salvia bowleyana HOM05D005867 ORTHO05D007273 7.1e-104 380.6 186 99.5
MSTRG.21396 Avicennia marina HOM05D005867 ORTHO05D007273 3.9e-94 348.2 186 87.6
Sopen12g034670 Solanum pennellii HOM05D005867 ORTHO05D007273 4.8e-92 341.3 186 87.1
Oeu035742.1 Olea europaea HOM05D005867 ORTHO05D007273 1.1e-91 340.1 184 85.9
HanXRQChr02g0036871 Helianthus annuus HOM05D005867 ORTHO05D007273 2.4e-91 339.0 188 85.1
CAN.G575.64 Capsicum annuum HOM05D005867 ORTHO05D007273 3.1e-91 338.6 186 85.5
PGSC0003DMG400023838 Solanum tuberosum HOM05D005867 ORTHO05D007273 3.1e-91 338.6 186 86.0
Peaxi162Scf00029g00326 Petunia axillaris HOM05D005867 ORTHO05D007273 5.3e-91 337.8 185 85.4
SGA_v2.0_scaffold8G04610 Striga asiatica HOM05D005867 ORTHO05D007273 9.0e-91 337.0 186 84.4
MSTRG.17581 Avicennia marina HOM05D005867 ORTHO05D007273 1.2e-90 336.7 186 86.0
Migut.D00576 Erythranthe guttata HOM05D005867 ORTHO05D007273 1.2e-90 336.7 182 85.7
Solyc12g100050.2 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.2e-90 336.7 186 85.5
HanXRQChr14g0453051 Helianthus annuus HOM05D005867 ORTHO05D007273 1.5e-90 336.3 188 85.1
Nitab4.5_0001925g0100 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.5e-90 336.3 187 85.6
Ah.06g193630 Amaranthus hybridus HOM05D005867 ORTHO05D007273 4.5e-90 334.7 184 83.7
RcHm_v2.0_Chr5g0077191 Rosa chinensis HOM05D005867 ORTHO05D007273 4.5e-90 334.7 186 84.4
Sabra01G0013100 Salix brachista HOM05D005867 ORTHO05D007273 4.5e-90 334.7 184 84.2
Nitab4.5_0008647g0010 Nicotiana tabacum HOM05D005867 ORTHO05D007273 9.9e-90 333.6 187 84.5
Ah.04g161870 Amaranthus hybridus HOM05D005867 ORTHO05D007273 1.3e-89 333.2 184 83.7
ECA238G1591 Erigeron canadensis HOM05D005867 ORTHO05D007273 1.3e-89 333.2 188 83.5
Nitab4.5_0002766g0030 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.7e-89 332.8 186 83.9
Dinv36283 Davidia involucrata HOM05D005867 ORTHO05D007273 2.9e-89 332.0 184 83.7
Cc01_g01980 Coffea canephora HOM05D005867 ORTHO05D007273 6.4e-89 330.9 184 83.7
DCAR_002056 Daucus carota HOM05D005867 ORTHO05D007273 6.4e-89 330.9 183 83.1
Migut.N02304 Erythranthe guttata HOM05D005867 ORTHO05D007273 8.4e-89 330.5 184 82.6
Lsat_1_v5_gn_2_100781 Lactuca sativa HOM05D005867 ORTHO05D007273 8.4e-89 330.5 188 83.5
MD11G1028900 Malus domestica HOM05D005867 ORTHO05D007273 1.1e-88 330.1 184 83.2
Nitab4.5_0008868g0020 Nicotiana tabacum HOM05D005867 ORTHO05D007273 1.4e-88 329.7 186 83.9
Ciclev10016610m.g Citrus clementina HOM05D005867 ORTHO05D007273 1.9e-88 329.3 184 81.5
Actinidia16309 Actinidia chinensis HOM05D005867 ORTHO05D007273 2.4e-88 328.9 184 81.5
MD03G1024000 Malus domestica HOM05D005867 ORTHO05D007273 2.4e-88 328.9 184 82.6
Potri.001G018500 Populus trichocarpa HOM05D005867 ORTHO05D007273 2.4e-88 328.9 184 83.2
Rhsim13G0224100 Rhododendron simsii HOM05D005867 ORTHO05D007273 2.4e-88 328.9 184 81.0
TAR636G0304 Trochodendron aralioides HOM05D005867 ORTHO05D007273 3.2e-88 328.6 184 83.2
PGSC0003DMG400013588 Solanum tuberosum HOM05D005867 ORTHO05D007273 4.2e-88 328.2 186 81.7
Gorai.009G072300 Gossypium raimondii HOM05D005867 ORTHO05D007273 7.1e-88 327.4 184 80.4
Atru.chr3.2589 Acer truncatum HOM05D005867 ORTHO05D007273 9.3e-88 327.0 184 80.4
Cpa.g.sc84.80 Carica papaya HOM05D005867 ORTHO05D007273 9.3e-88 327.0 183 80.9
COL.COLO4_24845 Corchorus olitorius HOM05D005867 ORTHO05D007273 9.3e-88 327.0 184 79.3
EL10Ac4g10299 Beta vulgaris HOM05D005867 ORTHO05D007273 1.2e-87 326.6 184 82.1
Prupe.6G023200 Prunus persica HOM05D005867 ORTHO05D007273 1.2e-87 326.6 184 81.0
Solyc11g061760.3 Solanum lycopersicum HOM05D005867 ORTHO05D007273 1.6e-87 326.2 182 82.4
Sopen11g023660 Solanum pennellii HOM05D005867 ORTHO05D007273 1.6e-87 326.2 182 82.4
CANSAT54G1708 Cannabis sativa HOM05D005867 ORTHO05D007273 2.1e-87 325.9 184 81.0
FvH4_3g43090 Fragaria vesca HOM05D005867 ORTHO05D007273 2.7e-87 325.5 186 81.7
FAN11G1123 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.7e-87 325.5 186 81.7
FAN25G0812 Fragaria x ananassa HOM05D005867 ORTHO05D007273 2.7e-87 325.5 186 81.7
SHI29727 Sapria himalayana HOM05D005867 ORTHO05D007273 2.7e-87 325.5 184 81.0
FAN21G2433 Fragaria x ananassa HOM05D005867 ORTHO05D007273 3.5e-87 325.1 186 81.7
PGR119G1510 Punica granatum HOM05D005867 ORTHO05D007273 3.5e-87 325.1 184 79.3
Gohir.A05G068300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 4.6e-87 324.7 184 79.9
Gohir.D05G071300 Gossypium hirsutum HOM05D005867 ORTHO05D007273 4.6e-87 324.7 180 82.2
GSVIVG01025306001 Vitis vinifera HOM05D005867 ORTHO05D007273 4.6e-87 324.7 184 81.5
Oeu052048.1 Olea europaea HOM05D005867 ORTHO05D007273 6.0e-87 324.3 183 83.6
Cfa009733 Carpinus fangiana HOM05D005867 ORTHO05D007273 7.9e-87 323.9 184 82.1
Duzib168G0296 Durio zibethinus HOM05D005867 ORTHO05D007273 7.9e-87 323.9 184 79.3
Thecc.09G227900 Theobroma cacao HOM05D005867 ORTHO05D007273 7.9e-87 323.9 184 78.8
AUR62000096 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.3e-86 323.2 184 79.3
AUR62019269 Chenopodium quinoa HOM05D005867 ORTHO05D007273 1.3e-86 323.2 184 79.3
CiPaw.13G163600 Carya illinoinensis HOM05D005867 ORTHO05D007273 3.0e-86 322.0 184 82.6
CsaV3_1G042730 Cucumis sativus L. HOM05D005867 ORTHO05D007273 3.0e-86 322.0 184 80.4
Eucgr.J00791 Eucalyptus grandis HOM05D005867 ORTHO05D007273 3.0e-86 322.0 184 78.3
Manes.06G166900 Manihot esculenta HOM05D005867 ORTHO05D007273 3.0e-86 322.0 184 81.0
Sc06g0004490 Simmondsia chinensis HOM05D005867 ORTHO05D007273 3.0e-86 322.0 184 81.0
THA.LOC104804975 Tarenaya hassleriana HOM05D005867 ORTHO05D007273 5.1e-86 321.2 184 79.3
MELO3C015200.2 Cucumis melo HOM05D005867 ORTHO05D007273 6.7e-86 320.9 184 79.9
ClCG03G013300 Citrullus lanatus HOM05D005867 ORTHO05D007273 8.7e-86 320.5 184 79.9
TAR633G2552 Trochodendron aralioides HOM05D005867 ORTHO05D007273 1.1e-85 320.1 184 80.4
FAN16G1279 Fragaria x ananassa HOM05D005867 ORTHO05D007273 1.5e-85 319.7 186 81.2
Sed0004394 Sechium edule HOM05D005867 ORTHO05D007273 3.3e-85 318.5 184 77.7
VMungo1080G0295 Vigna mungo HOM05D005867 ORTHO05D007273 3.3e-85 318.5 184 77.7
Dinv08036 Davidia involucrata HOM05D005867 ORTHO05D007273 4.3e-85 318.2 178 82.0
Phvul.L010243 Phaseolus vulgaris HOM05D005867 ORTHO05D007273 4.3e-85 318.2 184 78.3
Glyma.15G033100 Glycine max HOM05D005867 ORTHO05D007273 7.4e-85 317.4 184 78.3
QL01p005337 Quercus lobata HOM05D005867 ORTHO05D007273 1.3e-84 316.6 184 79.9
CSS0048722 Camellia sinensis var. sinensis HOM05D005867 ORTHO05D007273 2.1e-84 315.8 182 79.1
unitig_21.g20645 Utricularia gibba HOM05D005867 ORTHO05D007273 2.8e-84 315.5 186 76.3
Nn2g15416 Nelumbo nucifera HOM05D005867 ORTHO05D007273 6.9e-83 310.8 184 77.7
Aa31LG3G14590 Aethionema arabicum HOM05D005867 ORTHO05D007273 1.2e-82 310.1 183 77.6
Thhalv10014788m.g Eutrema salsugineum HOM05D005867 ORTHO05D007273 1.2e-82 310.1 183 77.0
Sp6g30910 Schrenkiella parvula HOM05D005867 ORTHO05D007273 1.2e-82 310.1 183 77.6
AT5G13070 Arabidopsis thaliana HOM05D005867 ORTHO05D007273 1.5e-82 309.7 183 77.0
Carub.0006s1124 Capsella rubella HOM05D005867 ORTHO05D007273 1.5e-82 309.7 183 77.0
TWI60G1455 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.5e-82 309.7 183 77.0
AL6G23670 Arabidopsis lyrata HOM05D005867 ORTHO05D007273 2.0e-82 309.3 183 77.0
C09p64030 Brassica napus HOM05D005867 ORTHO05D007273 3.4e-82 308.5 180 76.7
BolC9t59241H Brassica oleracea HOM05D005867 ORTHO05D007273 3.4e-82 308.5 180 76.7
Haze_23087 Corylus avellana HOM05D005867 ORTHO05D007273 3.4e-82 308.5 183 79.2
BraA10t44575Z Brassica rapa HOM05D005867 ORTHO05D007273 4.5e-82 308.1 180 77.2
BcaC04g19155 Brassica carinata HOM05D002203 ORTHO05D007273 5.8e-82 307.8 180 76.7
BcaNung01174 Brassica carinata HOM05D005867 ORTHO05D007273 9.9e-82 307.0 180 76.1
A02p01670 Brassica napus HOM05D005867 ORTHO05D007273 9.9e-82 307.0 180 76.7
A10p25130 Brassica napus HOM05D005867 ORTHO05D007273 9.9e-82 307.0 180 76.7
BolC2t06533H Brassica oleracea HOM05D005867 ORTHO05D007273 9.9e-82 307.0 180 76.7
BraA02t05146Z Brassica rapa HOM05D005867 ORTHO05D007273 9.9e-82 307.0 180 76.7
CARHR200400 Cardamine hirsuta HOM05D005867 ORTHO05D007273 1.3e-81 306.6 183 76.5
BcaNung01858 Brassica carinata HOM05D005867 ORTHO05D007273 2.2e-81 305.8 180 76.1
C02p05880 Brassica napus HOM05D005867 ORTHO05D007273 2.9e-81 305.4 180 76.1
TWI34G0922 Tripterygium wilfordii HOM05D005867 ORTHO05D007273 1.2e-79 300.1 172 78.5
Lalb_Chr14g0372181 Lupinus albus HOM05D005867 ORTHO05D007273 6.0e-79 297.7 184 74.5
arahy.Tifrunner.gnm1.ann1.V9D8IR Arachis hypogaea HOM05D005867 ORTHO05D007273 1.1e-77 293.5 184 72.3
Duzib150G0087 Durio zibethinus HOM05D005867 ORTHO05D007273 1.5e-77 293.1 181 76.2
arahy.Tifrunner.gnm1.ann1.2D2P15 Arachis hypogaea HOM05D005867 ORTHO05D007273 2.5e-77 292.4 184 71.7
Aqoxy1G00241 Aquilegia oxysepala HOM05D005867 ORTHO05D007273 4.3e-77 291.6 184 72.8
Lj3g0003495 Lotus japonicus HOM05D005867 ORTHO05D007273 3.7e-76 288.5 184 73.4
PSO384G4422 Papaver somniferum HOM05D005867 ORTHO05D007273 6.2e-76 287.7 185 72.4
Cfa009734 Carpinus fangiana HOM05D005867 ORTHO05D007273 1.4e-75 286.6 184 71.7
PSO339G4569 Papaver somniferum HOM05D005867 ORTHO05D007273 4.0e-75 285.0 185 71.9
TPR.G6870 Trifolium pratense HOM05D005867 ORTHO05D007273 4.5e-74 281.6 184 70.7
Psat5g287440 Pisum sativum HOM05D005867 ORTHO05D007273 5.8e-74 281.2 186 71.0
Ca_01285_v3 Cicer arietinum L. HOM05D005867 ORTHO05D007273 3.8e-73 278.5 184 70.7
Medtr2g098170 Medicago truncatula HOM05D005867 ORTHO05D007273 3.8e-73 278.5 184 69.6
Medtr1g058050 Medicago truncatula HOM05D005867 ORTHO05D007273 1.1e-72 276.9 184 69.6
Medtr2g017985 Medicago truncatula HOM05D005867 ORTHO05D007273 1.1e-72 276.9 184 69.0
Medtr8g096810 Medicago truncatula HOM05D005867 ORTHO05D007273 7.1e-72 274.2 184 68.5
QL01p005297 Quercus lobata HOM05D005867 ORTHO05D007273 9.3e-72 273.9 184 67.4
MBI17_g30524_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 7.9e-71 270.8 173 71.1
CiPaw.13G163500 Carya illinoinensis HOM05D005867 ORTHO05D007273 1.3e-70 270.0 180 68.3
ATR0605G298 Amborella trichopoda HOM05D005867 ORTHO05D007273 6.1e-63 244.6 183 60.7
Mapoly0061s0125 Marchantia polymorpha HOM05D005867 ORTHO05D007273 1.5e-61 240.0 180 57.2
SMO147G0033 Selaginella moellendorffii HOM05D005867 ORTHO05D007273 7.7e-58 227.6 180 56.1
Pp3c14_26010 Physcomitrium patens HOM05D005867 ORTHO05D007273 1.6e-55 219.9 177 55.4
Pp3c1_37310 Physcomitrium patens HOM05D005867 ORTHO05D007273 4.7e-55 218.4 183 53.0
Os02g0717900 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 9.7e-53 210.7 190 51.6
MBI01_g27622_MAGBIO Magnolia biondii HOM05D005867 ORTHO05D007273 2.6e-50 202.6 172 58.7
CBR_g20418 Chara braunii HOM05D005867 ORTHO05D007273 3.8e-49 198.7 181 49.2
HPP92_022794 Vanilla planifolia HOM05D005867 ORTHO05D007273 3.1e-43 179.1 168 50.0
Os09g0486000 Oryza sativa ssp. japonica HOM05D005867 ORTHO05D007273 1.9e-40 169.9 180 48.3
Lj2P647T17 Lonicera japonica HOM05D005867 ORTHO05D007273 9.7e-37 157.5 89 85.4
Zm00001eb316590 Zea mays HOM05D005867 ORTHO05D007273 4.7e-31 138.7 196 40.8
Zm00001eb189280 Zea mays HOM05D005867 ORTHO05D007273 8.0e-23 111.3 88 59.1
Mapoly0008s0230 Marchantia polymorpha HOM05D005867 ORTHO05D254737 2.0e-21 106.7 154 35.1
Actinidia28459 Actinidia chinensis HOM05D005867 ORTHO05D055216 2.7e-18 96.3 54 79.6
Cfa022043 Carpinus fangiana HOM05D002321 ORTHO05D006940 2.1e-07 60.1 88 34.1


User provided reference genes

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