Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4646 Salvia bowleyana HOM05D005420 ORTHO05D006524 2.1e-152 542.3 279 100.0
MSTRG.24552 Avicennia marina HOM05D005420 ORTHO05D006524 1.4e-111 406.8 285 79.6
Migut.G00921 Erythranthe guttata HOM05D005420 ORTHO05D006524 2.1e-107 392.9 267 78.7
Cc03_g15990 Coffea canephora HOM05D005420 ORTHO05D006524 4.3e-105 385.2 253 79.4
SGA_v2.0_scaffold12G06218 Striga asiatica HOM05D005420 ORTHO05D006524 1.6e-104 383.3 298 71.1
unitig_27.g25143 Utricularia gibba HOM05D005420 ORTHO05D006524 2.6e-102 375.9 271 74.9
FvH4_1g00160 Fragaria vesca HOM05D005420 ORTHO05D006524 7.6e-102 374.4 274 74.1
FAN26G3138 Fragaria x ananassa HOM05D005420 ORTHO05D006524 7.6e-102 374.4 274 74.1
FAN28G0609 Fragaria x ananassa HOM05D005420 ORTHO05D006524 7.6e-102 374.4 274 74.1
Dinv33245 Davidia involucrata HOM05D005420 ORTHO05D006524 1.1e-100 370.5 220 86.4
FAN23G1410 Fragaria x ananassa HOM05D005420 ORTHO05D006524 1.1e-100 370.5 274 74.5
RcHm_v2.0_Chr2g0084451 Rosa chinensis HOM05D005420 ORTHO05D006524 1.4e-100 370.2 223 84.8
Nitab4.5_0008205g0010 Nicotiana tabacum HOM05D005420 ORTHO05D006524 2.4e-100 369.4 292 69.9
Eucgr.H01455 Eucalyptus grandis HOM05D005420 ORTHO05D006524 7.1e-100 367.9 288 70.5
Atru.chr12.1712 Acer truncatum HOM05D005420 ORTHO05D006524 3.5e-99 365.5 225 84.0
CANSAT56G1087 Cannabis sativa HOM05D005420 ORTHO05D006524 3.5e-99 365.5 203 91.1
ECA248G1232 Erigeron canadensis HOM05D005420 ORTHO05D006524 3.5e-99 365.5 201 91.0
Prupe.7G269700 Prunus persica HOM05D005420 ORTHO05D006524 4.6e-99 365.2 222 83.8
HanXRQChr11g0343501 Helianthus annuus HOM05D005420 ORTHO05D006524 1.0e-98 364.0 272 73.2
Nitab4.5_0000013g0040 Nicotiana tabacum HOM05D005420 ORTHO05D006524 1.8e-98 363.2 265 73.6
CSS0022736 Camellia sinensis var. sinensis HOM05D005420 ORTHO05D006524 2.3e-98 362.8 224 83.0
DCAR_005460 Daucus carota HOM05D005420 ORTHO05D006524 2.3e-98 362.8 227 83.7
CSS0017727 Camellia sinensis var. sinensis HOM05D005420 ORTHO05D006524 3.0e-98 362.5 232 81.0
Ciclev10012405m.g Citrus clementina HOM05D005420 ORTHO05D006524 3.0e-98 362.5 222 83.8
Solyc08g015620.3 Solanum lycopersicum HOM05D005420 ORTHO05D006524 6.7e-98 361.3 209 88.0
Sopen08g005610 Solanum pennellii HOM05D005420 ORTHO05D006524 6.7e-98 361.3 209 88.0
Aqoxy1G01859 Aquilegia oxysepala HOM05D005420 ORTHO05D006524 1.1e-97 360.5 202 90.6
CiPaw.01G201600 Carya illinoinensis HOM05D005420 ORTHO05D006524 1.1e-97 360.5 210 87.6
MD00G1087500 Malus domestica HOM05D005420 ORTHO05D006524 1.1e-97 360.5 271 72.7
Peaxi162Scf01205g00032 Petunia axillaris HOM05D005420 ORTHO05D006524 5.6e-97 358.2 207 87.9
HanXRQChr01g0023651 Helianthus annuus HOM05D005420 ORTHO05D006524 7.4e-97 357.8 258 74.4
Cfa008513 Carpinus fangiana HOM05D005420 ORTHO05D006524 9.6e-97 357.5 211 85.8
Glyma.17G000800 Glycine max HOM05D005420 ORTHO05D006524 1.3e-96 357.1 222 81.5
TAR636G0539 Trochodendron aralioides HOM05D005420 ORTHO05D006524 1.3e-96 357.1 275 69.8
unitig_699.g19464 Utricularia gibba HOM05D005420 ORTHO05D006524 1.3e-96 357.1 193 92.7
Thecc.05G186000 Theobroma cacao HOM05D005420 ORTHO05D006524 2.1e-96 356.3 265 73.2
Glyma.07G273700 Glycine max HOM05D005420 ORTHO05D006524 2.8e-96 355.9 200 88.5
TAR365G1242 Trochodendron aralioides HOM05D005420 ORTHO05D006524 2.8e-96 355.9 252 74.2
Cpa.g.sc151.6 Carica papaya HOM05D005420 ORTHO05D006524 4.8e-96 355.1 203 89.7
Manes.12G003300 Manihot esculenta HOM05D005420 ORTHO05D006524 4.8e-96 355.1 247 75.3
arahy.Tifrunner.gnm1.ann1.D6NWCJ Arachis hypogaea HOM05D005420 ORTHO05D006524 6.2e-96 354.8 222 82.4
arahy.Tifrunner.gnm1.ann1.EMGW5K Arachis hypogaea HOM05D005420 ORTHO05D006524 6.2e-96 354.8 222 82.4
MD15G1143300 Malus domestica HOM05D005420 ORTHO05D006524 8.1e-96 354.4 272 72.8
CiPaw.02G124600 Carya illinoinensis HOM05D005420 ORTHO05D006524 1.1e-95 354.0 279 70.6
GSVIVG01038249001 Vitis vinifera HOM05D005420 ORTHO05D006524 1.1e-95 354.0 203 88.2
Lsat_1_v5_gn_1_76981 Lactuca sativa HOM05D005420 ORTHO05D006524 1.8e-95 353.2 202 88.6
VMungo1215G3385 Vigna mungo HOM05D005420 ORTHO05D006524 1.8e-95 353.2 247 75.3
TWI36G0345 Tripterygium wilfordii HOM05D005420 ORTHO05D006524 2.4e-95 352.8 201 88.1
Potri.013G084300 Populus trichocarpa HOM05D005420 ORTHO05D006524 3.1e-95 352.4 233 78.1
AUR62002482 Chenopodium quinoa HOM05D005420 ORTHO05D006524 4.0e-95 352.1 202 87.6
Duzib177G0155 Durio zibethinus HOM05D005420 ORTHO05D006524 4.0e-95 352.1 243 77.4
PGR119G0486 Punica granatum HOM05D005420 ORTHO05D006524 4.0e-95 352.1 197 90.4
Gohir.A02G106300 Gossypium hirsutum HOM05D005420 ORTHO05D006524 6.9e-95 351.3 268 71.6
Lj6C285T2 Lonicera japonica HOM05D005420 ORTHO05D006524 6.9e-95 351.3 197 90.9
Lj4g0016379 Lotus japonicus HOM05D005420 ORTHO05D006524 6.9e-95 351.3 222 81.1
QL10p064332 Quercus lobata HOM05D005420 ORTHO05D006524 6.9e-95 351.3 261 72.0
AUR62023710 Chenopodium quinoa HOM05D005420 ORTHO05D006524 9.0e-95 350.9 202 87.6
Sabra13G0078900 Salix brachista HOM05D005420 ORTHO05D006524 3.4e-94 349.0 233 77.3
ClCG09G014850 Citrullus lanatus HOM05D005420 ORTHO05D006524 4.5e-94 348.6 267 73.4
AL4G42820 Arabidopsis lyrata HOM05D005420 ORTHO05D006524 7.6e-94 347.8 284 69.7
Sed0010932 Sechium edule HOM05D005420 ORTHO05D006524 7.6e-94 347.8 262 72.9
Ah.07g203200 Amaranthus hybridus HOM05D005420 ORTHO05D006524 1.0e-93 347.4 210 82.9
CDE09G0694 Ceratophyllum demersum HOM05D005420 ORTHO05D006524 1.0e-93 347.4 210 81.9
CsaV3_7G022350 Cucumis sativus L. HOM05D005420 ORTHO05D006524 1.0e-93 347.4 193 90.2
Gohir.D03G071700 Gossypium hirsutum HOM05D005420 ORTHO05D006524 1.0e-93 347.4 268 70.9
Gorai.003G088300 Gossypium raimondii HOM05D005420 ORTHO05D006524 1.0e-93 347.4 261 71.6
MBI07_g10354_MAGBIO Magnolia biondii HOM05D005420 ORTHO05D006524 2.2e-93 346.3 200 85.0
Rhsim09G0003700 Rhododendron simsii HOM05D005420 ORTHO05D006524 2.2e-93 346.3 223 81.6
vmacro00721 Vaccinium macrocarpon HOM05D005420 ORTHO05D006524 2.2e-93 346.3 228 81.1
Duzib128G1088 Durio zibethinus HOM05D005420 ORTHO05D006524 4.9e-93 345.1 195 89.7
Actinidia34566 Actinidia chinensis HOM05D005420 ORTHO05D006524 6.5e-93 344.7 263 71.5
Aa31LG1G25640 Aethionema arabicum HOM05D005420 ORTHO05D006524 8.4e-93 344.4 194 89.7
EL10Ac3g06165 Beta vulgaris HOM05D005420 ORTHO05D006524 8.4e-93 344.4 283 68.2
AT2G43945 Arabidopsis thaliana HOM05D005420 ORTHO05D006524 1.1e-92 344.0 211 82.9
THA.LOC104802345 Tarenaya hassleriana HOM05D005420 ORTHO05D006524 2.5e-92 342.8 195 88.7
Phvul.003G074600 Phaseolus vulgaris HOM05D005420 ORTHO05D006524 4.2e-92 342.0 222 77.9
THA.LOC104804283 Tarenaya hassleriana HOM05D005420 ORTHO05D006524 4.2e-92 342.0 211 83.4
Carub.0004s2651 Capsella rubella HOM05D005420 ORTHO05D006524 1.6e-91 340.1 195 87.2
Thhalv10001571m.g Eutrema salsugineum HOM05D005420 ORTHO05D006524 1.6e-91 340.1 194 87.6
PSO675G2924 Papaver somniferum HOM05D005420 ORTHO05D006524 1.6e-91 340.1 203 83.7
PSO732G0217 Papaver somniferum HOM05D005420 ORTHO05D006524 1.6e-91 340.1 203 83.7
A03p24600 Brassica napus HOM05D005420 ORTHO05D006524 2.7e-91 339.3 194 87.1
CARHR139120 Cardamine hirsuta HOM05D005420 ORTHO05D006524 3.5e-91 339.0 194 87.6
C03p29330 Brassica napus HOM05D005420 ORTHO05D006524 6.0e-91 338.2 194 87.1
BolC3t15280H Brassica oleracea HOM05D005420 ORTHO05D006524 6.0e-91 338.2 194 87.1
GSVIVG01026140001 Vitis vinifera HOM05D005420 ORTHO05D006524 1.0e-90 337.4 210 80.0
BcaB06g29350 Brassica carinata HOM05D005420 ORTHO05D006524 1.3e-90 337.0 195 87.7
BolC4t22118H Brassica oleracea HOM05D005420 ORTHO05D006524 1.3e-90 337.0 195 87.2
BraA05t19397Z Brassica rapa HOM05D005420 ORTHO05D006524 1.3e-90 337.0 287 66.6
A05p04100 Brassica napus HOM05D005420 ORTHO05D006524 2.3e-90 336.3 285 67.0
HPP92_024700 Vanilla planifolia HOM05D005420 ORTHO05D006524 3.0e-90 335.9 205 80.0
Actinidia18399 Actinidia chinensis HOM05D005420 ORTHO05D006524 5.1e-90 335.1 197 86.3
BcaC02g12350 Brassica carinata HOM05D005420 ORTHO05D006524 5.1e-90 335.1 273 68.5
C04p04880 Brassica napus HOM05D005420 ORTHO05D006524 5.1e-90 335.1 273 68.5
BraA03t11665Z Brassica rapa HOM05D005420 ORTHO05D006524 5.1e-90 335.1 194 86.1
BcaB02g08884 Brassica carinata HOM05D005420 ORTHO05D006524 6.7e-90 334.7 198 85.4
Carub.0005s2660 Capsella rubella HOM05D005420 ORTHO05D006524 1.5e-89 333.6 195 85.6
ATR0743G098 Amborella trichopoda HOM05D005420 ORTHO05D006524 4.3e-89 332.0 224 76.8
Aa31LG10G14100 Aethionema arabicum HOM05D005420 ORTHO05D006524 7.4e-89 331.3 259 69.9
TWI36G1305 Tripterygium wilfordii HOM05D005420 ORTHO05D006524 2.8e-88 329.3 188 87.8
Psat4g001320 Pisum sativum HOM05D005420 ORTHO05D006524 6.3e-88 328.2 201 83.6
AT3G59870 Arabidopsis thaliana HOM05D005420 ORTHO05D006524 1.1e-87 327.4 214 77.1
Os01g0338600 Oryza sativa ssp. japonica HOM05D005420 ORTHO05D006524 1.2e-86 323.9 223 75.8
Zm00001eb159810 Zea mays HOM05D005420 ORTHO05D006524 1.0e-85 320.9 210 77.6
Migut.N03031 Erythranthe guttata HOM05D005420 ORTHO05D006524 3.2e-84 315.8 277 67.9
Sp4g26040 Schrenkiella parvula HOM05D005420 ORTHO05D006524 1.6e-83 313.5 272 67.6
SEGI_26827 Sequoiadendron giganteum HOM05D005420 ORTHO05D006524 3.6e-83 312.4 196 81.1
Mapoly0136s0029 Marchantia polymorpha HOM05D005420 ORTHO05D006524 3.0e-82 309.3 223 73.5
SMO367G0538 Selaginella moellendorffii HOM05D005420 ORTHO05D006524 6.7e-82 308.1 185 82.2
Pp3c8_21410 Physcomitrium patens HOM05D005420 ORTHO05D006524 3.3e-81 305.8 211 72.5
Pp3c24_16460 Physcomitrium patens HOM05D005420 ORTHO05D006524 1.1e-79 300.8 273 62.3
Haze_11131 Corylus avellana HOM05D005420 ORTHO05D006524 3.1e-79 299.3 337 52.8
Dinv24753 Davidia involucrata HOM05D005420 ORTHO05D006524 1.7e-77 293.5 250 68.0
Nn7g37463 Nelumbo nucifera HOM05D005420 ORTHO05D006524 1.6e-75 287.0 209 71.8
TPR.G6015 Trifolium pratense HOM05D005420 ORTHO05D006524 2.7e-75 286.2 208 75.5
Manes.13G003200 Manihot esculenta HOM05D005420 ORTHO05D006524 3.0e-74 282.7 157 91.1
Nn3g18334 Nelumbo nucifera HOM05D005420 ORTHO05D006524 6.9e-71 271.6 203 71.4
Sc25g0003040 Simmondsia chinensis HOM05D005420 ORTHO05D006524 1.1e-68 264.2 165 80.6
Medtr4g134910 Medicago truncatula HOM05D005420 ORTHO05D006524 2.7e-67 259.6 151 87.4
Hund22588 Selenicereus undatus HOM05D005420 ORTHO05D006524 7.9e-67 258.1 197 71.6
Lalb_Chr18g0044961 Lupinus albus HOM05D005420 ORTHO05D006524 8.8e-66 254.6 134 96.3
MCO05G102 Micromonas commoda HOM05D005420 ORTHO05D006524 9.7e-65 251.1 160 76.2
Oeu022910.1 Olea europaea HOM05D005420 ORTHO05D006524 3.7e-64 249.2 135 95.6
Cre16.g676450 Chlamydomonas reinhardtii HOM05D005420 ORTHO05D006524 1.0e-61 241.1 192 65.1
Atru.chr12.1711 Acer truncatum HOM05D005420 ORTHO05D006524 7.2e-60 235.0 191 69.1
PRCOL_00006877 Prasinoderma coloniale HOM05D005420 ORTHO05D006524 9.4e-60 234.6 160 71.2
Zm00001eb356860 Zea mays HOM05D005420 ORTHO05D006524 6.7e-58 228.4 254 54.3
Ca_13540_v3 Cicer arietinum L. HOM05D005420 ORTHO05D006524 2.7e-54 216.5 225 58.7
AagrBONN_evm.TU.Sc2ySwM_228.1821 Anthoceros agrestis HOM05D005420 ORTHO05D006524 9.1e-47 191.4 120 79.2
Sed0016168 Sechium edule HOM05D005420 ORTHO05D006524 9.2e-39 164.9 90 93.3
MBI07_g42072_MAGBIO Magnolia biondii HOM05D005420 ORTHO05D006524 1.3e-37 161.0 89 89.9
CDE02G3676 Ceratophyllum demersum HOM05D005420 ORTHO05D006524 1.9e-36 157.1 223 47.1
Eucgr.L00810 Eucalyptus grandis HOM05D005420 ORTHO05D006524 6.8e-34 148.7 173 52.0
Eucgr.H01440 Eucalyptus grandis HOM05D005420 ORTHO05D006524 1.4e-31 141.0 173 50.3
Pp3c20_1670 Physcomitrium patens HOM05D005420 ORTHO05D006524 1.8e-31 140.6 158 48.7
MSTRG.9265 Avicennia marina HOM05D005420 ORTHO05D006524 6.2e-27 125.6 90 74.4
Lsat_1_v5_gn_1_75001 Lactuca sativa HOM05D005420 ORTHO05D006524 1.1e-23 114.8 78 71.8
Lsat_1_v5_gn_5_160100 Lactuca sativa HOM05D005420 ORTHO05D006524 4.6e-22 109.4 78 67.9
CBR_g10867 Chara braunii HOM05D005420 ORTHO05D006524 4.4e-17 92.8 53 79.2
Sed0003231 Sechium edule HOM05D005420 ORTHO05D006524 3.4e-09 66.6 75 53.3
Lalb_Chr18g0044971 Lupinus albus HOM05D005420 ORTHO05D006524 1.7e-08 64.3 57 57.9


User provided reference genes

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