Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4287 Salvia bowleyana HOM05D002536 ORTHO05D008091 1.6e-172 609.4 315 100.0
MSTRG.23612 Avicennia marina HOM05D002536 ORTHO05D008091 7.7e-135 484.2 317 80.8
Migut.H00262 Erythranthe guttata HOM05D002536 ORTHO05D008091 1.2e-130 470.3 318 78.6
Oeu047422.1 Olea europaea HOM05D002536 ORTHO05D008091 1.0e-115 420.6 320 70.0
Cc07_g08230 Coffea canephora HOM05D002536 ORTHO05D008091 3.4e-114 415.6 324 70.4
Sopen02g035940 Solanum pennellii HOM05D002536 ORTHO05D008091 9.5e-109 397.5 274 74.5
Solyc02g091320.4 Solanum lycopersicum HOM05D002536 ORTHO05D008091 2.1e-108 396.4 274 74.1
TWI53G1346 Tripterygium wilfordii HOM05D002536 ORTHO05D008091 1.2e-106 390.6 310 67.7
Nitab4.5_0002456g0160 Nicotiana tabacum HOM05D002536 ORTHO05D008091 3.7e-105 385.6 274 72.6
Peaxi162Scf00803g00531 Petunia axillaris HOM05D002536 ORTHO05D008091 4.9e-105 385.2 273 72.5
PGSC0003DMG400030642 Solanum tuberosum HOM05D002536 ORTHO05D008091 8.3e-105 384.4 275 72.4
Nitab4.5_0002248g0020 Nicotiana tabacum HOM05D002536 ORTHO05D008091 1.4e-104 383.6 274 72.3
Actinidia15922 Actinidia chinensis HOM05D002536 ORTHO05D008091 3.2e-104 382.5 320 66.2
CAN.G625.80 Capsicum annuum HOM05D002536 ORTHO05D008091 3.2e-104 382.5 274 72.3
Atru.chr1.1780 Acer truncatum HOM05D002536 ORTHO05D008091 1.6e-103 380.2 315 66.0
Atru.chr1.1783 Acer truncatum HOM05D002536 ORTHO05D008091 1.6e-103 380.2 315 66.0
arahy.Tifrunner.gnm1.ann1.SZ684F Arachis hypogaea HOM05D002536 ORTHO05D008091 1.6e-103 380.2 315 64.1
Psat2g023480 Pisum sativum HOM05D002536 ORTHO05D008091 1.6e-103 380.2 312 65.4
Medtr5g087440 Medicago truncatula HOM05D002536 ORTHO05D008091 3.5e-103 379.0 321 65.1
TPR.G11790 Trifolium pratense HOM05D002536 ORTHO05D008091 5.9e-103 378.3 268 72.4
Medtr5g086010 Medicago truncatula HOM05D002536 ORTHO05D008091 3.0e-102 375.9 268 71.6
Rhsim10G0078900 Rhododendron simsii HOM05D002536 ORTHO05D008091 3.9e-102 375.6 271 72.0
LjContig00564g0008816 Lotus japonicus HOM05D002536 ORTHO05D008091 5.0e-102 375.2 268 72.8
Ca_06135_v3 Cicer arietinum L. HOM05D002536 ORTHO05D008091 6.6e-102 374.8 306 65.7
AUR62023248 Chenopodium quinoa HOM05D002536 ORTHO05D008091 1.1e-101 374.0 265 73.6
Eucgr.F02816 Eucalyptus grandis HOM05D002536 ORTHO05D008091 1.1e-101 374.0 270 71.1
Sabra04G0061700 Salix brachista HOM05D002536 ORTHO05D008091 1.5e-101 373.6 328 63.1
Cfa007856 Carpinus fangiana HOM05D002536 ORTHO05D008091 1.9e-101 373.2 321 64.5
EL10Ac2g04494 Beta vulgaris HOM05D002536 ORTHO05D008091 3.3e-101 372.5 273 71.1
HanXRQChr11g0325231 Helianthus annuus HOM05D002536 ORTHO05D008091 3.3e-101 372.5 314 63.4
Lalb_Chr03g0036071 Lupinus albus HOM05D002536 ORTHO05D008091 3.3e-101 372.5 268 72.0
Ah.10g037920 Amaranthus hybridus HOM05D002536 ORTHO05D008091 4.3e-101 372.1 265 72.8
arahy.Tifrunner.gnm1.ann1.NZLK2N Arachis hypogaea HOM05D002536 ORTHO05D008091 5.6e-101 371.7 264 70.8
Haze_14213 Corylus avellana HOM05D002536 ORTHO05D008091 7.3e-101 371.3 272 71.0
Potri.004G091600 Populus trichocarpa HOM05D002536 ORTHO05D008091 1.2e-100 370.5 328 63.4
DCAR_008922 Daucus carota HOM05D000103 ORTHO05D008091 1.6e-100 370.2 265 73.2
MELO3C020303.2 Cucumis melo HOM05D002536 ORTHO05D008091 8.0e-100 367.9 296 65.9
COL.COLO4_16592 Corchorus olitorius HOM05D002536 ORTHO05D008091 1.8e-99 366.7 326 62.9
Hund13690 Selenicereus undatus HOM05D002536 ORTHO05D008091 1.8e-99 366.7 267 72.3
Aqoxy3G00142 Aquilegia oxysepala HOM05D002536 ORTHO05D008091 2.3e-99 366.3 272 70.6
Sed0014940 Sechium edule HOM05D002536 ORTHO05D008091 4.0e-99 365.5 272 68.8
Prupe.3G152500 Prunus persica HOM05D002536 ORTHO05D008091 5.2e-99 365.2 321 64.2
TAR622G0880 Trochodendron aralioides HOM05D002536 ORTHO05D008091 8.9e-99 364.4 272 69.9
Aa31LG11G12180 Aethionema arabicum HOM05D002536 ORTHO05D008091 2.6e-98 362.8 270 69.6
Sc10g0000870 Simmondsia chinensis HOM05D002536 ORTHO05D008091 4.4e-98 362.1 324 63.9
CANSAT78G0797 Cannabis sativa HOM05D002536 ORTHO05D008091 9.8e-98 360.9 315 64.1
Ciclev10012168m.g Citrus clementina HOM05D002536 ORTHO05D008091 9.8e-98 360.9 329 62.0
CsaV3_3G017670 Cucumis sativus L. HOM05D002536 ORTHO05D008091 9.8e-98 360.9 291 65.6
Cpa.g.sc116.19 Carica papaya HOM05D002536 ORTHO05D008091 1.3e-97 360.5 320 63.4
Lj2P435T31 Lonicera japonica HOM05D002536 ORTHO05D008091 1.3e-97 360.5 262 72.5
CiPaw.04G045700 Carya illinoinensis HOM05D002536 ORTHO05D008091 2.2e-97 359.8 321 64.5
Lsat_1_v5_gn_4_154760 Lactuca sativa HOM05D002536 ORTHO05D008091 8.3e-97 357.8 323 62.2
ECA232G4028 Erigeron canadensis HOM05D002536 ORTHO05D008091 1.1e-96 357.5 323 62.2
PGR004G1229 Punica granatum HOM05D002536 ORTHO05D008091 2.4e-96 356.3 302 65.2
GSVIVG01030878001 Vitis vinifera HOM05D002536 ORTHO05D008091 2.4e-96 356.3 318 64.2
Phvul.004G133300 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 3.2e-96 355.9 314 63.7
QL05p059601 Quercus lobata HOM05D002536 ORTHO05D008091 5.4e-96 355.1 315 63.2
MD09G1260700 Malus domestica HOM05D002536 ORTHO05D008091 1.2e-95 354.0 301 64.5
arahy.Tifrunner.gnm1.ann1.CBV847 Arachis hypogaea HOM05D002536 ORTHO05D008091 2.0e-95 353.2 300 62.0
FAN23G2237 Fragaria x ananassa HOM05D002536 ORTHO05D008091 2.0e-95 353.2 315 62.2
ClCG05G010840 Citrullus lanatus HOM05D002536 ORTHO05D008091 4.6e-95 352.1 273 67.0
QL05p059839 Quercus lobata HOM05D002536 ORTHO05D008091 6.0e-95 351.7 317 63.1
arahy.Tifrunner.gnm1.ann1.YLI9AK Arachis hypogaea HOM05D002536 ORTHO05D008091 7.8e-95 351.3 258 68.2
VMungo1309G0890 Vigna mungo HOM05D002536 ORTHO05D008091 1.0e-94 350.9 313 63.6
GSVIVG01030879001 Vitis vinifera HOM05D002536 ORTHO05D008091 1.0e-94 350.9 270 68.9
Gohir.A04G142800 Gossypium hirsutum HOM05D002536 ORTHO05D008091 1.7e-94 350.1 326 61.3
SGA_v2.0_scaffold6G03262 Striga asiatica HOM05D002536 ORTHO05D008091 3.0e-94 349.4 322 61.8
Sp6g26760 Schrenkiella parvula HOM05D002536 ORTHO05D008091 8.6e-94 347.8 286 64.7
QL05p058873 Quercus lobata HOM05D002536 ORTHO05D008091 1.1e-93 347.4 269 68.0
Gohir.D04G186100 Gossypium hirsutum HOM05D002536 ORTHO05D008091 1.9e-93 346.7 326 61.3
Phvul.008G162400 Phaseolus vulgaris HOM05D002536 ORTHO05D008091 2.5e-93 346.3 313 62.3
Gorai.012G182500 Gossypium raimondii HOM05D002536 ORTHO05D008091 5.6e-93 345.1 326 61.0
Dinv19004 Davidia involucrata HOM05D002536 ORTHO05D008091 7.3e-93 344.7 324 60.8
BolC2t06821H Brassica oleracea HOM05D002536 ORTHO05D008091 1.2e-92 344.0 267 66.3
Thhalv10014009m.g Eutrema salsugineum HOM05D002536 ORTHO05D008091 2.8e-92 342.8 270 66.7
MBI16_g05920_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D006290 2.8e-92 342.8 267 69.3
RcHm_v2.0_Chr3g0492091 Rosa chinensis HOM05D002536 ORTHO05D008091 3.6e-92 342.4 321 61.1
A02p04220 Brassica napus HOM05D002536 ORTHO05D008091 3.1e-91 339.3 270 65.9
BraA02t05385Z Brassica rapa HOM05D002536 ORTHO05D008091 3.1e-91 339.3 270 65.9
Hma1.2p1_0283F.1_g113560 Hydrangea macrophylla HOM05D002536 ORTHO05D008091 3.1e-91 339.3 325 61.2
Thecc.02G292900 Theobroma cacao HOM05D002536 ORTHO05D008091 5.2e-91 338.6 326 60.1
SGA_v2.0_scaffold6G03263 Striga asiatica HOM05D002536 ORTHO05D008091 4.4e-90 335.5 320 61.2
C02p09100 Brassica napus HOM05D002536 ORTHO05D008091 1.3e-89 334.0 274 64.6
Manes.01G115200 Manihot esculenta HOM05D002536 ORTHO05D008091 1.7e-89 333.6 234 74.4
FvH4_1g30050 Fragaria vesca HOM05D002536 ORTHO05D008091 2.9e-89 332.8 315 59.4
Nn3g18195 Nelumbo nucifera HOM05D002536 ORTHO05D008091 1.1e-88 330.9 321 59.8
Duzib248G1146 Durio zibethinus HOM05D002536 ORTHO05D008091 3.2e-88 329.3 326 59.2
CSS0023678 Camellia sinensis var. sinensis HOM05D002536 ORTHO05D006290 1.3e-86 323.9 267 65.9
CARHR195750 Cardamine hirsuta HOM05D002536 ORTHO05D008091 5.1e-86 322.0 282 61.3
FAN19G1396 Fragaria x ananassa HOM05D002536 ORTHO05D008091 6.6e-86 321.6 265 64.2
AL6G28530 Arabidopsis lyrata HOM05D002536 ORTHO05D008091 1.1e-85 320.9 318 56.9
FAN26G2179 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.3e-85 319.3 315 57.8
AT5G17460 Arabidopsis thaliana HOM05D002536 ORTHO05D008091 3.6e-84 315.8 234 69.2
Carub.0006s1568 Capsella rubella HOM05D002536 ORTHO05D008091 3.6e-84 315.8 300 60.0
PSO478G1642 Papaver somniferum HOM05D002536 ORTHO05D008091 1.8e-83 313.5 328 56.4
SGA_v2.0_scaffold6G03266 Striga asiatica HOM05D002536 ORTHO05D008091 4.0e-83 312.4 240 70.8
PSO782G0049 Papaver somniferum HOM05D002536 ORTHO05D008091 5.2e-83 312.0 330 56.4
QL05p059463 Quercus lobata HOM05D002536 ORTHO05D008091 8.9e-83 311.2 269 63.2
CDE07G0699 Ceratophyllum demersum HOM05D002536 ORTHO05D008091 2.9e-81 306.2 268 63.1
ATR0041G006 Amborella trichopoda HOM05D002536 ORTHO05D008091 2.7e-79 299.7 264 61.4
Os01g0125700 Oryza sativa ssp. japonica HOM05D002536 ORTHO05D008091 3.9e-78 295.8 260 61.5
AUR62023202 Chenopodium quinoa HOM05D002536 ORTHO05D008091 3.6e-76 289.3 210 70.5
BcaC03g13522 Brassica carinata HOM05D002536 ORTHO05D008091 4.0e-75 285.8 227 65.2
SGA_v2.0_scaffold6G03268 Striga asiatica HOM05D002536 ORTHO05D008091 4.0e-75 285.8 287 58.5
unitig_899.g15351 Utricularia gibba HOM05D002536 ORTHO05D008091 4.0e-75 285.8 208 69.2
SHI17045 Sapria himalayana HOM05D002536 ORTHO05D008091 5.2e-75 285.4 272 57.4
Glyma.14G164000 Glycine max HOM05D002536 ORTHO05D008091 2.1e-71 273.5 268 58.2
FAN28G0948 Fragaria x ananassa HOM05D002536 ORTHO05D008091 3.3e-69 266.2 252 57.5
Zm00001eb334950 Zea mays HOM05D002536 ORTHO05D008091 3.5e-63 246.1 170 71.2
MBI16_g46274_MAGBIO Magnolia biondii HOM05D002536 ORTHO05D008091 2.8e-60 236.5 172 69.8
MD09G1260800 Malus domestica HOM05D002536 ORTHO05D008091 3.1e-59 233.0 180 67.8
SEGI_34238 Sequoiadendron giganteum HOM05D002536 ORTHO05D008091 3.4e-50 203.0 279 44.1
Glyma.13G079200 Glycine max HOM05D002536 ORTHO05D008091 3.9e-46 189.5 222 50.9
BcaB08g36768 Brassica carinata HOM05D002536 ORTHO05D007973 8.5e-41 171.8 134 65.7
FAN28G0812 Fragaria x ananassa HOM05D002536 ORTHO05D008091 1.5e-34 151.0 264 39.8
MD09G1260900 Malus domestica HOM05D002536 ORTHO05D008091 1.3e-33 147.9 200 46.0
HPP92_000766 Vanilla planifolia HOM05D002536 ORTHO05D008091 1.9e-24 117.5 117 57.3
A10p21940 Brassica napus HOM05D002536 ORTHO05D008091 9.4e-24 115.2 81 69.1
BcaC04g18790 Brassica carinata HOM05D002536 ORTHO05D008091 2.9e-17 93.6 91 54.9
C09p59690 Brassica napus HOM05D002536 ORTHO05D008091 8.5e-17 92.0 91 56.0
BolC9t58807H Brassica oleracea HOM05D002536 ORTHO05D008091 2.5e-16 90.5 91 52.7
BraA10t44252Z Brassica rapa HOM05D002536 ORTHO05D008091 1.0e-06 58.5 66 48.5
SMO343G0062 Selaginella moellendorffii HOM05D067698 ORTHO05D050854 3.0e-06 57.0 101 34.7
A10p21930 Brassica napus HOM05D002536 ORTHO05D008091 4.0e-06 56.6 66 48.5


User provided reference genes

Program Settings