Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G4178 Salvia bowleyana HOM05D006889 ORTHO05D008614 3.8e-189 664.8 379 100.0
Migut.F00816 Erythranthe guttata HOM05D006889 ORTHO05D008614 1.3e-131 473.8 381 70.9
Oeu033252.2 Olea europaea HOM05D006889 ORTHO05D008614 4.6e-118 428.7 418 60.8
SGA_v2.0_scaffold62G21307 Striga asiatica HOM05D006889 ORTHO05D008614 5.5e-111 405.2 408 60.5
Atru.chr12.2063 Acer truncatum HOM05D006889 ORTHO05D008614 2.3e-109 399.8 379 66.5
Cc02_g09110 Coffea canephora HOM05D006889 ORTHO05D008614 3.0e-109 399.4 381 63.3
Thecc.06G017600 Theobroma cacao HOM05D006889 ORTHO05D008614 3.3e-108 396.0 379 65.2
GSVIVG01024467001 Vitis vinifera HOM05D006889 ORTHO05D008614 4.3e-108 395.6 373 66.0
QL09p026702 Quercus lobata HOM05D006889 ORTHO05D008614 2.2e-107 393.3 377 65.5
Dinv25463 Davidia involucrata HOM05D006889 ORTHO05D008614 1.8e-106 390.2 377 61.8
Sopen04g004970 Solanum pennellii HOM05D006889 ORTHO05D008614 9.0e-106 387.9 371 66.6
Solyc04g009830.3 Solanum lycopersicum HOM05D006889 ORTHO05D008614 2.0e-105 386.7 371 65.5
PGSC0003DMG400025437 Solanum tuberosum HOM05D006889 ORTHO05D008614 2.0e-105 386.7 371 66.6
unitig_747.g21800 Utricularia gibba HOM05D006889 ORTHO05D008614 7.6e-105 384.8 379 67.5
Ciclev10012044m.g Citrus clementina HOM05D006889 ORTHO05D008614 8.5e-104 381.3 377 63.7
CSS0010313 Camellia sinensis var. sinensis HOM05D006889 ORTHO05D008614 1.4e-103 380.6 355 62.5
ECA238G0057 Erigeron canadensis HOM05D006889 ORTHO05D008614 2.5e-103 379.8 392 62.2
Gohir.A06G144633 Gossypium hirsutum HOM05D006889 ORTHO05D008614 5.5e-103 378.6 379 62.3
Gorai.010G175600 Gossypium raimondii HOM05D006889 ORTHO05D008614 7.2e-103 378.3 379 62.8
RcHm_v2.0_Chr1g0383401 Rosa chinensis HOM05D006889 ORTHO05D008614 1.6e-102 377.1 368 62.2
Haze_22241 Corylus avellana HOM05D006889 ORTHO05D008614 2.7e-102 376.3 377 66.8
Manes.09G119000 Manihot esculenta HOM05D006889 ORTHO05D008614 6.1e-102 375.2 381 63.8
Nn6g34807 Nelumbo nucifera HOM05D006889 ORTHO05D008614 2.3e-101 373.2 375 65.1
FAN03G0535 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.1e-101 372.1 368 60.1
TAR369G0178 Trochodendron aralioides HOM05D006889 ORTHO05D008614 1.1e-100 370.9 373 61.7
Prupe.2G323000 Prunus persica HOM05D006889 ORTHO05D008614 1.9e-100 370.2 369 61.5
THA.LOC104805469 Tarenaya hassleriana HOM05D006889 ORTHO05D008614 1.9e-100 370.2 381 63.3
Sabra16G0274900 Salix brachista HOM05D006889 ORTHO05D008614 1.3e-99 367.5 379 61.7
FAN10G1689 Fragaria x ananassa HOM05D006889 ORTHO05D008614 2.2e-99 366.7 368 59.8
Lalb_Chr13g0293181 Lupinus albus HOM05D006889 ORTHO05D008614 2.2e-99 366.7 368 61.7
FAN10G2743 Fragaria x ananassa HOM05D006889 ORTHO05D008614 8.2e-99 364.8 368 59.5
Aqoxy4G02722 Aquilegia oxysepala HOM05D006889 ORTHO05D008614 5.3e-98 362.1 377 60.5
MSTRG.4328 Avicennia marina HOM05D006889 ORTHO05D008614 5.3e-98 362.1 380 62.6
vmacro10779 Vaccinium macrocarpon HOM05D006889 ORTHO05D008614 1.2e-97 360.9 359 67.7
FvH4_7g33430 Fragaria vesca HOM05D006889 ORTHO05D008614 1.5e-97 360.5 368 60.1
Carub.0004s1859 Capsella rubella HOM05D006889 ORTHO05D008614 3.4e-97 359.4 385 57.1
Eucgr.K00107 Eucalyptus grandis HOM05D006889 ORTHO05D008614 3.4e-97 359.4 379 57.5
CiPaw.07G182100 Carya illinoinensis HOM05D006889 ORTHO05D008614 1.3e-96 357.5 348 68.4
Actinidia31405 Actinidia chinensis HOM05D006889 ORTHO05D008614 1.1e-95 354.4 316 69.6
Potri.001G412800 Populus trichocarpa HOM05D006889 ORTHO05D008614 1.1e-95 354.4 379 61.7
AT2G36740 Arabidopsis thaliana HOM05D006889 ORTHO05D008614 9.4e-95 351.3 381 56.2
HanXRQChr07g0200571 Helianthus annuus HOM05D006889 ORTHO05D008614 3.6e-94 349.4 404 58.4
AL4G32960 Arabidopsis lyrata HOM05D006889 ORTHO05D008614 4.7e-94 349.0 385 55.6
PSO384G0326 Papaver somniferum HOM05D006889 ORTHO05D008614 7.9e-94 348.2 391 56.3
Cpa.g.sc140.53 Carica papaya HOM05D006889 ORTHO05D008614 2.3e-93 346.7 381 61.2
Aa31LG5G21960 Aethionema arabicum HOM05D006889 ORTHO05D008614 3.0e-93 346.3 385 56.1
A05p09120 Brassica napus HOM05D006889 ORTHO05D008614 2.6e-92 343.2 383 58.0
CsaV3_5G005080 Cucumis sativus L. HOM05D006889 ORTHO05D008614 2.6e-92 343.2 379 59.9
BraA05t19868Z Brassica rapa HOM05D006889 ORTHO05D008614 3.3e-92 342.8 383 58.0
FAN01G0055 Fragaria x ananassa HOM05D006889 ORTHO05D008614 3.3e-92 342.8 346 58.4
Lj4g0013326 Lotus japonicus HOM05D006889 ORTHO05D008614 3.3e-92 342.8 383 57.4
CDE08G0956 Ceratophyllum demersum HOM05D006889 ORTHO05D008614 4.4e-92 342.4 367 58.6
Nitab4.5_0002651g0040 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.7e-91 340.5 370 61.1
TWI60G1635 Tripterygium wilfordii HOM05D006889 ORTHO05D008614 1.7e-91 340.5 380 56.3
BolC4t22783H Brassica oleracea HOM05D006889 ORTHO05D008614 3.7e-91 339.3 381 57.2
BcaC02g11793 Brassica carinata HOM05D006889 ORTHO05D008614 4.8e-91 339.0 381 57.2
BolC4t22767H Brassica oleracea HOM05D006889 ORTHO05D008614 4.8e-91 339.0 381 57.2
Hma1.2p1_0164F.1_g073300 Hydrangea macrophylla HOM05D006889 ORTHO05D008614 1.4e-90 337.4 310 65.5
C04p11290 Brassica napus HOM05D006889 ORTHO05D008614 4.1e-90 335.9 381 57.0
PSO339G0304 Papaver somniferum HOM05D006889 ORTHO05D008614 4.5e-89 332.4 391 55.8
Ca_18207_v3 Cicer arietinum L. HOM05D006889 ORTHO05D008614 2.9e-88 329.7 368 56.5
Glyma.05G136000 Glycine max HOM05D006889 ORTHO05D008614 1.1e-87 327.8 368 59.0
MBI14_g11688_MAGBIO Magnolia biondii HOM05D006889 ORTHO05D008614 1.2e-86 324.3 380 61.3
Phvul.002G186100 Phaseolus vulgaris HOM05D006889 ORTHO05D008614 1.2e-86 324.3 377 55.7
Sabra16G0274600 Salix brachista HOM05D006889 ORTHO05D008614 1.0e-85 321.2 414 54.3
BcaB02g09334 Brassica carinata HOM05D006889 ORTHO05D008614 1.4e-85 320.9 385 53.5
Sed0014561 Sechium edule HOM05D006889 ORTHO05D008614 2.3e-85 320.1 379 56.7
CAN.G186.71 Capsicum annuum HOM05D006889 ORTHO05D008614 3.3e-84 316.2 371 54.4
Psat7g087400 Pisum sativum HOM05D006889 ORTHO05D008614 6.3e-83 312.0 385 54.5
arahy.Tifrunner.gnm1.ann1.T52I9D Arachis hypogaea HOM05D006889 ORTHO05D008614 3.1e-82 309.7 393 55.5
Os08g0192400 Oryza sativa ssp. japonica HOM05D006889 ORTHO05D008614 3.5e-81 306.2 372 54.6
Nitab4.5_0000930g0060 Nicotiana tabacum HOM05D006889 ORTHO05D008614 1.0e-80 304.7 372 58.1
MD07G1304400 Malus domestica HOM05D006889 ORTHO05D008614 1.7e-80 303.9 369 54.5
Gohir.D06G150400 Gossypium hirsutum HOM05D006889 ORTHO05D008614 8.5e-80 301.6 289 60.2
arahy.Tifrunner.gnm1.ann1.I4BD9U Arachis hypogaea HOM05D006889 ORTHO05D008614 1.1e-79 301.2 422 52.1
ATR0081G022 Amborella trichopoda HOM05D006889 ORTHO05D008614 1.9e-79 300.4 320 63.1
Hund18033 Selenicereus undatus HOM05D006889 ORTHO05D008614 3.2e-79 299.7 395 52.9
HPP92_000052 Vanilla planifolia HOM05D006889 ORTHO05D008614 2.2e-75 287.0 359 54.6
EL10Ac8g18884 Beta vulgaris HOM05D006889 ORTHO05D008614 1.1e-74 284.6 401 52.6
MD07G1075300 Malus domestica HOM05D006889 ORTHO05D008614 5.3e-74 282.3 380 51.8
Sp4g19020 Schrenkiella parvula HOM05D006889 ORTHO05D008614 5.3e-74 282.3 382 48.4
Sc08g0005450 Simmondsia chinensis HOM05D006889 ORTHO05D008614 5.9e-73 278.9 317 58.4
Peaxi162Scf00135g00913 Petunia axillaris HOM05D006889 ORTHO05D008614 1.1e-71 274.6 324 59.0
Thhalv10016833m.g Eutrema salsugineum HOM05D006889 ORTHO05D008614 1.9e-71 273.9 384 47.9
Lsat_1_v5_gn_2_107601 Lactuca sativa HOM05D006889 ORTHO05D008614 1.0e-69 268.1 381 50.7
Ah.14g084260 Amaranthus hybridus HOM05D006889 ORTHO05D008614 4.0e-69 266.2 389 47.6
MELO3C005447.2 Cucumis melo HOM05D006889 ORTHO05D008614 2.0e-68 263.8 286 64.0
Zm00001eb260210 Zea mays HOM05D006889 ORTHO05D008614 7.5e-68 261.9 380 45.5
CARHR131100 Cardamine hirsuta HOM05D006889 ORTHO05D008614 2.8e-67 260.0 386 47.4
PGR142G0052 Punica granatum HOM05D006889 ORTHO05D008614 6.3e-67 258.8 385 48.1
Rhsim09G0213900 Rhododendron simsii HOM05D006889 ORTHO05D008614 7.7e-65 251.9 392 48.0
Rhsim01G0067600 Rhododendron simsii HOM05D006889 ORTHO05D008614 6.5e-64 248.8 390 47.7
DCAR_030975 Daucus carota HOM05D006889 ORTHO05D008614 4.7e-54 216.1 363 42.1
AUR62039766 Chenopodium quinoa HOM05D006889 ORTHO05D008614 8.0e-54 215.3 255 63.5
Pp3c14_17650 Physcomitrium patens HOM05D006889 ORTHO05D008614 4.0e-53 213.0 329 50.5
TPR.G11931 Trifolium pratense HOM05D006889 ORTHO05D008614 7.5e-52 208.8 382 44.8
AUR62028393 Chenopodium quinoa HOM05D006889 ORTHO05D008614 7.0e-50 202.2 430 42.8
SMO165G0047 Selaginella moellendorffii HOM05D006889 ORTHO05D008614 2.1e-46 190.7 305 43.9
SEGI_10499 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 8.9e-45 185.3 295 50.2
COL.COLO4_31129 Corchorus olitorius HOM05D000112 ORTHO05D000564 1.7e-43 181.0 369 42.5
Mapoly0001s0482 Marchantia polymorpha HOM05D006889 ORTHO05D008614 1.7e-43 181.0 200 51.5
CBR_g38961 Chara braunii HOM05D006889 ORTHO05D008614 1.7e-40 171.0 359 42.3
DCAR_030020 Daucus carota HOM05D006889 ORTHO05D008614 1.7e-40 171.0 291 40.9
Gohir.D08G083500 Gossypium hirsutum HOM05D006889 ORTHO05D008614 2.8e-38 163.7 173 58.4
SEGI_12666 Sequoiadendron giganteum HOM05D006889 ORTHO05D008614 4.9e-35 152.9 169 55.0
TPR.G8913 Trifolium pratense HOM05D006889 ORTHO05D008614 1.9e-34 151.0 133 66.9
Gorai.004G087700 Gossypium raimondii HOM05D006889 ORTHO05D008614 7.1e-34 149.1 196 51.5
ClCG01G004860 Citrullus lanatus HOM05D006889 ORTHO05D008614 4.4e-28 129.8 198 55.1
SHI02511 Sapria himalayana HOM05D006889 ORTHO05D008614 5.3e-21 106.3 70 82.9
TPR.G34755 Trifolium pratense HOM05D006889 ORTHO05D008614 4.9e-19 99.8 62 83.9
Gohir.D02G011800 Gossypium hirsutum HOM05D004753 ORTHO05D005920 3.3e-15 87.0 177 41.2
Gorai.005G015000 Gossypium raimondii HOM05D004753 ORTHO05D005920 7.3e-15 85.9 177 40.7
Cre17.g728200 Chlamydomonas reinhardtii HOM05D006889 ORTHO05D008614 3.6e-14 83.6 306 31.4
MCO15G439 Micromonas commoda HOM05D006889 ORTHO05D008614 2.4e-13 80.9 306 34.6
PRCOL_00000609 Prasinoderma coloniale HOM05D006889 ORTHO05D008614 6.9e-13 79.3 138 37.7
Gohir.D04G081932 Gossypium hirsutum HOM05D004753 ORTHO05D005920 1.9e-10 71.2 67 61.2
SHI02510 Sapria himalayana HOM05D006889 ORTHO05D008614 1.8e-08 64.7 47 66.0
SHI02512 Sapria himalayana HOM05D006889 ORTHO05D008614 2.5e-07 60.8 86 52.3
FAN28G2910 Fragaria x ananassa HOM05D006889 ORTHO05D008614 5.6e-07 59.7 141 41.8


User provided reference genes

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