Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4580 Salvia bowleyana HOM05D004485 ORTHO05D005485 3.1e-57 224.9 117 100.0
Nitab4.5_0013389g0010 Nicotiana tabacum HOM05D004485 ORTHO05D005485 1.2e-35 153.3 115 71.3
Oeu053166.1 Olea europaea HOM05D004485 ORTHO05D005485 5.7e-35 151.0 94 84.0
CAN.G1642.10 Capsicum annuum HOM05D004485 ORTHO05D005485 2.8e-34 148.7 115 69.6
Eucgr.C01004 Eucalyptus grandis HOM05D004485 ORTHO05D005485 4.9e-34 147.9 94 80.9
Dinv36695 Davidia involucrata HOM05D004485 ORTHO05D005485 6.3e-34 147.5 94 79.8
Migut.K00530 Erythranthe guttata HOM05D004485 ORTHO05D005485 8.3e-34 147.1 94 83.0
MD15G1195100 Malus domestica HOM05D004485 ORTHO05D005485 3.1e-33 145.2 93 80.6
Prupe.7G221400 Prunus persica HOM05D004485 ORTHO05D005485 5.4e-33 144.4 93 80.6
QL02p042072 Quercus lobata HOM05D004485 ORTHO05D005485 5.4e-33 144.4 93 79.6
CSS0002032 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 7.0e-33 144.1 94 79.8
CSS0009570 Camellia sinensis var. sinensis HOM05D004485 ORTHO05D005485 7.0e-33 144.1 94 79.8
Sabra18G0074900 Salix brachista HOM05D004485 ORTHO05D005485 7.0e-33 144.1 94 78.7
Cpa.g.sc40.65 Carica papaya HOM05D004485 ORTHO05D005485 1.2e-32 143.3 94 77.7
Nn8g39096 Nelumbo nucifera HOM05D004485 ORTHO05D005485 1.2e-32 143.3 94 77.7
Solyc12g008390.3 Solanum lycopersicum HOM05D004485 ORTHO05D005485 1.2e-32 143.3 114 69.3
Sopen12g003350 Solanum pennellii HOM05D004485 ORTHO05D005485 1.2e-32 143.3 114 69.3
FAN26G2333 Fragaria x ananassa HOM05D004485 ORTHO05D005485 1.6e-32 142.9 116 67.2
FvH4_1g05970 Fragaria vesca HOM05D004485 ORTHO05D005485 3.5e-32 141.7 116 66.4
FAN19G2910 Fragaria x ananassa HOM05D004485 ORTHO05D005485 3.5e-32 141.7 116 66.4
FAN26G0748 Fragaria x ananassa HOM05D004485 ORTHO05D005485 3.5e-32 141.7 116 66.4
Manes.16G110100 Manihot esculenta HOM05D004485 ORTHO05D005485 3.5e-32 141.7 94 75.5
Potri.018G086600 Populus trichocarpa HOM05D004485 ORTHO05D005485 3.5e-32 141.7 94 77.7
Actinidia17528 Actinidia chinensis HOM05D004485 ORTHO05D005485 5.9e-32 141.0 108 71.3
Ciclev10007632m.g Citrus clementina HOM05D004485 ORTHO05D005485 5.9e-32 141.0 91 81.3
Actinidia09445 Actinidia chinensis HOM05D004485 ORTHO05D005485 7.8e-32 140.6 94 76.6
Actinidia39785 Actinidia chinensis HOM05D004485 ORTHO05D005485 7.8e-32 140.6 94 76.6
MD02G1064300 Malus domestica HOM05D004485 ORTHO05D005485 7.8e-32 140.6 93 78.5
Rhsim05G0040900 Rhododendron simsii HOM05D004485 ORTHO05D005485 7.8e-32 140.6 116 65.5
RcHm_v2.0_Chr2g0091661 Rosa chinensis HOM05D004485 ORTHO05D005485 7.8e-32 140.6 93 77.4
Sed0011847 Sechium edule HOM05D004485 ORTHO05D005485 1.0e-31 140.2 108 70.4
CANSAT56G2449 Cannabis sativa HOM05D004485 ORTHO05D005485 1.3e-31 139.8 94 78.7
CiPaw.04G158800 Carya illinoinensis HOM05D004485 ORTHO05D005485 1.7e-31 139.4 92 79.3
COL.COLO4_34764 Corchorus olitorius HOM05D004485 ORTHO05D005485 1.7e-31 139.4 94 76.6
Glyma.16G077500 Glycine max HOM05D004485 ORTHO05D005485 1.7e-31 139.4 108 69.4
PSO210G4150 Papaver somniferum HOM05D004485 ORTHO05D005485 1.7e-31 139.4 94 74.5
TAR624G1325 Trochodendron aralioides HOM05D004485 ORTHO05D005485 1.7e-31 139.4 94 74.5
Atru.chr7.1446 Acer truncatum HOM05D004485 ORTHO05D005485 2.3e-31 139.0 95 77.9
Glyma.01G008900 Glycine max HOM05D004485 ORTHO05D005485 2.9e-31 138.7 108 69.4
Phvul.004G170300 Phaseolus vulgaris HOM05D004485 ORTHO05D005485 2.9e-31 138.7 94 72.3
MSTRG.26380 Avicennia marina HOM05D004485 ORTHO05D005485 3.8e-31 138.3 91 78.0
PGR102G0995 Punica granatum HOM05D004485 ORTHO05D005485 3.8e-31 138.3 93 75.3
Thecc.09G101900 Theobroma cacao HOM05D004485 ORTHO05D005485 3.8e-31 138.3 94 76.6
VMungo0464G1472 Vigna mungo HOM05D004485 ORTHO05D005485 5.0e-31 137.9 108 66.7
CsaV3_2G001970 Cucumis sativus L. HOM05D004485 ORTHO05D005485 6.6e-31 137.5 94 77.7
MBI07_g22518_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 8.6e-31 137.1 94 75.5
MBI07_g30871_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 8.6e-31 137.1 94 75.5
GSVIVG01015314001 Vitis vinifera HOM05D004485 ORTHO05D005485 8.6e-31 137.1 94 73.4
PSO210G3171 Papaver somniferum HOM05D004485 ORTHO05D005485 1.1e-30 136.7 94 73.4
THA.LOC104820040 Tarenaya hassleriana HOM05D004485 ORTHO05D005485 1.1e-30 136.7 94 74.5
Cc06_g10340 Coffea canephora HOM05D004485 ORTHO05D005485 1.9e-30 136.0 115 65.2
MELO3C004583.2 Cucumis melo HOM05D004485 ORTHO05D005485 1.9e-30 136.0 94 76.6
CiPaw.03G226100 Carya illinoinensis HOM05D004485 ORTHO05D005485 2.5e-30 135.6 92 76.1
arahy.Tifrunner.gnm1.ann1.TC5UZA Arachis hypogaea HOM05D004485 ORTHO05D005485 3.3e-30 135.2 113 64.6
TPR.G21387 Trifolium pratense HOM05D004485 ORTHO05D005485 3.3e-30 135.2 116 61.2
Ca_25562_v3 Cicer arietinum L. HOM05D004485 ORTHO05D005485 5.6e-30 134.4 93 74.2
Duzib168G0844 Durio zibethinus HOM05D004485 ORTHO05D005485 5.6e-30 134.4 94 73.4
ClCG11G002190 Citrullus lanatus HOM05D004485 ORTHO05D005485 9.5e-30 133.7 102 70.6
FAN23G2550 Fragaria x ananassa HOM05D004485 ORTHO05D005485 9.5e-30 133.7 126 61.1
FAN28G2435 Fragaria x ananassa HOM05D004485 ORTHO05D005485 9.5e-30 133.7 126 61.1
Os01g0744400 Oryza sativa ssp. japonica HOM05D004485 ORTHO05D005485 9.5e-30 133.7 93 73.1
HPP92_005563 Vanilla planifolia HOM05D004485 ORTHO05D005485 9.5e-30 133.7 116 60.3
Aqoxy7G03881 Aquilegia oxysepala HOM05D004485 ORTHO05D005485 1.2e-29 133.3 95 73.7
Duzib187G1416 Durio zibethinus HOM05D004485 ORTHO05D005485 1.2e-29 133.3 94 74.5
Lj2g0014691 Lotus japonicus HOM05D004485 ORTHO05D005485 1.2e-29 133.3 94 71.3
Gohir.D08G263700 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.6e-29 132.9 94 72.3
Lalb_Chr14g0371821 Lupinus albus HOM05D004485 ORTHO05D005485 1.6e-29 132.9 108 67.6
Medtr6g088595 Medicago truncatula HOM05D004485 ORTHO05D005485 1.6e-29 132.9 93 73.1
Gorai.004G281700 Gossypium raimondii HOM05D004485 ORTHO05D005485 2.1e-29 132.5 94 72.3
Lsat_1_v5_gn_8_96840 Lactuca sativa HOM05D004485 ORTHO05D005485 2.1e-29 132.5 93 69.9
Lalb_Chr24g0397331 Lupinus albus HOM05D004485 ORTHO05D005485 2.8e-29 132.1 93 73.1
unitig_899.g15433 Utricularia gibba HOM05D004485 ORTHO05D005485 2.8e-29 132.1 118 61.9
Psat1g046640 Pisum sativum HOM05D004485 ORTHO05D005485 3.6e-29 131.7 93 71.0
AL3G48250 Arabidopsis lyrata HOM05D004485 ORTHO05D005485 4.7e-29 131.3 105 66.7
ECA236G0540 Erigeron canadensis HOM05D004485 ORTHO05D005485 4.7e-29 131.3 94 69.1
AT2G19950 Arabidopsis thaliana HOM05D004485 ORTHO05D005485 6.1e-29 131.0 105 64.8
Gohir.A08G242800 Gossypium hirsutum HOM05D004485 ORTHO05D005485 6.1e-29 131.0 94 71.3
MBI01_g35400_MAGBIO Magnolia biondii HOM05D004485 ORTHO05D005485 8.0e-29 130.6 89 75.3
Carub.0003s3420 Capsella rubella HOM05D004485 ORTHO05D005485 1.0e-28 130.2 105 65.7
CDE04G3494 Ceratophyllum demersum HOM05D004485 ORTHO05D005485 1.0e-28 130.2 94 70.2
Zm00001eb371090 Zea mays HOM05D004485 ORTHO05D005485 1.4e-28 129.8 93 72.0
TWI34G0799 Tripterygium wilfordii HOM05D004485 ORTHO05D005485 1.8e-28 129.4 106 67.9
Zm00001eb153530 Zea mays HOM05D004485 ORTHO05D005485 2.3e-28 129.0 93 71.0
Sc08g0007920 Simmondsia chinensis HOM05D004485 ORTHO05D005485 3.0e-28 128.6 94 71.3
Thhalv10001922m.g Eutrema salsugineum HOM05D004485 ORTHO05D005485 4.0e-28 128.3 94 70.2
HanXRQChr12g0358161 Helianthus annuus HOM05D004485 ORTHO05D005485 4.0e-28 128.3 110 64.5
Sp3g33270 Schrenkiella parvula HOM05D004485 ORTHO05D005485 4.0e-28 128.3 94 69.1
EL10Ac8g18398 Beta vulgaris HOM05D004485 ORTHO05D005485 1.5e-27 126.3 93 71.0
Gohir.D06G065100 Gossypium hirsutum HOM05D004485 ORTHO05D005485 3.4e-27 125.2 94 70.2
Gorai.010G076200 Gossypium raimondii HOM05D004485 ORTHO05D005485 3.4e-27 125.2 94 70.2
Peaxi162Scf00665g00331 Petunia axillaris HOM05D004485 ORTHO05D005485 3.4e-27 125.2 78 82.1
CARHR110390 Cardamine hirsuta HOM05D004485 ORTHO05D005485 9.8e-27 123.6 108 62.0
C09p15010 Brassica napus HOM05D004485 ORTHO05D005485 1.3e-26 123.2 93 66.7
BolC9t54403H Brassica oleracea HOM05D004485 ORTHO05D005485 1.3e-26 123.2 93 66.7
Gohir.A06G066600 Gossypium hirsutum HOM05D004485 ORTHO05D005485 1.7e-26 122.9 94 69.1
BcaNung04089 Brassica carinata HOM05D004485 ORTHO05D005485 2.2e-26 122.5 93 65.6
Hund28808 Selenicereus undatus HOM05D004485 ORTHO05D005485 6.4e-26 120.9 93 69.9
Hund28810 Selenicereus undatus HOM05D004485 ORTHO05D005485 6.4e-26 120.9 93 69.9
Nitab4.5_0000566g0170 Nicotiana tabacum HOM05D004485 ORTHO05D005485 8.3e-26 120.6 115 60.9
A09p12650 Brassica napus HOM05D004485 ORTHO05D005485 1.1e-25 120.2 93 65.6
BraA09t36912Z Brassica rapa HOM05D004485 ORTHO05D005485 1.1e-25 120.2 93 65.6
Oeu064192.1 Olea europaea HOM05D004485 ORTHO05D005485 1.4e-25 119.8 79 79.7
AUR62021427 Chenopodium quinoa HOM05D004485 ORTHO05D005485 1.9e-25 119.4 90 67.8
ATR0705G155 Amborella trichopoda HOM05D004485 ORTHO05D005485 3.2e-25 118.6 95 64.2
arahy.Tifrunner.gnm1.ann1.8771PM Arachis hypogaea HOM05D004485 ORTHO05D005485 1.3e-23 113.2 139 50.4
Hma1.2p1_0571F.1_g180870 Hydrangea macrophylla HOM05D004485 ORTHO05D005485 1.3e-23 113.2 78 73.1
arahy.Tifrunner.gnm1.ann1.N3ID59 Arachis hypogaea HOM05D004485 ORTHO05D005485 1.7e-23 112.8 107 59.8
SGA_v2.0_scaffold129G34191 Striga asiatica HOM05D004485 ORTHO05D005485 5.0e-23 111.3 71 78.9
arahy.Tifrunner.gnm1.ann1.96JC9B Arachis hypogaea HOM05D004485 ORTHO05D005485 2.5e-22 109.0 82 67.1
Aa31LG8G16840 Aethionema arabicum HOM05D004485 ORTHO05D005485 1.2e-21 106.7 87 65.5
SEGI_40884 Sequoiadendron giganteum HOM05D004485 ORTHO05D005485 1.2e-21 106.7 94 60.6
Ah.14g083300 Amaranthus hybridus HOM05D004485 ORTHO05D005485 1.1e-12 77.0 94 45.7
AagrBONN_evm.TU.Sc2ySwM_368.430 Anthoceros agrestis HOM05D004485 ORTHO05D005485 2.9e-10 68.9 94 45.7
Haze_25812 Corylus avellana HOM05D004485 ORTHO05D005485 1.9e-09 66.2 45 68.9
Potri.006G164350 Populus trichocarpa HOM05D004485 ORTHO05D005485 3.2e-09 65.5 44 68.2
SMO140G0037 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 1.0e-07 60.5 70 54.3
SMO356G0242 Selaginella moellendorffii HOM05D004485 ORTHO05D005485 1.0e-07 60.5 70 54.3


User provided reference genes

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