Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4181 Salvia bowleyana HOM05D003611 ORTHO05D004281 0.0e+00 1167.5 610 100.0
Migut.B01791 Erythranthe guttata HOM05D003611 ORTHO05D004281 2.4e-169 599.7 526 64.3
MSTRG.20858 Avicennia marina HOM05D003611 ORTHO05D004281 3.3e-166 589.3 526 63.1
SGA_v2.0_scaffold4G02289 Striga asiatica HOM05D003611 ORTHO05D004281 2.4e-153 546.6 535 60.7
MSTRG.4840 Avicennia marina HOM05D003611 ORTHO05D004281 6.9e-148 528.5 526 59.7
Dinv32512 Davidia involucrata HOM05D003611 ORTHO05D004281 7.2e-129 465.3 529 53.9
Oeu018963.2 Olea europaea HOM05D003611 ORTHO05D004281 1.1e-126 458.0 609 47.3
GSVIVG01026955001 Vitis vinifera HOM05D003611 ORTHO05D004281 2.0e-126 457.2 525 52.6
Dinv43856 Davidia involucrata HOM05D003611 ORTHO05D004281 6.9e-124 448.7 532 52.6
Haze_15553 Corylus avellana HOM05D003611 ORTHO05D004281 5.0e-122 442.6 551 48.1
Cc02_g38450 Coffea canephora HOM05D003611 ORTHO05D004281 2.5e-121 440.3 527 53.7
Cfa003881 Carpinus fangiana HOM05D003611 ORTHO05D004281 3.2e-121 439.9 527 49.1
Peaxi162Scf00020g01228 Petunia axillaris HOM05D003611 ORTHO05D004281 1.1e-118 431.4 526 50.6
CiPaw.01G065700 Carya illinoinensis HOM05D003611 ORTHO05D004281 3.3e-118 429.9 534 47.9
Prupe.2G176000 Prunus persica HOM05D003611 ORTHO05D004281 3.3e-118 429.9 541 50.5
Actinidia10062 Actinidia chinensis HOM05D003611 ORTHO05D004281 2.4e-116 423.7 529 47.6
QL04p055101 Quercus lobata HOM05D003611 ORTHO05D004281 7.0e-116 422.2 547 48.4
Nitab4.5_0010703g0040 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.2e-115 421.4 527 49.5
Potri.014G089200 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.5e-113 414.5 529 51.2
Ciclev10018621m.g Citrus clementina HOM05D003611 ORTHO05D004281 1.9e-113 414.1 545 49.0
Sopen01g038800 Solanum pennellii HOM05D003611 ORTHO05D004281 1.9e-113 414.1 525 48.8
Nitab4.5_0000915g0210 Nicotiana tabacum HOM05D003611 ORTHO05D004281 9.4e-113 411.8 525 48.8
CSS0038908 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 4.7e-112 409.5 529 48.8
Solyc01g095020.3 Solanum lycopersicum HOM05D003611 ORTHO05D004281 6.1e-112 409.1 525 48.8
Lj7A508G38 Lonicera japonica HOM05D003611 ORTHO05D004281 8.0e-112 408.7 533 49.9
Gohir.D11G096300 Gossypium hirsutum HOM05D003611 ORTHO05D004281 5.2e-111 406.0 540 48.5
Thecc.01G353800 Theobroma cacao HOM05D003611 ORTHO05D004281 6.7e-111 405.6 539 47.5
Gohir.D11G096500 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.5e-110 404.4 539 47.5
Gorai.007G102600 Gossypium raimondii HOM05D003611 ORTHO05D004281 2.0e-110 404.1 540 48.3
Gohir.A11G091700 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.3e-109 401.4 539 48.1
Potri.002G163000 Populus trichocarpa HOM05D003611 ORTHO05D004281 1.3e-109 401.4 542 50.4
Gorai.007G102800 Gossypium raimondii HOM05D003611 ORTHO05D004281 2.8e-109 400.2 539 47.1
FvH4_7g15120 Fragaria vesca HOM05D003611 ORTHO05D004281 4.8e-109 399.4 538 48.3
FAN03G1353 Fragaria x ananassa HOM05D003611 ORTHO05D004281 4.8e-109 399.4 536 48.3
MD07G1132600 Malus domestica HOM05D003611 ORTHO05D004281 6.3e-109 399.1 531 49.5
Actinidia20152 Actinidia chinensis HOM05D003611 ORTHO05D004281 1.1e-108 398.3 535 44.9
Gohir.A11G091600 Gossypium hirsutum HOM05D003611 ORTHO05D004281 1.1e-108 398.3 539 48.1
Sopen10g005780 Solanum pennellii HOM05D003611 ORTHO05D004281 1.1e-108 398.3 526 47.0
FAN10G4104 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.4e-108 397.1 536 48.5
RcHm_v2.0_Chr1g0357311 Rosa chinensis HOM05D003611 ORTHO05D004281 4.1e-108 396.4 537 48.6
Sabra14G0064800 Salix brachista HOM05D003611 ORTHO05D004281 4.1e-108 396.4 528 50.2
COL.COLO4_12765 Corchorus olitorius HOM05D003611 ORTHO05D004281 5.3e-108 396.0 531 49.0
FAN10G1370 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.6e-107 394.4 536 48.3
Sabra02G0147500 Salix brachista HOM05D003611 ORTHO05D004281 2.0e-107 394.0 529 50.9
FAN06G4234 Fragaria x ananassa HOM05D003611 ORTHO05D004281 2.6e-107 393.7 536 47.9
MD01G1069900 Malus domestica HOM05D003611 ORTHO05D004281 1.0e-106 391.7 527 49.7
FAN01G0094 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.3e-106 391.3 537 48.4
CiPaw.02G033900 Carya illinoinensis HOM05D003611 ORTHO05D004281 5.0e-106 389.4 525 45.3
PGR042G1491 Punica granatum HOM05D003611 ORTHO05D004281 5.0e-106 389.4 527 46.3
Solyc10g012030.4 Solanum lycopersicum HOM05D003611 ORTHO05D004281 8.5e-106 388.7 525 46.3
Manes.05G030300 Manihot esculenta HOM05D003611 ORTHO05D004281 3.2e-105 386.7 546 48.9
Glyma.18G237600 Glycine max HOM05D003611 ORTHO05D004281 9.4e-105 385.2 542 46.3
FAN06G0771 Fragaria x ananassa HOM05D003611 ORTHO05D004281 1.6e-104 384.4 538 47.6
Nn1g01656 Nelumbo nucifera HOM05D003611 ORTHO05D004281 8.0e-104 382.1 555 48.3
Glyma.09G255400 Glycine max HOM05D003611 ORTHO05D004281 1.4e-103 381.3 530 47.4
CSS0009973 Camellia sinensis var. sinensis HOM05D003611 ORTHO05D004281 6.8e-103 379.0 531 47.8
Atru.chr5.552 Acer truncatum HOM05D003611 ORTHO05D004281 8.8e-103 378.6 538 45.9
Rhsim07G0011300 Rhododendron simsii HOM05D003611 ORTHO05D004281 8.8e-103 378.6 566 43.6
Peaxi162Scf00585g00319 Petunia axillaris HOM05D003611 ORTHO05D004281 4.8e-101 372.9 525 48.0
Lsat_1_v5_gn_4_35681 Lactuca sativa HOM05D003611 ORTHO05D004281 8.3e-101 372.1 529 45.9
Duzib138G0252 Durio zibethinus HOM05D003611 ORTHO05D004281 5.4e-100 369.4 526 48.3
TAR375G0370 Trochodendron aralioides HOM05D003611 ORTHO05D004281 1.6e-99 367.9 478 47.5
Eucgr.E00101 Eucalyptus grandis HOM05D003611 ORTHO05D004281 2.7e-99 367.1 526 46.4
Cpa.g.sc184.26 Carica papaya HOM05D003611 ORTHO05D004281 4.5e-99 366.3 569 43.1
arahy.Tifrunner.gnm1.ann1.I9FVBP Arachis hypogaea HOM05D003611 ORTHO05D004281 5.9e-99 365.9 533 47.5
VMungo1383G2804 Vigna mungo HOM05D003611 ORTHO05D004281 1.0e-98 365.2 537 47.1
Medtr7g078820 Medicago truncatula HOM05D003611 ORTHO05D004281 2.2e-98 364.0 534 46.1
TWI14G0836 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 2.5e-97 360.5 526 47.0
Psat3g107120 Pisum sativum HOM05D003611 ORTHO05D004281 4.2e-97 359.8 527 47.8
Duzib133G0517 Durio zibethinus HOM05D003611 ORTHO05D004281 1.6e-96 357.8 535 44.7
CANSAT56G4470 Cannabis sativa HOM05D003611 ORTHO05D004281 3.6e-96 356.7 526 48.1
HanXRQChr17g0562341 Helianthus annuus HOM05D003611 ORTHO05D004281 8.0e-96 355.5 526 44.9
MELO3C006087.2 Cucumis melo HOM05D003611 ORTHO05D004281 2.3e-95 354.0 528 43.9
Ca_00818_v3 Cicer arietinum L. HOM05D003611 ORTHO05D004281 6.8e-95 352.4 529 48.0
ClCG05G001310 Citrullus lanatus HOM05D003611 ORTHO05D004281 1.5e-94 351.3 536 43.1
Hund16671 Selenicereus undatus HOM05D003611 ORTHO05D004281 1.5e-94 351.3 529 42.9
TPR.G22300 Trifolium pratense HOM05D003611 ORTHO05D004281 1.5e-94 351.3 534 47.6
Lalb_Chr04g0259241 Lupinus albus HOM05D003611 ORTHO05D004281 2.8e-93 347.1 533 47.1
Lalb_Chr17g0339111 Lupinus albus HOM05D003611 ORTHO05D004281 6.3e-93 345.9 526 45.8
CsaV3_3G008680 Cucumis sativus L. HOM05D003611 ORTHO05D004281 3.1e-92 343.6 529 42.9
Sc23g0002620 Simmondsia chinensis HOM05D003611 ORTHO05D004281 1.2e-91 341.7 531 42.2
ECA234G2210 Erigeron canadensis HOM05D003611 ORTHO05D004281 1.6e-91 341.3 526 44.7
Lalb_Chr10g0096711 Lupinus albus HOM05D003611 ORTHO05D004281 2.0e-91 340.9 531 45.2
Phvul.008G059100 Phaseolus vulgaris HOM05D003611 ORTHO05D004281 2.7e-91 340.5 525 45.1
Oeu015220.3 Olea europaea HOM05D003611 ORTHO05D004281 4.3e-89 333.2 398 52.5
EL10Ac1g00365 Beta vulgaris HOM05D003611 ORTHO05D004281 5.6e-89 332.8 532 43.4
Lj1g0014988 Lotus japonicus HOM05D003611 ORTHO05D004281 7.3e-89 332.4 527 46.3
Actinidia18539 Actinidia chinensis HOM05D003611 ORTHO05D004281 9.5e-89 332.0 534 45.3
MBI11_g13553_MAGBIO Magnolia biondii HOM05D003611 ORTHO05D004281 9.5e-89 332.0 552 40.4
vmacro13239 Vaccinium macrocarpon HOM05D003611 ORTHO05D004281 2.8e-88 330.5 621 38.3
THA.LOC104801395 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 6.1e-88 329.3 553 42.7
Hund27250 Selenicereus undatus HOM05D003611 ORTHO05D004281 1.8e-87 327.8 502 44.8
AL6G52100 Arabidopsis lyrata HOM05D003611 ORTHO05D004281 1.2e-86 325.1 534 41.4
Nitab4.5_0000690g0050 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.2e-86 325.1 471 46.3
Nitab4.5_0000200g0170 Nicotiana tabacum HOM05D003611 ORTHO05D004281 1.5e-86 324.7 497 44.7
Sed0010511 Sechium edule HOM05D003611 ORTHO05D004281 1.5e-86 324.7 542 42.4
Aqoxy7G00231 Aquilegia oxysepala HOM05D003611 ORTHO05D004281 2.0e-86 324.3 508 44.1
DCAR_006945 Daucus carota HOM05D003611 ORTHO05D004281 2.6e-86 323.9 526 42.4
Manes.01G253100 Manihot esculenta HOM05D003611 ORTHO05D004281 1.4e-84 318.2 475 47.4
Sed0009698 Sechium edule HOM05D003611 ORTHO05D004281 3.2e-84 317.0 538 40.7
arahy.Tifrunner.gnm1.ann1.9C73IW Arachis hypogaea HOM05D003611 ORTHO05D004281 7.0e-84 315.8 444 48.2
Carub.0006s3636 Capsella rubella HOM05D003611 ORTHO05D004281 3.5e-83 313.5 533 39.2
TWI59G0398 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.3e-82 311.6 498 45.0
AUR62004403 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.1e-81 308.5 530 41.3
THA.LOC104825859 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 1.9e-81 307.8 542 39.7
DCAR_008631 Daucus carota HOM05D003611 ORTHO05D004281 7.3e-81 305.8 457 45.1
PSO478G2290 Papaver somniferum HOM05D003611 ORTHO05D004281 7.3e-81 305.8 542 41.1
PSO782G0890 Papaver somniferum HOM05D003611 ORTHO05D004281 7.3e-81 305.8 538 41.4
CARHR249020 Cardamine hirsuta HOM05D003611 ORTHO05D004281 1.6e-80 304.7 529 41.6
AUR62022609 Chenopodium quinoa HOM05D003611 ORTHO05D004281 1.4e-79 301.6 530 40.8
AT4G01290 Arabidopsis thaliana HOM05D003611 ORTHO05D004281 9.8e-78 295.4 534 41.0
Thhalv10028394m.g Eutrema salsugineum HOM05D003611 ORTHO05D004281 1.9e-76 291.2 536 38.6
TWI23G0144 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 3.2e-76 290.4 501 42.9
THA.LOC104817035 Tarenaya hassleriana HOM05D003611 ORTHO05D004281 2.0e-75 287.7 544 38.4
Aa31LG5G730 Aethionema arabicum HOM05D003611 ORTHO05D004281 1.0e-74 285.4 553 37.6
Sp6g00840 Schrenkiella parvula HOM05D003611 ORTHO05D004281 2.3e-74 284.3 524 38.5
Lalb_Chr17g0339131 Lupinus albus HOM05D003611 ORTHO05D004281 1.5e-73 281.6 526 40.1
BcaC01g06854 Brassica carinata HOM05D003611 ORTHO05D004281 4.3e-73 280.0 546 39.7
BolC3t16170H Brassica oleracea HOM05D003611 ORTHO05D004281 2.8e-72 277.3 546 39.4
C03p38980 Brassica napus HOM05D003611 ORTHO05D004281 2.6e-70 270.8 546 39.2
A03p31960 Brassica napus HOM05D003611 ORTHO05D004281 1.3e-69 268.5 544 40.4
BraA03t12368Z Brassica rapa HOM05D003611 ORTHO05D004281 2.9e-69 267.3 544 40.3
HPP92_002731 Vanilla planifolia HOM05D003611 ORTHO05D004281 2.9e-69 267.3 532 39.5
A09p00050 Brassica napus HOM05D003611 ORTHO05D004281 1.1e-68 265.4 550 37.1
Ah.05g180220 Amaranthus hybridus HOM05D003611 ORTHO05D004281 1.4e-68 265.0 520 38.7
BcaB01g02151 Brassica carinata HOM05D003611 ORTHO05D004281 4.1e-68 263.5 534 38.2
Aa31LG5G740 Aethionema arabicum HOM05D003611 ORTHO05D007544 4.6e-67 260.0 378 44.4
CDE09G0589 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 3.9e-66 256.9 543 37.2
BcaB05g23959 Brassica carinata HOM05D003611 ORTHO05D004281 8.6e-66 255.8 531 38.0
BraA09t35736Z Brassica rapa HOM05D003611 ORTHO05D004281 3.3e-65 253.8 551 38.5
BcaB01g02283 Brassica carinata HOM05D003611 ORTHO05D004281 8.9e-63 245.7 540 38.7
CDE11G0274 Ceratophyllum demersum HOM05D003611 ORTHO05D004281 2.0e-62 244.6 548 35.8
BcaC04g24140 Brassica carinata HOM05D003611 ORTHO05D004281 7.6e-62 242.7 540 38.3
C09p00670 Brassica napus HOM05D003611 ORTHO05D004281 7.6e-62 242.7 540 38.3
BolC9t53001H Brassica oleracea HOM05D003611 ORTHO05D004281 7.6e-62 242.7 540 38.3
Sc01g0003270 Simmondsia chinensis HOM05D003611 ORTHO05D004281 6.4e-61 239.6 433 41.3
unitig_8.g3336 Utricularia gibba HOM05D003611 ORTHO05D004281 3.5e-59 233.8 539 37.8
Lalb_Chr04g0259211 Lupinus albus HOM05D003611 ORTHO05D004281 1.2e-56 225.3 234 55.1
Os06g0105900 Oryza sativa ssp. japonica HOM05D003611 ORTHO05D004281 1.6e-56 224.9 513 38.8
Zm00001eb374330 Zea mays HOM05D003611 ORTHO05D004281 1.8e-55 221.5 505 36.8
ATR0661G469 Amborella trichopoda HOM05D003611 ORTHO05D004281 1.7e-50 204.9 492 35.6
Hma1.2p1_0623F.1_g191000 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 1.1e-47 195.7 190 59.5
Cfa016292 Carpinus fangiana HOM05D003611 ORTHO05D004281 3.8e-37 160.6 434 34.3
GSVIVG01028853001 Vitis vinifera HOM05D003611 ORTHO05D004281 8.4e-37 159.5 337 36.2
QL09p012690 Quercus lobata HOM05D003611 ORTHO05D004281 1.2e-35 155.6 514 29.6
Hma1.2p1_0627F.1_g191700 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 3.5e-35 154.1 295 38.3
Dinv35257 Davidia involucrata HOM05D003611 ORTHO05D004281 4.3e-33 147.1 336 35.1
unitig_22.g6726 Utricularia gibba HOM05D003611 ORTHO05D004281 5.3e-31 140.2 193 48.2
Haze_00050 Corylus avellana HOM05D003611 ORTHO05D004281 2.6e-30 137.9 356 34.0
TAR374G1053 Trochodendron aralioides HOM05D003611 ORTHO05D004281 2.5e-28 131.3 299 36.8
Hma1.2p1_2961F.1_g330880 Hydrangea macrophylla HOM05D003611 ORTHO05D004281 2.8e-24 117.9 267 37.1
Pp3c19_15630 Physcomitrium patens HOM05D025697 ORTHO05D004281 5.3e-23 113.6 574 24.2
Pp3c18_8750 Physcomitrium patens HOM05D025697 ORTHO05D004281 1.9e-20 105.1 454 28.6
Atru.chr1.351 Acer truncatum HOM05D003611 ORTHO05D004281 1.6e-19 102.1 338 33.7
Duzib205G1157 Durio zibethinus HOM05D003611 ORTHO05D011897 7.9e-19 99.8 304 31.6
Oeu054339.1 Olea europaea HOM05D003611 ORTHO05D004281 3.0e-18 97.8 131 45.0
SEGI_14695 Sequoiadendron giganteum HOM05D003611 ORTHO05D004281 3.0e-18 97.8 357 32.8
Thecc.03G184800 Theobroma cacao HOM05D003611 ORTHO05D011897 1.3e-16 92.4 533 26.1
Gohir.A11G012500 Gossypium hirsutum HOM05D003611 ORTHO05D011897 1.1e-15 89.4 329 30.7
TWI23G0357 Tripterygium wilfordii HOM05D003611 ORTHO05D004281 1.1e-15 89.4 351 31.9
Actinidia02823 Actinidia chinensis HOM05D003611 ORTHO05D004281 3.1e-15 87.8 120 44.2
Mapoly0012s0024 Marchantia polymorpha HOM05D003611 ORTHO05D021332 3.4e-14 84.3 448 27.7
Gohir.D11G011700 Gossypium hirsutum HOM05D003611 ORTHO05D011897 2.2e-13 81.6 366 27.6
Gorai.007G013100 Gossypium raimondii HOM05D003611 ORTHO05D011897 5.0e-13 80.5 329 28.9
Rhsim03G0191400 Rhododendron simsii HOM05D003611 ORTHO05D038142 1.2e-11 75.9 239 31.8
Hund11716 Selenicereus undatus HOM05D003611 ORTHO05D026482 1.8e-10 72.0 299 28.4
unitig_22.g6727 Utricularia gibba HOM05D003611 ORTHO05D004281 3.9e-10 70.9 303 28.1
AUR62021117 Chenopodium quinoa HOM05D034504 ORTHO05D026482 9.7e-09 66.2 258 29.8
Sabra04G0048100 Salix brachista HOM05D003611 ORTHO05D011897 1.7e-08 65.5 306 29.7
Ciclev10006595m.g Citrus clementina HOM05D003611 ORTHO05D004281 2.8e-08 64.7 209 33.0
BcaC03g16054 Brassica carinata HOM05D003611 ORTHO05D004281 8.2e-08 63.2 71 49.3
Lalb_Chr04g0259231 Lupinus albus HOM05D003611 ORTHO05D004281 8.2e-08 63.2 114 38.6
Potri.004G073400 Populus trichocarpa HOM05D003611 ORTHO05D004281 4.1e-07 60.8 298 31.9
Prupe.2G301400 Prunus persica HOM05D010729 ORTHO05D011897 4.1e-07 60.8 252 28.2
AUR62031425 Chenopodium quinoa HOM05D034504 ORTHO05D026482 5.3e-07 60.5 258 29.1
MD01G1208800 Malus domestica HOM05D010729 ORTHO05D011897 5.3e-07 60.5 345 26.4


User provided reference genes

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