Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4637 Salvia bowleyana HOM05D007889 ORTHO05D009987 1.0e-46 189.9 106 100.0
MSTRG.15685 Avicennia marina HOM05D007889 ORTHO05D009987 2.5e-29 132.1 90 78.9
Migut.K00803 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.9e-25 118.6 91 67.0
SGA_v2.0_scaffold195G40857 Striga asiatica HOM05D007889 ORTHO05D009987 4.1e-24 114.8 108 64.8
Oeu012264.1 Olea europaea HOM05D007889 ORTHO05D009987 6.0e-23 110.9 109 60.6
unitig_32.g11801 Utricularia gibba HOM05D007889 ORTHO05D009987 3.9e-22 108.2 91 68.1
Cc07_g14040 Coffea canephora HOM05D007889 ORTHO05D009987 1.5e-21 106.3 101 61.4
PGSC0003DMG402016199 Solanum tuberosum HOM05D007889 ORTHO05D009987 3.3e-21 105.1 96 61.5
CANSAT01G1217 Cannabis sativa HOM05D007889 ORTHO05D009987 1.2e-20 103.2 92 62.0
Solyc11g010680.4 Solanum lycopersicum HOM05D007889 ORTHO05D009987 1.2e-20 103.2 90 66.7
Sopen11g005480 Solanum pennellii HOM05D007889 ORTHO05D009987 1.2e-20 103.2 90 66.7
Manes.13G100900 Manihot esculenta HOM05D007889 ORTHO05D009987 2.1e-20 102.4 92 62.0
FAN28G0932 Fragaria x ananassa HOM05D007889 ORTHO05D009987 6.2e-20 100.9 91 62.6
FAN23G2864 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.4e-19 99.8 91 61.5
FAN26G2710 Fragaria x ananassa HOM05D007889 ORTHO05D009987 1.4e-19 99.8 91 61.5
FvH4_1g19600 Fragaria vesca HOM05D007889 ORTHO05D009987 2.3e-19 99.0 91 61.5
FAN19G1328 Fragaria x ananassa HOM05D007889 ORTHO05D009987 2.3e-19 99.0 91 61.5
Dinv36939 Davidia involucrata HOM05D007889 ORTHO05D009987 3.1e-19 98.6 92 59.8
Peaxi162Scf00474g00715 Petunia axillaris HOM05D007889 ORTHO05D009987 3.1e-19 98.6 82 69.5
Nitab4.5_0000902g0320 Nicotiana tabacum HOM05D007889 ORTHO05D009987 6.8e-19 97.4 90 57.8
THA.LOC109116914 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 8.9e-19 97.1 91 61.5
Nitab4.5_0007872g0020 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.5e-18 96.3 91 56.0
CiPaw.07G047100 Carya illinoinensis HOM05D007889 ORTHO05D009987 2.0e-18 95.9 92 58.7
Thecc.01G089900 Theobroma cacao HOM05D007889 ORTHO05D009987 2.0e-18 95.9 91 57.1
CSS0006316 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 2.6e-18 95.5 92 59.8
CSS0045661 Camellia sinensis var. sinensis HOM05D007889 ORTHO05D009987 2.6e-18 95.5 92 59.8
Nitab4.5_0006217g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 2.6e-18 95.5 87 63.2
Aa31LG1G16500 Aethionema arabicum HOM05D007889 ORTHO05D009987 3.4e-18 95.1 91 58.2
PGR102G1376 Punica granatum HOM05D007889 ORTHO05D009987 3.4e-18 95.1 98 58.2
RcHm_v2.0_Chr2g0111151 Rosa chinensis HOM05D007889 ORTHO05D009987 5.8e-18 94.4 96 57.3
AL8G43080 Arabidopsis lyrata HOM05D007889 ORTHO05D009987 7.5e-18 94.0 90 55.6
Manes.12G125800 Manihot esculenta HOM05D007889 ORTHO05D009987 9.8e-18 93.6 91 57.1
Atru.chr3.1237 Acer truncatum HOM05D007889 ORTHO05D009987 1.3e-17 93.2 92 56.5
BcaC01g02781 Brassica carinata HOM05D007889 ORTHO05D009987 1.3e-17 93.2 91 58.2
C03p60490 Brassica napus HOM05D007889 ORTHO05D009987 1.3e-17 93.2 91 58.2
BraA06t26160Z Brassica rapa HOM05D007889 ORTHO05D009987 1.3e-17 93.2 92 57.6
Nitab4.5_0006221g0010 Nicotiana tabacum HOM05D007889 ORTHO05D009987 1.3e-17 93.2 89 59.6
TWI77G0910 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 2.9e-17 92.0 94 57.4
AT5G65495 Arabidopsis thaliana HOM05D007889 ORTHO05D009987 3.7e-17 91.7 91 58.2
QL06p035849 Quercus lobata HOM05D007889 ORTHO05D009987 3.7e-17 91.7 97 54.6
TWI74G1088 Tripterygium wilfordii HOM05D007889 ORTHO05D009987 3.7e-17 91.7 92 60.9
Gohir.A02G144900 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.9e-17 91.3 91 56.0
Gohir.D03G035700 Gossypium hirsutum HOM05D007889 ORTHO05D009987 4.9e-17 91.3 91 56.0
Sp2g28580 Schrenkiella parvula HOM05D007889 ORTHO05D009987 4.9e-17 91.3 91 57.1
Thhalv10005325m.g Eutrema salsugineum HOM05D007889 ORTHO05D009987 6.4e-17 90.9 91 56.0
BolC3t18310H Brassica oleracea HOM05D007889 ORTHO05D009987 8.3e-17 90.5 91 57.1
Carub.0008s2635 Capsella rubella HOM05D007889 ORTHO05D009987 8.3e-17 90.5 91 57.1
Gorai.003G037300 Gossypium raimondii HOM05D007889 ORTHO05D009987 8.3e-17 90.5 91 56.0
Duzib147G1657 Durio zibethinus HOM05D007889 ORTHO05D009987 1.4e-16 89.7 91 57.1
ECA232G4810 Erigeron canadensis HOM05D007889 ORTHO05D009987 1.4e-16 89.7 91 53.8
Cpa.g.sc55.18 Carica papaya HOM05D007889 ORTHO05D009987 2.4e-16 89.0 68 70.6
Lsat_1_v5_gn_4_143420 Lactuca sativa HOM05D007889 ORTHO05D009987 7.1e-16 87.4 96 56.2
COL.COLO4_27358 Corchorus olitorius HOM05D007889 ORTHO05D009987 9.2e-16 87.0 93 55.9
THA.LOC109116122 Tarenaya hassleriana HOM05D007889 ORTHO05D009987 1.2e-15 86.7 91 57.1
Haze_03881 Corylus avellana HOM05D007889 ORTHO05D009987 2.1e-15 85.9 91 57.1
Actinidia25305 Actinidia chinensis HOM05D007889 ORTHO05D009987 7.8e-15 84.0 93 55.9
Ciclev10026840m.g Citrus clementina HOM05D007889 ORTHO05D009987 1.3e-14 83.2 92 52.2
Ah.02g123520 Amaranthus hybridus HOM05D007889 ORTHO05D009987 1.7e-14 82.8 98 53.1
Prupe.6G202300 Prunus persica HOM05D007889 ORTHO05D009987 6.6e-14 80.9 91 52.7
Lj4g0025467 Lotus japonicus HOM05D007889 ORTHO05D009987 1.1e-13 80.1 90 51.1
EL10Ac6g15200 Beta vulgaris HOM05D007889 ORTHO05D009987 1.5e-13 79.7 64 70.3
Ca_22615_v3 Cicer arietinum L. HOM05D007889 ORTHO05D009987 1.9e-13 79.3 91 54.9
Rhsim10G0173200 Rhododendron simsii HOM05D007889 ORTHO05D009987 5.6e-13 77.8 58 74.1
CsaV3_6G044960 Cucumis sativus L. HOM05D007889 ORTHO05D009987 9.5e-13 77.0 85 55.3
MELO3C032898.2 Cucumis melo HOM05D007889 ORTHO05D009987 1.2e-12 76.6 96 50.0
Eucgr.L00470 Eucalyptus grandis HOM05D007889 ORTHO05D009987 3.6e-12 75.1 67 62.7
Psat4g119800 Pisum sativum HOM05D007889 ORTHO05D009987 3.6e-12 75.1 69 62.3
Aqoxy5G01377 Aquilegia oxysepala HOM05D007889 ORTHO05D009987 1.8e-11 72.8 85 54.1
Eucgr.H04722 Eucalyptus grandis HOM05D007889 ORTHO05D009987 3.1e-11 72.0 94 50.0
Cfa006876 Carpinus fangiana HOM05D007889 ORTHO05D009987 1.2e-10 70.1 91 48.4
Medtr8g068560 Medicago truncatula HOM05D007889 ORTHO05D009987 2.0e-10 69.3 63 65.1
vmacro08762 Vaccinium macrocarpon HOM05D007889 ORTHO05D009987 5.8e-10 67.8 50 70.0
PSO541G6452 Papaver somniferum HOM05D007889 ORTHO05D009987 7.6e-10 67.4 93 47.3
AUR62003668 Chenopodium quinoa HOM05D007889 ORTHO05D009987 9.9e-10 67.0 95 45.3
Migut.H02288 Erythranthe guttata HOM05D007889 ORTHO05D009987 2.2e-09 65.9 82 46.3
Lalb_Chr05g0228531 Lupinus albus HOM05D007889 ORTHO05D009987 3.5e-07 58.5 53 62.3


User provided reference genes

Program Settings