Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4461 Salvia bowleyana HOM05D005795 ORTHO05D007200 6.6e-161 570.9 333 100.0
MSTRG.9769 Avicennia marina HOM05D005795 ORTHO05D007200 4.3e-120 435.3 326 79.1
SGA_v2.0_scaffold136G34981 Striga asiatica HOM05D005795 ORTHO05D007200 1.4e-113 413.7 334 74.3
Peaxi162Scf00375g00059 Petunia axillaris HOM05D005795 ORTHO05D007200 5.3e-110 401.7 320 73.4
SGA_v2.0_scaffold375G50253 Striga asiatica HOM05D005795 ORTHO05D007200 9.1e-110 401.0 334 72.5
Migut.G00958 Erythranthe guttata HOM05D005795 ORTHO05D007200 3.4e-109 399.1 339 73.7
Rhsim02G0076300 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.0e-108 397.5 324 67.6
Dinv44196 Davidia involucrata HOM05D005795 ORTHO05D007200 1.4e-107 393.7 326 71.2
Actinidia11305 Actinidia chinensis HOM05D005795 ORTHO05D007200 7.2e-107 391.3 325 72.0
Actinidia35971 Actinidia chinensis HOM05D005795 ORTHO05D007200 1.4e-105 387.1 326 67.8
CSS0047301 Camellia sinensis var. sinensis HOM05D005795 ORTHO05D007200 1.4e-105 387.1 325 69.8
Cc08_g05980 Coffea canephora HOM05D005795 ORTHO05D007200 1.2e-101 374.0 325 68.6
CiPaw.01G101200 Carya illinoinensis HOM05D005795 ORTHO05D007200 2.9e-100 369.4 328 67.7
Cc05_g13970 Coffea canephora HOM05D005795 ORTHO05D007200 1.1e-99 367.5 325 68.0
arahy.Tifrunner.gnm1.ann1.LQCR4Y Arachis hypogaea HOM05D005795 ORTHO05D007200 7.2e-99 364.8 327 62.7
Cfa015145 Carpinus fangiana HOM05D005795 ORTHO05D007200 2.1e-98 363.2 327 68.8
Sabra07G0103500 Salix brachista HOM05D005795 ORTHO05D007200 3.6e-98 362.5 324 65.4
Thecc.04G314000 Theobroma cacao HOM05D005795 ORTHO05D007200 8.0e-98 361.3 325 66.5
ClCG07G015610 Citrullus lanatus HOM05D005795 ORTHO05D007200 1.8e-97 360.1 323 66.9
Haze_01529 Corylus avellana HOM05D005795 ORTHO05D007200 1.8e-97 360.1 326 66.9
Lsat_1_v5_gn_6_55280 Lactuca sativa HOM05D005795 ORTHO05D007200 3.0e-97 359.4 348 58.0
Ciclev10021008m.g Citrus clementina HOM05D005795 ORTHO05D007200 5.2e-97 358.6 327 64.2
Duzib212G0505 Durio zibethinus HOM05D005795 ORTHO05D007200 8.8e-97 357.8 316 67.7
THA.LOC104803670 Tarenaya hassleriana HOM05D005795 ORTHO05D007200 1.1e-96 357.5 324 68.2
Manes.04G041300 Manihot esculenta HOM05D005795 ORTHO05D007200 2.6e-96 356.3 330 65.2
COL.COLO4_21665 Corchorus olitorius HOM05D005795 ORTHO05D007200 5.7e-96 355.1 325 68.0
ECA233G5655 Erigeron canadensis HOM05D005795 ORTHO05D007200 7.4e-96 354.8 327 63.0
EL10Ac3g05921 Beta vulgaris HOM05D005795 ORTHO05D007200 9.7e-96 354.4 326 67.2
Sopen06g029770 Solanum pennellii HOM05D005795 ORTHO05D007200 2.2e-95 353.2 325 67.1
CANSAT78G1297 Cannabis sativa HOM05D005795 ORTHO05D007200 2.8e-95 352.8 323 61.6
PSO675G7496 Papaver somniferum HOM05D005795 ORTHO05D007200 3.7e-95 352.4 328 68.3
Lalb_Chr22g0352181 Lupinus albus HOM05D005795 ORTHO05D007200 4.8e-95 352.1 324 64.2
Glyma.15G030700 Glycine max HOM05D005795 ORTHO05D007200 8.2e-95 351.3 335 62.7
Gohir.D05G287100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 2.4e-94 349.7 314 69.4
PGR083G1909 Punica granatum HOM05D005795 ORTHO05D007200 2.4e-94 349.7 329 66.3
VMungo1080G0355 Vigna mungo HOM05D005795 ORTHO05D007200 2.4e-94 349.7 341 62.2
Lsat_1_v5_gn_9_14160 Lactuca sativa HOM05D005795 ORTHO05D007200 3.1e-94 349.4 348 56.3
Solyc06g073390.3 Solanum lycopersicum HOM05D005795 ORTHO05D007200 3.1e-94 349.4 325 66.8
Gorai.009G302100 Gossypium raimondii HOM05D005795 ORTHO05D007200 5.3e-94 348.6 314 69.1
PSO732G0188 Papaver somniferum HOM05D005795 ORTHO05D007200 5.3e-94 348.6 326 66.3
HanXRQChr07g0186111 Helianthus annuus HOM05D005795 ORTHO05D007200 9.1e-94 347.8 328 57.6
TWI38G2022 Tripterygium wilfordii HOM05D005795 ORTHO05D007200 3.5e-93 345.9 324 64.5
Gohir.A05G286100 Gossypium hirsutum HOM05D005795 ORTHO05D007200 7.7e-93 344.7 314 68.8
MELO3C017720.2 Cucumis melo HOM05D005795 ORTHO05D007200 1.3e-92 344.0 320 65.0
CsaV3_4G003310 Cucumis sativus L. HOM05D005795 ORTHO05D007200 3.8e-92 342.4 320 65.3
Lj6A56T30 Lonicera japonica HOM05D005795 ORTHO05D007200 5.0e-92 342.0 325 65.2
HPP92_013540 Vanilla planifolia HOM05D005795 ORTHO05D007200 5.0e-92 342.0 324 57.1
ATR0743G276 Amborella trichopoda HOM05D005795 ORTHO05D007200 6.5e-92 341.7 327 66.4
Ca_01264_v3 Cicer arietinum L. HOM05D005795 ORTHO05D007200 6.5e-92 341.7 330 61.2
PGSC0003DMG400027009 Solanum tuberosum HOM05D005795 ORTHO05D007200 6.5e-92 341.7 328 64.6
AT3G59380 Arabidopsis thaliana HOM05D005795 ORTHO05D007200 1.9e-91 340.1 320 66.9
Nn1g09576 Nelumbo nucifera HOM05D005795 ORTHO05D007200 3.2e-91 339.3 326 62.9
Aa31LG10G13730 Aethionema arabicum HOM05D005795 ORTHO05D007200 5.5e-91 338.6 326 66.3
CARHR169760 Cardamine hirsuta HOM05D005795 ORTHO05D007200 7.2e-91 338.2 319 64.9
vmacro15646 Vaccinium macrocarpon HOM05D005795 ORTHO05D007200 2.1e-90 336.7 346 50.0
AL5G41280 Arabidopsis lyrata HOM05D005795 ORTHO05D007200 2.7e-90 336.3 320 66.9
Medtr2g098650 Medicago truncatula HOM05D005795 ORTHO05D007200 2.7e-90 336.3 330 60.6
Hund03150 Selenicereus undatus HOM05D005795 ORTHO05D007200 3.6e-90 335.9 324 62.3
Glyma.13G343600 Glycine max HOM05D005795 ORTHO05D007200 2.3e-89 333.2 358 53.9
RcHm_v2.0_Chr4g0407031 Rosa chinensis HOM05D005795 ORTHO05D007200 2.3e-89 333.2 323 63.2
Lj3g0002937 Lotus japonicus HOM05D005795 ORTHO05D007200 4.0e-89 332.4 323 62.5
unitig_22.g5744 Utricularia gibba HOM05D005795 ORTHO05D007200 4.0e-89 332.4 330 62.7
Sed0015939 Sechium edule HOM05D005795 ORTHO05D007200 1.2e-88 330.9 317 62.1
DCAR_003909 Daucus carota HOM05D005795 ORTHO05D007200 7.5e-88 328.2 324 59.3
C01p27420 Brassica napus HOM05D005795 ORTHO05D007200 2.8e-87 326.2 318 65.7
AUR62002291 Chenopodium quinoa HOM05D005795 ORTHO05D007200 2.8e-87 326.2 326 64.1
Carub.0005s2612 Capsella rubella HOM05D005795 ORTHO05D007200 6.3e-87 325.1 320 64.7
Thhalv10025709m.g Eutrema salsugineum HOM05D005795 ORTHO05D007200 8.3e-87 324.7 323 63.5
AUR62015400 Chenopodium quinoa HOM05D005795 ORTHO05D007200 1.1e-86 324.3 325 62.2
FAN07G0438 Fragaria x ananassa HOM05D005795 ORTHO05D007200 1.2e-85 320.9 321 61.1
Cpa.g.sc41.30 Carica papaya HOM05D005795 ORTHO05D007200 1.6e-85 320.5 325 64.0
FvH4_4g10680 Fragaria vesca HOM05D005795 ORTHO05D007200 2.7e-85 319.7 321 61.4
GSVIVG01010747001 Vitis vinifera HOM05D005795 ORTHO05D007200 3.5e-85 319.3 326 62.3
Zm00001eb102710 Zea mays HOM05D005795 ORTHO05D007200 1.5e-83 313.9 311 63.3
Os09g0514400 Oryza sativa ssp. japonica HOM05D005795 ORTHO05D007200 1.9e-83 313.5 331 61.6
QL10p048508 Quercus lobata HOM05D005795 ORTHO05D007200 2.5e-83 313.2 325 61.2
Ah.13g072920 Amaranthus hybridus HOM05D005795 ORTHO05D007200 1.8e-81 307.0 326 54.0
Atru.chr3.1532 Acer truncatum HOM05D005795 ORTHO05D007200 2.3e-81 306.6 325 59.7
Atru.chr3.1535 Acer truncatum HOM05D005795 ORTHO05D007200 2.3e-81 306.6 325 59.7
Aqoxy2G04090 Aquilegia oxysepala HOM05D005795 ORTHO05D007200 3.0e-81 306.2 325 58.8
TPR.G18871 Trifolium pratense HOM05D005795 ORTHO05D007200 4.0e-81 305.8 325 58.8
Phvul.005G152400 Phaseolus vulgaris HOM05D005795 ORTHO05D007200 7.5e-80 301.6 338 56.2
Eucgr.A00077 Eucalyptus grandis HOM05D005795 ORTHO05D007200 9.8e-80 301.2 322 61.5
Prupe.1G191500 Prunus persica HOM05D005795 ORTHO05D007200 1.3e-79 300.8 321 59.8
Potri.007G127500 Populus trichocarpa HOM05D005795 ORTHO05D007200 2.8e-79 299.7 325 58.2
MD04G1007300 Malus domestica HOM05D005795 ORTHO05D007200 3.7e-79 299.3 321 61.4
BcaC09g50250 Brassica carinata HOM05D005795 ORTHO05D007200 4.5e-77 292.4 282 67.4
CAN.G65.180 Capsicum annuum HOM05D005795 ORTHO05D007200 4.5e-77 292.4 283 62.9
Sp7g13790 Schrenkiella parvula HOM05D005795 ORTHO05D007200 3.3e-75 286.2 320 56.9
Nitab4.5_0003132g0100 Nicotiana tabacum HOM05D005795 ORTHO05D007200 7.2e-75 285.0 332 45.5
A01p22030 Brassica napus HOM05D005795 ORTHO05D007200 1.2e-74 284.3 319 61.1
BraA01t02109Z Brassica rapa HOM05D005795 ORTHO05D007200 1.2e-74 284.3 319 61.1
BcaNung00265 Brassica carinata HOM05D005795 ORTHO05D007200 2.3e-73 280.0 317 59.3
CDE08G0443 Ceratophyllum demersum HOM05D005795 ORTHO05D007200 2.0e-72 276.9 321 56.7
Pp3c9_24240 Physcomitrium patens HOM05D005795 ORTHO05D007200 2.1e-66 256.9 311 54.7
Hma1.2p1_0754F.1_g213060 Hydrangea macrophylla HOM05D005795 ORTHO05D007200 4.7e-66 255.8 165 67.3
Oeu035829.1 Olea europaea HOM05D005795 ORTHO05D007200 4.4e-64 249.2 191 60.7
SMO137G0277 Selaginella moellendorffii HOM05D005795 ORTHO05D007200 3.2e-62 243.0 322 50.6
Nitab4.5_0005570g0030 Nicotiana tabacum HOM05D005795 ORTHO05D007200 3.3e-59 233.0 167 61.1
Cc05_g03950 Coffea canephora HOM05D005795 ORTHO05D007200 1.6e-58 230.7 167 62.3
Mapoly0093s0047 Marchantia polymorpha HOM05D005795 ORTHO05D007200 6.2e-58 228.8 317 52.7
TAR633G0878 Trochodendron aralioides HOM05D005795 ORTHO05D007200 8.0e-58 228.4 167 61.7
BcaC06g33415 Brassica carinata HOM05D005795 ORTHO05D007200 6.4e-55 218.8 322 43.8
Psat1g007200 Pisum sativum HOM05D005795 ORTHO05D007200 1.7e-52 210.7 166 54.2
FAN12G2789 Fragaria x ananassa HOM05D005795 ORTHO05D007200 6.6e-52 208.8 163 55.2
SHI30236 Sapria himalayana HOM05D005795 ORTHO05D007200 8.6e-52 208.4 250 44.0
Eucgr.A00272 Eucalyptus grandis HOM05D005795 ORTHO05D007200 5.6e-51 205.7 170 57.1
FAN12G0695 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.6e-50 203.0 159 55.3
Eucgr.A00076 Eucalyptus grandis HOM05D005795 ORTHO05D007200 2.0e-48 197.2 165 56.4
Sc03g0006720 Simmondsia chinensis HOM05D005795 ORTHO05D007200 2.5e-43 180.3 167 51.5
BolC1t02678H Brassica oleracea HOM05D005795 ORTHO05D000108 5.4e-38 162.5 166 49.4
FAN17G0508 Fragaria x ananassa HOM05D005795 ORTHO05D007200 3.0e-36 156.8 186 44.6
AagrBONN_evm.TU.Sc2ySwM_228.2319 Anthoceros agrestis HOM05D005795 ORTHO05D007200 3.3e-35 153.3 219 57.1
BcaC06g32941 Brassica carinata HOM05D005795 ORTHO05D007200 3.6e-34 149.8 165 44.8
CBR_g21757 Chara braunii HOM05D005795 ORTHO05D007200 5.8e-32 142.5 347 35.4
MCO13G170 Micromonas commoda HOM05D005795 ORTHO05D007200 2.4e-30 137.1 253 33.2
Duzib151G0649 Durio zibethinus HOM05D005795 ORTHO05D007200 2.5e-27 127.1 104 62.5
AagrBONN_evm.TU.Sc2ySwM_117.2773 Anthoceros agrestis HOM05D005795 ORTHO05D007200 1.8e-25 120.9 167 37.1
Haze_01530 Corylus avellana HOM05D005795 ORTHO05D007200 2.4e-25 120.6 78 71.8
Eucgr.L02278 Eucalyptus grandis HOM05D005795 ORTHO05D007200 4.0e-25 119.8 103 56.3
Cre01.g016950 Chlamydomonas reinhardtii HOM05D005795 ORTHO05D007200 2.2e-23 114.0 253 49.4
TAR633G0840 Trochodendron aralioides HOM05D005795 ORTHO05D007200 2.2e-23 114.0 79 68.4
Cfa027123 Carpinus fangiana HOM05D004239 ORTHO05D005191 6.4e-23 112.5 354 30.5
SHI30240 Sapria himalayana HOM05D005795 ORTHO05D007200 2.4e-22 110.5 72 72.2
Cpa.g.sc41.23 Carica papaya HOM05D005795 ORTHO05D007200 1.8e-17 94.4 88 52.3
A05p02150 Brassica napus HOM05D005795 ORTHO05D007200 2.4e-17 94.0 62 67.7
Cpa.g.sc41.24 Carica papaya HOM05D005795 ORTHO05D007200 3.9e-12 76.6 122 38.5
PSO648G0124 Papaver somniferum HOM05D005795 ORTHO05D007200 9.6e-11 72.0 47 68.1
Gohir.A10G135766 Gossypium hirsutum HOM05D005795 ORTHO05D007200 1.3e-10 71.6 54 63.0
Rhsim12G0155600 Rhododendron simsii HOM05D005795 ORTHO05D007200 1.4e-06 58.2 37 75.7
PSO063G4587 Papaver somniferum HOM05D005795 ORTHO05D007200 4.2e-06 56.6 55 50.9


User provided reference genes

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