Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 4.5e-72 274.6 152 100.0
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 7.5e-35 151.0 175 54.9
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 8.5e-31 137.5 170 52.9
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 8.5e-31 137.5 170 52.9
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 8.5e-31 137.5 170 52.9
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 1.9e-30 136.3 172 53.5
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.9e-30 136.3 168 54.8
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 4.0e-28 128.6 100 73.0
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 5.2e-28 128.3 104 70.2
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 6.8e-28 127.9 151 57.6
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 8.8e-28 127.5 103 68.9
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 8.8e-28 127.5 100 71.0
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 2.6e-27 125.9 133 60.2
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 4.4e-27 125.2 147 54.4
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 5.7e-27 124.8 104 68.3
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 7.5e-27 124.4 157 52.9
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 7.5e-27 124.4 146 54.1
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 7.5e-27 124.4 173 49.7
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 7.5e-27 124.4 139 54.0
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 1.3e-26 123.6 90 75.6
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 1.3e-26 123.6 92 75.0
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 2.2e-26 122.9 106 67.0
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 2.2e-26 122.9 135 56.3
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 2.8e-26 122.5 144 53.5
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 2.8e-26 122.5 113 64.6
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 3.7e-26 122.1 166 48.8
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 3.7e-26 122.1 156 53.8
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 4.8e-26 121.7 86 77.9
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 4.8e-26 121.7 86 77.9
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 4.8e-26 121.7 146 54.1
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 6.3e-26 121.3 74 86.5
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 1.4e-25 120.2 182 44.0
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 1.8e-25 119.8 115 62.6
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 2.4e-25 119.4 104 65.4
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 2.4e-25 119.4 89 74.2
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 2.4e-25 119.4 145 53.8
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 3.1e-25 119.0 103 66.0
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 3.1e-25 119.0 128 59.4
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 5.4e-25 118.2 155 51.6
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 5.4e-25 118.2 88 73.9
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 5.4e-25 118.2 133 54.9
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 7.0e-25 117.9 149 50.3
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 9.1e-25 117.5 170 49.4
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 9.1e-25 117.5 97 69.1
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 9.1e-25 117.5 172 51.2
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 9.1e-25 117.5 94 70.2
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.2e-24 117.1 91 69.2
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.2e-24 117.1 91 69.2
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 1.6e-24 116.7 107 65.4
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 1.6e-24 116.7 94 69.1
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 2.0e-24 116.3 149 51.7
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.7e-24 115.9 149 51.7
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 2.7e-24 115.9 130 57.7
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 3.5e-24 115.5 159 50.3
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 3.5e-24 115.5 148 52.0
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 4.5e-24 115.2 98 67.3
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 4.5e-24 115.2 104 62.5
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 4.5e-24 115.2 109 64.2
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 4.5e-24 115.2 146 51.4
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 4.5e-24 115.2 140 52.9
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 5.9e-24 114.8 125 56.0
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 5.9e-24 114.8 125 56.0
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 5.9e-24 114.8 135 54.1
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 7.7e-24 114.4 173 51.4
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 1.0e-23 114.0 138 55.8
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 1.0e-23 114.0 176 46.6
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 1.0e-23 114.0 149 51.0
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 1.7e-23 113.2 170 47.6
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 1.7e-23 113.2 176 45.5
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 1.7e-23 113.2 133 55.6
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 2.9e-23 112.5 157 51.0
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 3.8e-23 112.1 177 45.8
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 5.0e-23 111.7 105 62.9
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 8.5e-23 110.9 146 50.7
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 8.5e-23 110.9 92 66.3
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 8.5e-23 110.9 116 57.8
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 1.1e-22 110.5 81 74.1
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.2e-22 109.0 167 51.5
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 3.2e-22 109.0 92 68.5
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 4.2e-22 108.6 106 61.3
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 5.5e-22 108.2 69 79.7
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 7.2e-22 107.8 82 70.7
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 1.2e-21 107.1 174 43.7
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.6e-21 106.7 65 81.5
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 1.6e-21 106.7 159 47.8
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 1.6e-21 106.7 159 47.8
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 2.8e-21 105.9 178 44.4
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 2.8e-21 105.9 71 78.9
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 2.3e-20 102.8 82 68.3
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 3.0e-20 102.4 73 74.0
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 6.8e-20 101.3 169 47.3
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 1.2e-19 100.5 76 72.4
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 2.6e-19 99.4 79 70.9
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 9.8e-19 97.4 62 79.0
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 9.8e-19 97.4 129 48.8
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 9.8e-19 97.4 97 55.7
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 1.2e-16 90.5 141 41.1
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.7e-15 86.7 60 68.3
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.5e-11 73.6 94 46.8
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 4.4e-11 72.0 162 38.3
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 9.8e-11 70.9 103 46.6
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 1.7e-10 70.1 108 42.6
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.6e-08 63.5 73 52.1
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 3.0e-07 59.3 109 38.5
CDE07G0184 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 1.5e-06 57.0 36 77.8


User provided reference genes

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