Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3897 Salvia bowleyana HOM05D007392 ORTHO05D009181 7.0e-69 263.8 134 100.0
SGA_v2.0_scaffold6G03356 Striga asiatica HOM05D007392 ORTHO05D009181 1.9e-29 132.9 144 53.5
Cc01_g00150 Coffea canephora HOM05D007392 ORTHO05D009181 3.2e-29 132.1 147 51.7
CAN.G1834.12 Capsicum annuum HOM05D007392 ORTHO05D009181 1.6e-28 129.8 134 53.0
Dinv13477 Davidia involucrata HOM05D007392 ORTHO05D009181 1.6e-28 129.8 146 54.1
PGSC0003DMG402032165 Solanum tuberosum HOM05D007392 ORTHO05D009181 2.7e-28 129.0 138 55.1
Solyc01g005530.3 Solanum lycopersicum HOM05D007392 ORTHO05D009181 3.0e-27 125.6 138 53.6
Sopen01g001550 Solanum pennellii HOM05D007392 ORTHO05D009181 3.9e-27 125.2 138 53.6
Nitab4.5_0000551g0100 Nicotiana tabacum HOM05D007392 ORTHO05D009181 8.9e-24 114.0 116 55.2
Actinidia16241 Actinidia chinensis HOM05D007392 ORTHO05D009181 1.2e-23 113.6 140 50.0
Nitab4.5_0006195g0060 Nicotiana tabacum HOM05D007392 ORTHO05D009181 3.4e-23 112.1 118 55.9
Actinidia00905 Actinidia chinensis HOM05D007392 ORTHO05D009181 4.4e-23 111.7 146 46.6
Lsat_1_v5_gn_6_55560 Lactuca sativa HOM05D007392 ORTHO05D009181 1.7e-22 109.8 146 47.3
SGA_v2.0_scaffold6G03313 Striga asiatica HOM05D007392 ORTHO05D009181 2.2e-22 109.4 139 53.2
Ciclev10017000m.g Citrus clementina HOM05D007392 ORTHO05D009181 4.9e-22 108.2 156 44.2
Migut.D02571 Erythranthe guttata HOM05D007392 ORTHO05D009181 4.9e-22 108.2 137 52.6
GSVIVG01025476001 Vitis vinifera HOM05D007392 ORTHO05D009181 1.4e-21 106.7 138 47.1
Peaxi162Scf00705g00062 Petunia axillaris HOM05D007392 ORTHO05D009181 4.1e-21 105.1 135 48.1
ECA233G2404 Erigeron canadensis HOM05D007392 ORTHO05D009181 3.5e-20 102.1 145 45.5
Migut.D02593 Erythranthe guttata HOM05D007392 ORTHO05D009181 3.5e-20 102.1 136 49.3
Manes.15G109800 Manihot esculenta HOM05D007392 ORTHO05D009181 3.5e-20 102.1 153 43.8
Rhsim13G0233100 Rhododendron simsii HOM05D007392 ORTHO05D009181 6.0e-20 101.3 123 50.4
MSTRG.20935 Avicennia marina HOM05D000287 ORTHO05D000319 1.0e-19 100.5 121 53.7
Oeu004754.1 Olea europaea HOM05D007392 ORTHO05D009181 3.9e-19 98.6 117 52.1
Migut.N00543 Erythranthe guttata HOM05D007392 ORTHO05D009181 3.3e-18 95.5 126 50.8
Potri.001G003300 Populus trichocarpa HOM05D007392 ORTHO05D009181 3.3e-18 95.5 146 43.8
CANSAT11G0973 Cannabis sativa HOM05D007392 ORTHO05D009181 7.3e-18 94.4 142 45.8
PSO339G3225 Papaver somniferum HOM05D007392 ORTHO05D009181 7.3e-18 94.4 143 41.3
Cfa009557 Carpinus fangiana HOM05D007392 ORTHO05D009181 9.5e-18 94.0 140 47.1
TWI34G1824 Tripterygium wilfordii HOM05D007392 ORTHO05D009181 9.5e-18 94.0 145 43.4
MD03G1003200 Malus domestica HOM05D007392 ORTHO05D009181 1.2e-17 93.6 152 40.1
Oeu059652.1 Olea europaea HOM05D007392 ORTHO05D009181 1.2e-17 93.6 123 47.2
FAN16G0802 Fragaria x ananassa HOM05D007392 ORTHO05D009181 1.6e-17 93.2 147 43.5
PSO384G3152 Papaver somniferum HOM05D007392 ORTHO05D009181 4.7e-17 91.7 142 42.3
RcHm_v2.0_Chr5g0083851 Rosa chinensis HOM05D007392 ORTHO05D009181 4.7e-17 91.7 148 44.6
CiPaw.13G177600 Carya illinoinensis HOM05D007392 ORTHO05D009181 6.2e-17 91.3 142 45.1
Nn2g15869 Nelumbo nucifera HOM05D007392 ORTHO05D009181 1.1e-16 90.5 141 42.6
Potri.003G221800 Populus trichocarpa HOM05D007392 ORTHO05D009181 1.1e-16 90.5 145 43.4
TAR623G1707 Trochodendron aralioides HOM05D007392 ORTHO05D009181 1.4e-16 90.1 138 44.2
FvH4_3g45780 Fragaria vesca HOM05D007392 ORTHO05D009181 1.8e-16 89.7 148 43.9
FAN11G3804 Fragaria x ananassa HOM05D007392 ORTHO05D009181 8.9e-16 87.4 147 44.9
Sc09g0000040 Simmondsia chinensis HOM05D007392 ORTHO05D009181 4.4e-15 85.1 162 40.1
Aqoxy2G00525 Aquilegia oxysepala HOM05D007392 ORTHO05D009181 5.8e-15 84.7 138 43.5
C01p51590 Brassica napus HOM05D007392 ORTHO05D009181 2.2e-14 82.8 157 43.3
QL01p003594 Quercus lobata HOM05D007392 ORTHO05D009181 2.9e-14 82.4 163 36.8
A05p36050 Brassica napus HOM05D007392 ORTHO05D009181 6.4e-14 81.3 166 39.2
BolC1t05102H Brassica oleracea HOM05D007392 ORTHO05D009181 6.4e-14 81.3 157 43.3
BcaC05g29176 Brassica carinata HOM05D007392 ORTHO05D009181 1.1e-13 80.5 171 38.0
THA.LOC104810320 Tarenaya hassleriana HOM05D007392 ORTHO05D009181 1.1e-13 80.5 153 41.8
EL10Ac4g10390 Beta vulgaris HOM05D007392 ORTHO05D009181 1.9e-13 79.7 132 38.6
Carub.0003s1294 Capsella rubella HOM05D007392 ORTHO05D009181 1.9e-13 79.7 164 38.4
AT3G13480 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 2.4e-13 79.3 167 40.7
vmacro04261 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 3.2e-13 79.0 107 48.6
A01p40100 Brassica napus HOM05D007392 ORTHO05D009181 5.4e-13 78.2 157 42.7
BraA01t04052Z Brassica rapa HOM05D007392 ORTHO05D009181 5.4e-13 78.2 157 42.7
CARHR088140 Cardamine hirsuta HOM05D007392 ORTHO05D009181 5.4e-13 78.2 163 38.0
Sp3g11690 Schrenkiella parvula HOM05D007392 ORTHO05D009181 9.2e-13 77.4 173 36.4
BraA03t12977Z Brassica rapa HOM05D007392 ORTHO05D009181 2.1e-12 76.3 167 37.7
DCAR_032194 Daucus carota HOM05D007392 ORTHO05D009181 2.1e-12 76.3 128 43.0
Thhalv10021633m.g Eutrema salsugineum HOM05D007392 ORTHO05D009181 2.1e-12 76.3 172 37.2
MD11G1003000 Malus domestica HOM05D007392 ORTHO05D009181 3.5e-12 75.5 149 36.9
Eucgr.J01763 Eucalyptus grandis HOM05D007392 ORTHO05D009181 7.8e-12 74.3 145 40.0
Sed0020032 Sechium edule HOM05D007392 ORTHO05D009181 7.8e-12 74.3 140 40.7
ClCG03G014560 Citrullus lanatus HOM05D007392 ORTHO05D009181 1.7e-11 73.2 138 42.8
MELO3C015574.2 Cucumis melo HOM05D007392 ORTHO05D009181 5.1e-11 71.6 143 41.3
BcaB04g18766 Brassica carinata HOM05D007392 ORTHO05D009181 6.6e-11 71.2 151 35.8
CsaV3_1G041630 Cucumis sativus L. HOM05D007392 ORTHO05D009181 6.6e-11 71.2 143 43.4
FAN25G2102 Fragaria x ananassa HOM05D007392 ORTHO05D009181 6.6e-11 71.2 125 40.8
AL3G25390 Arabidopsis lyrata HOM05D007392 ORTHO05D009181 8.6e-11 70.9 166 35.5
Prupe.6G002800 Prunus persica HOM05D007392 ORTHO05D009181 1.1e-10 70.5 123 44.7
vmacro23199 Vaccinium macrocarpon HOM05D007392 ORTHO05D009181 2.5e-10 69.3 98 45.9
Sabra03G0165000 Salix brachista HOM05D007392 ORTHO05D009181 9.6e-10 67.4 121 38.8
C05p54400 Brassica napus HOM05D007392 ORTHO05D009181 8.1e-09 64.3 149 36.2
PGR119G0135 Punica granatum HOM05D007392 ORTHO05D009181 4.0e-08 62.0 142 34.5
Sabra01G0002400 Salix brachista HOM05D007392 ORTHO05D009181 4.0e-08 62.0 130 37.7
Aa31LG8G680 Aethionema arabicum HOM05D007392 ORTHO05D009181 8.9e-08 60.8 133 37.6
HPP92_015638 Vanilla planifolia HOM05D007392 ORTHO05D009181 2.0e-07 59.7 136 36.8
Carub.0001s4396 Capsella rubella HOM05D007392 ORTHO05D009181 7.6e-07 57.8 63 54.0
Aa31LG10G780 Aethionema arabicum HOM05D007392 ORTHO05D009181 9.9e-07 57.4 84 45.2
AT1G55475 Arabidopsis thaliana HOM05D007392 ORTHO05D009181 1.3e-06 57.0 124 36.3
C03p46400 Brassica napus HOM05D007392 ORTHO05D009181 1.7e-06 56.6 142 36.6
HPP92_026624 Vanilla planifolia HOM05D007392 ORTHO05D009181 2.9e-06 55.8 136 35.3
HPP92_024836 Vanilla planifolia HOM05D007392 ORTHO05D009181 4.9e-06 55.1 137 38.7
Nn7g35849 Nelumbo nucifera HOM05D007392 ORTHO05D009181 8.4e-06 54.3 115 33.9


User provided reference genes

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