Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4510 Salvia bowleyana HOM05D002419 ORTHO05D005441 7.6e-103 377.1 181 100.0
Migut.D02183 Erythranthe guttata HOM05D002419 ORTHO05D005441 2.3e-91 339.0 181 86.7
SGA_v2.0_scaffold61G21167 Striga asiatica HOM05D002419 ORTHO05D005441 3.4e-87 325.1 181 82.3
MSTRG.21143 Avicennia marina HOM05D002419 ORTHO05D005441 3.8e-86 321.6 176 81.8
Atru.chr3.3690 Acer truncatum HOM05D002419 ORTHO05D005441 3.3e-82 308.5 172 80.8
Nitab4.5_0002129g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 1.3e-81 306.6 177 80.2
Peaxi162Scf00389g00950 Petunia axillaris HOM05D002419 ORTHO05D005441 6.3e-81 304.3 177 78.5
Ciclev10029381m.g Citrus clementina HOM05D002419 ORTHO05D005441 1.8e-80 302.8 168 81.0
Potri.006G228500 Populus trichocarpa HOM05D002419 ORTHO05D005441 4.1e-80 301.6 181 76.8
QL01p037218 Quercus lobata HOM05D002419 ORTHO05D005441 4.1e-80 301.6 176 78.4
Potri.012G109400 Populus trichocarpa HOM05D002419 ORTHO05D005441 5.3e-80 301.2 171 78.9
Rhsim08G0250900 Rhododendron simsii HOM05D002419 ORTHO05D005441 5.3e-80 301.2 180 75.6
Manes.04G024900 Manihot esculenta HOM05D002419 ORTHO05D005441 1.2e-79 300.1 176 78.4
Cfa010014 Carpinus fangiana HOM05D002419 ORTHO05D005441 1.5e-79 299.7 176 79.0
Solyc11g072410.2 Solanum lycopersicum HOM05D002419 ORTHO05D005441 3.4e-79 298.5 177 75.7
GSVIVG01025135001 Vitis vinifera HOM05D002419 ORTHO05D005441 3.4e-79 298.5 176 76.7
LjContig00564g0008442 Lotus japonicus HOM05D002419 ORTHO05D005441 4.5e-79 298.1 172 80.2
Gohir.D08G057700 Gossypium hirsutum HOM05D002419 ORTHO05D005441 5.9e-79 297.7 176 78.4
Sopen11g030060 Solanum pennellii HOM05D002419 ORTHO05D005441 1.0e-78 297.0 177 75.1
Dinv32788 Davidia involucrata HOM05D002419 ORTHO05D005441 1.3e-78 296.6 166 80.1
PGSC0003DMG400027404 Solanum tuberosum HOM05D002419 ORTHO05D005441 1.3e-78 296.6 177 75.7
Gorai.004G058900 Gossypium raimondii HOM05D002419 ORTHO05D005441 1.7e-78 296.2 176 77.8
Sed0002828 Sechium edule HOM05D005177 ORTHO05D005441 1.7e-78 296.2 170 80.6
CSS0025233 Camellia sinensis var. sinensis HOM05D002419 ORTHO05D005441 2.2e-78 295.8 181 75.1
ClCG02G020950 Citrullus lanatus HOM05D002419 ORTHO05D005441 2.2e-78 295.8 167 80.2
Cc04_g16270 Coffea canephora HOM05D002419 ORTHO05D005441 2.2e-78 295.8 167 77.8
Oeu037230.1 Olea europaea HOM05D002419 ORTHO05D005441 2.9e-78 295.4 173 78.0
arahy.Tifrunner.gnm1.ann1.0PI3PU Arachis hypogaea HOM05D002419 ORTHO05D005441 8.5e-78 293.9 167 79.0
CsaV3_6G021640 Cucumis sativus L. HOM05D002419 ORTHO05D005441 8.5e-78 293.9 170 78.2
Gohir.A08G047300 Gossypium hirsutum HOM05D002419 ORTHO05D005441 8.5e-78 293.9 176 76.7
Hma1.2p1_0958F.1_g241480 Hydrangea macrophylla HOM05D002419 ORTHO05D005441 8.5e-78 293.9 168 79.2
arahy.Tifrunner.gnm1.ann1.LS5S44 Arachis hypogaea HOM05D002419 ORTHO05D005441 1.1e-77 293.5 167 78.4
arahy.Tifrunner.gnm1.ann1.P2RDRN Arachis hypogaea HOM05D002419 ORTHO05D005441 1.1e-77 293.5 167 78.4
DCAR_006045 Daucus carota HOM05D002419 ORTHO05D005441 1.1e-77 293.5 169 75.7
Thecc.01G220900 Theobroma cacao HOM05D002419 ORTHO05D005441 1.1e-77 293.5 167 77.8
TPR.G1260 Trifolium pratense HOM05D002419 ORTHO05D005441 1.1e-77 293.5 177 76.8
CiPaw.13G107100 Carya illinoinensis HOM05D002419 ORTHO05D005441 1.4e-77 293.1 176 76.1
Lsat_1_v5_gn_6_26220 Lactuca sativa HOM05D002419 ORTHO05D005441 1.4e-77 293.1 168 76.2
PGR119G1746 Punica granatum HOM05D002419 ORTHO05D005441 1.4e-77 293.1 168 76.8
Eucgr.J00952 Eucalyptus grandis HOM05D002419 ORTHO05D005441 1.9e-77 292.7 167 77.2
TAR623G1637 Trochodendron aralioides HOM05D002419 ORTHO05D005441 1.9e-77 292.7 176 75.6
Lalb_Chr10g0105941 Lupinus albus HOM05D002419 ORTHO05D005441 2.5e-77 292.4 169 78.7
CDE02G0876 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 4.2e-77 291.6 170 74.7
MELO3C025747.2 Cucumis melo HOM05D002419 ORTHO05D005441 4.2e-77 291.6 167 78.4
FvH4_5g29720 Fragaria vesca HOM05D002419 ORTHO05D005441 4.2e-77 291.6 166 80.1
FAN18G2638 Fragaria x ananassa HOM05D002419 ORTHO05D005441 4.2e-77 291.6 166 80.1
MD10G1078500 Malus domestica HOM05D002419 ORTHO05D005441 4.2e-77 291.6 166 78.9
Cpa.g.sc8.318 Carica papaya HOM05D002419 ORTHO05D005441 7.2e-77 290.8 171 77.2
Medtr5g087910 Medicago truncatula HOM05D002419 ORTHO05D005441 7.2e-77 290.8 168 78.0
COL.COLO4_15624 Corchorus olitorius HOM05D002419 ORTHO05D005441 1.2e-76 290.0 167 77.8
Duzib138G1011 Durio zibethinus HOM05D002419 ORTHO05D005441 1.2e-76 290.0 167 77.2
Glyma.02G076000 Glycine max HOM05D002419 ORTHO05D005441 2.1e-76 289.3 177 75.1
PSO339G1519 Papaver somniferum HOM05D002419 ORTHO05D005441 2.1e-76 289.3 169 74.6
TPR.G11323 Trifolium pratense HOM05D002419 ORTHO05D005441 2.1e-76 289.3 177 75.7
Ah.13g070120 Amaranthus hybridus HOM05D002419 ORTHO05D005441 2.7e-76 288.9 166 77.1
Aqoxy5G03165 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 2.7e-76 288.9 169 75.7
FAN13G2429 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.7e-76 288.9 166 79.5
Haze_23372 Corylus avellana HOM05D002419 ORTHO05D005441 4.7e-76 288.1 187 73.3
CANSAT54G0974 Cannabis sativa HOM05D002419 ORTHO05D005441 6.1e-76 287.7 168 76.8
Duzib211G0640 Durio zibethinus HOM05D002419 ORTHO05D005441 6.1e-76 287.7 167 76.0
Glyma.16G158000 Glycine max HOM05D002419 ORTHO05D005441 6.1e-76 287.7 177 74.0
Lj1g0007529 Lotus japonicus HOM05D002419 ORTHO05D005441 6.1e-76 287.7 178 75.3
Phvul.004G086200 Phaseolus vulgaris HOM05D002419 ORTHO05D005441 6.1e-76 287.7 180 73.3
EL10Ac5g12738 Beta vulgaris HOM05D002419 ORTHO05D005441 7.9e-76 287.3 166 77.1
RcHm_v2.0_Chr7g0223211 Rosa chinensis HOM05D002419 ORTHO05D005441 1.0e-75 287.0 166 78.3
PSO541G3116 Papaver somniferum HOM05D002419 ORTHO05D005441 1.4e-75 286.6 170 75.3
PSO675G4527 Papaver somniferum HOM05D002419 ORTHO05D005441 1.4e-75 286.6 170 75.3
VMungo0245G0001 Vigna mungo HOM05D002419 ORTHO05D005441 1.4e-75 286.6 168 76.8
Prupe.1G205700 Prunus persica HOM05D002419 ORTHO05D005441 1.8e-75 286.2 166 76.5
BcaB08g36334 Brassica carinata HOM05D002419 ORTHO05D005441 2.3e-75 285.8 175 74.9
Oeu005909.2 Olea europaea HOM05D002419 ORTHO05D005441 2.3e-75 285.8 166 78.9
Hund28200 Selenicereus undatus HOM05D002419 ORTHO05D005441 2.3e-75 285.8 167 76.0
Hund28212 Selenicereus undatus HOM05D002419 ORTHO05D005441 2.3e-75 285.8 167 76.0
TWI31G0524 Tripterygium wilfordii HOM05D002419 ORTHO05D005441 2.3e-75 285.8 167 77.2
Aqoxy5G00056 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 3.0e-75 285.4 176 73.9
AUR62019559 Chenopodium quinoa HOM05D002419 ORTHO05D005441 3.0e-75 285.4 166 74.7
Duzib211G0283 Durio zibethinus HOM05D002419 ORTHO05D005441 3.0e-75 285.4 167 76.0
ECA233G1138 Erigeron canadensis HOM05D002419 ORTHO05D005441 3.0e-75 285.4 168 74.4
FAN04G1346 Fragaria x ananassa HOM05D002419 ORTHO05D005441 3.9e-75 285.0 166 78.3
Prupe.8G100300 Prunus persica HOM05D002419 ORTHO05D005441 3.9e-75 285.0 166 77.1
Rhsim01G0220200 Rhododendron simsii HOM05D002419 ORTHO05D005441 5.1e-75 284.6 213 64.3
Actinidia03746 Actinidia chinensis HOM05D005177 ORTHO05D006175 6.7e-75 284.3 176 73.9
BcaC04g19694 Brassica carinata HOM05D002419 ORTHO05D005441 6.7e-75 284.3 176 73.3
CDE06G2731 Ceratophyllum demersum HOM05D002419 ORTHO05D005441 1.1e-74 283.5 168 73.2
Ca_01433_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 1.1e-74 283.5 180 72.8
HanXRQChr13g0401511 Helianthus annuus HOM05D002419 ORTHO05D005441 1.5e-74 283.1 168 74.4
Os07g0412400 Oryza sativa ssp. japonica HOM05D002419 ORTHO05D005441 1.5e-74 283.1 176 72.2
Ca_11594_v3 Cicer arietinum L. HOM05D002419 ORTHO05D005441 2.0e-74 282.7 180 72.8
FAN08G2817 Fragaria x ananassa HOM05D002419 ORTHO05D005441 2.0e-74 282.7 164 79.3
Zm00001eb305840 Zea mays HOM05D002419 ORTHO05D005441 2.6e-74 282.3 176 72.2
Sp6g21950 Schrenkiella parvula HOM05D002419 ORTHO05D005441 4.4e-74 281.6 168 74.4
BcaC02g12517 Brassica carinata HOM05D002419 ORTHO05D005441 5.7e-74 281.2 168 74.4
C03p12900 Brassica napus HOM05D002419 ORTHO05D005441 5.7e-74 281.2 169 75.7
BcaB01g04654 Brassica carinata HOM05D002419 ORTHO05D005441 7.4e-74 280.8 176 73.9
Thhalv10014819m.g Eutrema salsugineum HOM05D002419 ORTHO05D005441 9.7e-74 280.4 168 75.6
THA.LOC104814839 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 9.7e-74 280.4 177 73.4
Sc06g0010580 Simmondsia chinensis HOM05D002419 ORTHO05D005441 1.3e-73 280.0 169 73.4
ATR0564G250 Amborella trichopoda HOM05D002419 ORTHO05D005441 1.7e-73 279.6 176 69.9
MBI18_g31602_MAGBIO Magnolia biondii HOM05D002419 ORTHO05D005441 2.2e-73 279.3 166 74.7
BolC3t13754H Brassica oleracea HOM05D002419 ORTHO05D005441 2.8e-73 278.9 169 75.1
BolC4t26562H Brassica oleracea HOM05D002419 ORTHO05D005441 2.8e-73 278.9 169 74.0
Psat2g022600 Pisum sativum HOM05D002419 ORTHO05D005441 4.8e-73 278.1 166 75.9
BraA03t10433Z Brassica rapa HOM05D002419 ORTHO05D005441 1.8e-72 276.2 168 73.8
VMungo1080G0265 Vigna mungo HOM05D002419 ORTHO05D005441 3.1e-72 275.4 169 71.6
A03p11170 Brassica napus HOM05D002419 ORTHO05D005441 7.0e-72 274.2 168 73.2
vmacro14463 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 1.2e-71 273.5 241 57.3
CARHR274010 Cardamine hirsuta HOM05D002419 ORTHO05D005441 1.5e-71 273.1 176 71.0
CAN.G1839.8 Capsicum annuum HOM05D002419 ORTHO05D005441 2.6e-71 272.3 167 72.5
C09p52960 Brassica napus HOM05D002419 ORTHO05D005441 7.7e-71 270.8 168 74.4
BolC9t58170H Brassica oleracea HOM05D002419 ORTHO05D005441 7.7e-71 270.8 168 74.4
THA.LOC104799485 Tarenaya hassleriana HOM05D002419 ORTHO05D005441 7.7e-71 270.8 164 75.0
AL8G36960 Arabidopsis lyrata HOM05D002419 ORTHO05D005441 1.0e-70 270.4 172 69.8
BcaC08g46529 Brassica carinata HOM05D002419 ORTHO05D005441 1.0e-70 270.4 169 72.2
BraA10t43836Z Brassica rapa HOM05D002419 ORTHO05D005441 1.0e-70 270.4 168 73.8
Carub.0003s2777 Capsella rubella HOM05D002419 ORTHO05D005441 1.0e-70 270.4 173 69.4
A10p17550 Brassica napus HOM05D002419 ORTHO05D005441 1.3e-70 270.0 168 73.8
Nitab4.5_0000106g0060 Nicotiana tabacum HOM05D002419 ORTHO05D005441 1.3e-70 270.0 177 70.1
HPP92_005091 Vanilla planifolia HOM05D002419 ORTHO05D005441 3.2e-69 265.4 172 69.8
Peaxi162Scf00101g01011 Petunia axillaris HOM05D002419 ORTHO05D005441 5.5e-69 264.6 177 68.4
AUR62037871 Chenopodium quinoa HOM05D002419 ORTHO05D005441 1.2e-68 263.5 154 76.0
SEGI_39229 Sequoiadendron giganteum HOM05D002419 ORTHO05D005441 2.1e-68 262.7 169 68.0
AT5G60340 Arabidopsis thaliana HOM05D002419 ORTHO05D005441 8.0e-68 260.8 176 67.0
Aa31LG1G12400 Aethionema arabicum HOM05D002419 ORTHO05D005441 5.7e-66 254.6 160 75.6
PGSC0003DMG400007496 Solanum tuberosum HOM05D002419 ORTHO05D005441 2.8e-65 252.3 183 66.1
TAR369G1020 Trochodendron aralioides HOM05D002419 ORTHO05D005441 3.7e-65 251.9 181 67.4
Pp3c13_9300 Physcomitrium patens HOM05D002419 ORTHO05D005441 6.3e-65 251.1 170 64.7
AagrBONN_evm.TU.Sc2ySwM_344.3388 Anthoceros agrestis HOM05D002419 ORTHO05D005441 2.6e-63 245.7 164 64.6
Sopen06g031710 Solanum pennellii HOM05D002419 ORTHO05D005441 3.5e-63 245.4 177 65.0
CBR_g24285 Chara braunii HOM05D002419 ORTHO05D005441 5.0e-62 241.5 160 66.9
Cre02.g081550 Chlamydomonas reinhardtii HOM05D002419 ORTHO05D005441 1.8e-59 233.0 167 62.9
Haze_23913 Corylus avellana HOM05D002419 ORTHO05D005441 1.2e-58 230.3 168 63.7
Mapoly0012s0053 Marchantia polymorpha HOM05D002419 ORTHO05D005441 1.5e-58 229.9 160 63.8
SMO367G1131 Selaginella moellendorffii HOM05D002419 ORTHO05D005441 1.7e-57 226.5 161 62.1
SHI24546 Sapria himalayana HOM05D002419 ORTHO05D005441 8.3e-57 224.2 169 60.9
PRCOL_00000283 Prasinoderma coloniale HOM05D002419 ORTHO05D005441 5.5e-53 211.5 167 55.7
Nn1g08940 Nelumbo nucifera HOM05D002419 ORTHO05D005441 4.4e-50 201.8 117 79.5
unitig_736.g22419 Utricularia gibba HOM05D002419 ORTHO05D005441 2.7e-47 192.6 178 56.2
Nitab4.5_0001802g0070 Nicotiana tabacum HOM05D006502 ORTHO05D007704 3.5e-47 192.2 110 74.5
Glyma.10G187200 Glycine max HOM05D002419 ORTHO05D005441 1.0e-46 190.7 123 70.7
Nn5g28456 Nelumbo nucifera HOM05D002419 ORTHO05D005441 5.5e-45 184.9 108 75.0
Aqoxy6G01924 Aquilegia oxysepala HOM05D002419 ORTHO05D005441 7.2e-45 184.5 119 71.4
MCO01G137 Micromonas commoda HOM05D002419 ORTHO05D005441 2.3e-43 179.5 174 50.0
CAN.G553.11 Capsicum annuum HOM05D002419 ORTHO05D005441 3.4e-42 175.6 100 75.0
Solyc06g075310.4 Solanum lycopersicum HOM05D002419 ORTHO05D005441 3.4e-42 175.6 118 72.0
Dinv24670 Davidia involucrata HOM05D002419 ORTHO05D005441 2.2e-41 172.9 99 76.8
CAN.G6400.1 Capsicum annuum HOM05D002419 ORTHO05D005441 1.8e-40 169.9 100 73.0
CAN.G1001.14 Capsicum annuum HOM05D002419 ORTHO05D005441 4.1e-40 168.7 106 68.9
CAN.G1001.18 Capsicum annuum HOM05D002419 ORTHO05D005441 4.1e-40 168.7 106 68.9
QL08p054546 Quercus lobata HOM05D002419 ORTHO05D005441 2.3e-38 162.9 176 51.7
AagrBONN_evm.TU.Sc2ySwM_228.4581 Anthoceros agrestis HOM05D002419 ORTHO05D005441 7.3e-37 157.9 103 67.0
Aa31LG4G12680 Aethionema arabicum HOM05D002419 ORTHO05D005441 8.0e-36 154.5 85 82.4
CAN.G352.38 Capsicum annuum HOM05D002419 ORTHO05D005441 2.4e-32 142.9 176 46.0
arahy.Tifrunner.gnm1.ann1.VN8392 Arachis hypogaea HOM05D002419 ORTHO05D005441 3.1e-27 125.9 73 75.3
Peaxi162Scf00101g00114 Petunia axillaris HOM05D002419 ORTHO05D005441 5.2e-27 125.2 123 53.7
Haze_26704 Corylus avellana HOM05D002419 ORTHO05D164840 7.5e-26 121.3 157 37.6
arahy.Tifrunner.gnm1.ann1.9EY0GB Arachis hypogaea HOM05D002419 ORTHO05D005441 2.9e-25 119.4 138 50.0
vmacro14073 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 1.5e-18 97.1 63 65.1
HPP92_005089 Vanilla planifolia HOM05D002419 ORTHO05D005441 9.9e-18 94.4 67 68.7
Cfa024491 Carpinus fangiana HOM05D002419 ORTHO05D126234 1.7e-17 93.6 181 31.5
PGSC0003DMG400008253 Solanum tuberosum HOM05D002419 ORTHO05D030681 5.4e-16 88.6 60 66.7
PGSC0003DMG400035128 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.7e-14 83.6 70 60.0
SHI24547 Sapria himalayana HOM05D002419 ORTHO05D005441 5.1e-14 82.0 79 49.4
PGSC0003DMG400039134 Solanum tuberosum HOM05D002419 ORTHO05D030681 1.5e-13 80.5 61 67.2
Actinidia21172 Actinidia chinensis HOM05D002419 ORTHO05D055483 5.8e-10 68.6 35 82.9
vmacro14074 Vaccinium macrocarpon HOM05D002419 ORTHO05D005441 8.4e-09 64.7 60 60.0


User provided reference genes

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