Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 8.7e-105 383.6 193 100.0
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 2.3e-73 279.3 200 73.5
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 4.3e-72 275.0 194 73.7
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 5.1e-65 251.5 194 70.1
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.1e-64 250.4 193 68.4
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 1.1e-62 243.8 150 79.3
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 3.9e-57 225.3 144 77.1
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 6.7e-57 224.6 179 67.6
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 6.7e-57 224.6 179 67.6
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 8.8e-57 224.2 193 61.7
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 1.5e-56 223.4 129 81.4
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 4.4e-56 221.9 196 63.8
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 2.2e-55 219.5 181 66.3
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 4.8e-55 218.4 182 64.3
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 8.2e-55 217.6 182 63.7
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 8.2e-55 217.6 193 57.5
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 1.1e-54 217.2 140 75.7
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 1.1e-54 217.2 171 67.8
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 1.8e-54 216.5 195 62.6
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 3.1e-54 215.7 193 57.5
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 4.1e-54 215.3 151 72.8
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 5.3e-54 214.9 182 63.7
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 9.1e-54 214.2 145 73.8
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 9.1e-54 214.2 174 64.4
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 9.1e-54 214.2 197 61.4
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 1.2e-53 213.8 147 74.1
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 3.5e-53 212.2 169 68.0
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 4.5e-53 211.8 142 75.4
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 1.3e-52 210.3 174 64.4
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.3e-52 210.3 139 74.8
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 2.2e-52 209.5 148 70.3
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 2.9e-52 209.1 195 56.9
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 3.8e-52 208.8 179 62.0
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 5.0e-52 208.4 124 80.6
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 5.0e-52 208.4 146 74.0
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 5.0e-52 208.4 143 72.7
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 1.5e-51 206.8 187 59.9
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.5e-51 206.8 187 60.4
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 2.5e-51 206.1 183 59.6
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 2.5e-51 206.1 148 68.9
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 3.2e-51 205.7 146 70.5
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 5.5e-51 204.9 148 68.9
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 9.4e-51 204.1 203 58.6
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.6e-50 203.4 173 64.2
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 2.1e-50 203.0 170 61.2
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 4.7e-50 201.8 139 73.4
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.8e-49 199.9 150 66.7
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 3.0e-49 199.1 149 70.5
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 3.0e-49 199.1 140 73.6
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 6.8e-49 198.0 114 82.5
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 8.8e-49 197.6 154 63.0
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 1.2e-48 197.2 114 83.3
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 2.0e-48 196.4 184 59.8
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 5.7e-48 194.9 150 66.0
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 5.7e-48 194.9 147 66.0
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 7.5e-48 194.5 138 73.9
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 7.5e-48 194.5 166 59.6
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 1.3e-47 193.7 201 52.2
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 1.3e-47 193.7 171 60.8
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 3.7e-47 192.2 131 69.5
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 4.8e-47 191.8 124 71.0
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 6.3e-47 191.4 142 68.3
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 6.3e-47 191.4 129 73.6
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 2.4e-46 189.5 125 74.4
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 2.4e-46 189.5 125 74.4
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 5.3e-46 188.3 187 57.2
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 7.0e-46 188.0 182 58.8
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 7.0e-46 188.0 151 64.9
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 9.1e-46 187.6 126 73.0
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 1.6e-45 186.8 125 73.6
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 1.6e-45 186.8 137 70.1
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 2.0e-45 186.4 197 53.3
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 2.7e-45 186.0 129 72.1
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 2.7e-45 186.0 129 72.1
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 7.7e-45 184.5 126 71.4
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 1.7e-44 183.3 125 75.2
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 6.5e-44 181.4 145 68.3
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 1.5e-43 180.3 178 57.9
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 3.2e-43 179.1 183 51.9
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 1.2e-42 177.2 144 63.2
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.0e-41 174.1 167 57.5
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 2.0e-40 169.9 132 66.7
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 2.0e-40 169.9 140 65.7
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.6e-40 169.5 137 66.4
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.7e-40 168.3 121 69.4
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 7.5e-40 167.9 195 49.2
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 1.7e-39 166.8 199 52.3
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 1.7e-39 166.8 178 52.8
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 4.5e-37 158.7 175 50.9
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 2.3e-36 156.4 177 52.0
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 2.3e-36 156.4 177 52.0
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 1.5e-32 143.7 150 54.0
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 4.4e-32 142.1 119 58.0
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 2.8e-31 139.4 127 55.1
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 3.2e-30 136.0 138 52.2
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 3.5e-29 132.5 127 54.3
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 3.9e-28 129.0 351 29.6
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 3.9e-28 129.0 82 70.7
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 1.5e-27 127.1 82 70.7
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 3.3e-27 125.9 86 69.8
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 9.5e-27 124.4 127 52.8
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 2.9e-23 112.8 80 68.8
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 9.2e-14 81.3 51 72.5
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.0e-09 65.9 52 61.5
MD12G1029500 Malus domestica HOM05D007282 ORTHO05D009214 9.9e-08 61.2 104 43.3
MD14G1029800 Malus domestica HOM05D007282 ORTHO05D009214 3.7e-07 59.3 101 44.6
MCO16G381 Micromonas commoda HOM05D007282 ORTHO05D009214 2.4e-06 56.6 74 37.8
Ciclev10013843m.g Citrus clementina HOM05D007282 ORTHO05D009214 3.2e-06 56.2 51 54.9


User provided reference genes

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