Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3786 Salvia bowleyana HOM05D002857 ORTHO05D008347 3.3e-144 515.0 259 100.0
SGA_v2.0_scaffold219G42527 Striga asiatica HOM05D002857 ORTHO05D008347 1.9e-75 286.6 253 59.3
MSTRG.27764 Avicennia marina HOM05D002857 ORTHO05D008347 1.3e-74 283.9 255 62.7
Migut.O00567 Erythranthe guttata HOM05D002857 ORTHO05D008347 1.8e-73 280.0 255 60.8
Migut.N01136 Erythranthe guttata HOM05D002857 ORTHO05D008347 2.4e-73 279.6 253 60.1
Oeu010450.1 Olea europaea HOM05D002857 ORTHO05D008347 1.1e-70 270.8 169 76.9
Cc02_g19860 Coffea canephora HOM05D002857 ORTHO05D008347 1.8e-68 263.5 162 72.8
COL.COLO4_32514 Corchorus olitorius HOM05D002857 ORTHO05D007919 3.0e-68 262.7 235 58.7
Cpa.g.sc106.48 Carica papaya HOM05D002857 ORTHO05D008347 6.7e-68 261.5 212 62.7
Manes.10G081600 Manihot esculenta HOM05D002857 ORTHO05D008347 6.7e-68 261.5 211 61.1
RcHm_v2.0_Chr6g0253801 Rosa chinensis HOM05D002857 ORTHO05D008347 1.1e-67 260.8 218 61.5
Solyc01g107020.4 Solanum lycopersicum HOM05D002857 ORTHO05D008347 1.9e-67 260.0 187 65.8
CSS0041876 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D008347 2.5e-67 259.6 210 62.4
Duzib132G1128 Durio zibethinus HOM05D002857 ORTHO05D008347 2.5e-67 259.6 238 55.9
Potri.009G088200 Populus trichocarpa HOM05D002857 ORTHO05D008347 5.6e-67 258.5 232 58.6
Actinidia34361 Actinidia chinensis HOM05D002857 ORTHO05D008347 1.3e-66 257.3 184 67.4
TAR381G0590 Trochodendron aralioides HOM05D002857 ORTHO05D008347 1.6e-66 256.9 212 62.3
TWI14G1023 Tripterygium wilfordii HOM05D002857 ORTHO05D008347 2.1e-66 256.5 168 70.2
Atru.chr5.2351 Acer truncatum HOM05D002857 ORTHO05D008347 2.8e-66 256.1 210 61.4
CANSAT35G0667 Cannabis sativa HOM05D002857 ORTHO05D008347 3.7e-66 255.8 164 70.7
FvH4_2g04342 Fragaria vesca HOM05D002857 ORTHO05D008347 4.8e-66 255.4 233 57.9
Gorai.008G020300 Gossypium raimondii HOM05D002857 ORTHO05D008347 6.2e-66 255.0 212 59.9
Thecc.02G117000 Theobroma cacao HOM05D002857 ORTHO05D008347 6.2e-66 255.0 215 61.4
vmacro19465 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 6.2e-66 255.0 198 62.1
CiPaw.05G017800 Carya illinoinensis HOM05D002857 ORTHO05D008347 8.2e-66 254.6 234 56.4
Glyma.17G078200 Glycine max HOM05D002857 ORTHO05D008347 8.2e-66 254.6 177 67.8
vmacro23229 Vaccinium macrocarpon HOM05D002857 ORTHO05D008347 8.2e-66 254.6 198 62.1
CAN.G606.59 Capsicum annuum HOM05D002857 ORTHO05D008347 1.1e-65 254.2 197 64.5
Gohir.D12G019900 Gossypium hirsutum HOM05D002857 ORTHO05D008347 1.1e-65 254.2 212 59.9
MELO3C018011.2 Cucumis melo HOM05D002857 ORTHO05D008347 1.4e-65 253.8 173 67.1
Eucgr.I01062 Eucalyptus grandis HOM05D002857 ORTHO05D008347 1.4e-65 253.8 204 57.4
Medtr4g109520 Medicago truncatula HOM05D002857 ORTHO05D008347 1.8e-65 253.4 221 60.6
Sabra09G0068300 Salix brachista HOM05D002857 ORTHO05D008347 1.8e-65 253.4 253 55.3
Ciclev10029201m.g Citrus clementina HOM05D002857 ORTHO05D008347 2.4e-65 253.1 223 59.6
QL07p014115 Quercus lobata HOM05D002857 ORTHO05D008347 2.4e-65 253.1 162 72.8
CsaV3_4G000220 Cucumis sativus L. HOM05D002857 ORTHO05D008347 3.1e-65 252.7 241 53.1
Peaxi162Scf00016g02839 Petunia axillaris HOM05D002857 ORTHO05D008347 4.0e-65 252.3 164 72.0
Prupe.8G144800 Prunus persica HOM05D002857 ORTHO05D008347 4.0e-65 252.3 198 62.6
Ca_21777_v3 Cicer arietinum L. HOM05D002857 ORTHO05D008347 5.3e-65 251.9 162 74.1
TPR.G2009 Trifolium pratense HOM05D002857 ORTHO05D008347 5.3e-65 251.9 176 69.3
Lj4g0011899 Lotus japonicus HOM05D002857 ORTHO05D008347 6.9e-65 251.5 176 66.5
Lalb_Chr06g0165111 Lupinus albus HOM05D002857 ORTHO05D008347 6.9e-65 251.5 185 66.5
Sopen01g049290 Solanum pennellii HOM05D002857 ORTHO05D008347 6.9e-65 251.5 164 70.7
Gohir.A12G019700 Gossypium hirsutum HOM05D002857 ORTHO05D008347 9.0e-65 251.1 212 59.4
Nitab4.5_0008075g0040 Nicotiana tabacum HOM05D002857 ORTHO05D008347 9.0e-65 251.1 164 72.0
PGR120G0011 Punica granatum HOM05D002857 ORTHO05D008347 1.2e-64 250.8 180 67.2
PGR142G0748 Punica granatum HOM05D002857 ORTHO05D008347 1.2e-64 250.8 180 67.2
GSVIVG01037837001 Vitis vinifera HOM05D002857 ORTHO05D008347 1.2e-64 250.8 161 72.7
Haze_10256 Corylus avellana HOM05D002857 ORTHO05D008347 1.5e-64 250.4 216 58.3
Cfa004654 Carpinus fangiana HOM05D002857 ORTHO05D008347 3.4e-64 249.2 214 57.9
EL10Ac9g22202 Beta vulgaris HOM05D002857 ORTHO05D008347 4.5e-64 248.8 177 66.7
Cfa009507 Carpinus fangiana HOM05D002857 ORTHO05D008347 5.8e-64 248.4 214 58.4
CiPaw.06G165500 Carya illinoinensis HOM05D002857 ORTHO05D008347 5.8e-64 248.4 161 70.8
Nn5g30580 Nelumbo nucifera HOM05D002857 ORTHO05D008347 5.8e-64 248.4 163 71.2
Hund00691 Selenicereus undatus HOM05D002857 ORTHO05D008347 5.8e-64 248.4 165 70.3
Lj5A219T41 Lonicera japonica HOM05D002857 ORTHO05D008347 1.0e-63 247.7 162 69.8
Sed0016408 Sechium edule HOM05D002857 ORTHO05D008347 1.0e-63 247.7 179 64.8
Dinv15807 Davidia involucrata HOM05D002857 ORTHO05D008347 1.7e-63 246.9 162 70.4
Phvul.003G185000 Phaseolus vulgaris HOM05D002857 ORTHO05D008347 3.8e-63 245.7 181 67.4
unitig_749.g13509 Utricularia gibba HOM05D002857 ORTHO05D008347 3.8e-63 245.7 163 68.7
Aqoxy6G02637 Aquilegia oxysepala HOM05D002857 ORTHO05D008347 6.5e-63 245.0 192 63.5
DCAR_001699 Daucus carota HOM05D002857 ORTHO05D008347 6.5e-63 245.0 220 56.8
HanXRQChr01g0025491 Helianthus annuus HOM05D002857 ORTHO05D008347 6.5e-63 245.0 193 63.7
Psat0s3618g0120 Pisum sativum HOM05D002857 ORTHO05D008347 6.5e-63 245.0 225 56.9
ClCG10G010270 Citrullus lanatus HOM05D002857 ORTHO05D008347 8.4e-63 244.6 209 57.4
PSO541G0380 Papaver somniferum HOM05D002857 ORTHO05D008347 2.5e-62 243.0 199 59.8
Lsat_1_v5_gn_1_103341 Lactuca sativa HOM05D002857 ORTHO05D008347 3.2e-62 242.7 232 55.2
Potri.001G293700 Populus trichocarpa HOM05D002857 ORTHO05D008347 1.2e-61 240.7 210 58.1
AUR62027003 Chenopodium quinoa HOM05D002857 ORTHO05D008347 1.6e-61 240.4 162 67.9
Nitab4.5_0001105g0010 Nicotiana tabacum HOM05D002857 ORTHO05D008347 2.1e-61 240.0 160 69.4
PGSC0003DMG400025744 Solanum tuberosum HOM05D002857 ORTHO05D008347 2.7e-61 239.6 206 58.7
Cfa010108 Carpinus fangiana HOM05D002857 ORTHO05D008347 7.9e-61 238.0 216 56.5
MD05G1100100 Malus domestica HOM05D002857 ORTHO05D008347 1.0e-60 237.7 215 55.8
Rhsim11G0151500 Rhododendron simsii HOM05D002133 ORTHO05D008347 1.8e-60 236.9 195 60.5
VMungo1215G1881 Vigna mungo HOM05D002857 ORTHO05D008347 3.0e-60 236.1 160 70.6
Rhsim11G0152900 Rhododendron simsii HOM05D002133 ORTHO05D008347 3.9e-60 235.7 228 55.7
CDE04G2041 Ceratophyllum demersum HOM05D002857 ORTHO05D008347 8.7e-60 234.6 165 65.5
MD05G1100400 Malus domestica HOM05D002857 ORTHO05D008347 8.7e-60 234.6 215 55.3
PSO675G0546 Papaver somniferum HOM05D002857 ORTHO05D008347 4.3e-59 232.3 235 53.2
BcaC08g43176 Brassica carinata HOM05D002857 ORTHO05D007919 2.8e-58 229.6 166 62.7
A06p03450 Brassica napus HOM05D002857 ORTHO05D008347 2.8e-58 229.6 166 62.7
C06p04760 Brassica napus HOM05D002857 ORTHO05D008347 2.8e-58 229.6 166 62.7
Thhalv10011799m.g Eutrema salsugineum HOM05D002857 ORTHO05D008347 2.8e-58 229.6 166 62.7
Carub.0001s3918 Capsella rubella HOM05D002857 ORTHO05D008347 4.8e-58 228.8 164 63.4
BolC6t35606H Brassica oleracea HOM05D002857 ORTHO05D008347 2.4e-57 226.5 164 62.8
BraA06t23553Z Brassica rapa HOM05D002857 ORTHO05D008347 2.4e-57 226.5 164 62.8
AL1G57550 Arabidopsis lyrata HOM05D002857 ORTHO05D008347 4.1e-57 225.7 164 62.2
BcaB07g33450 Brassica carinata HOM05D002857 ORTHO05D007919 5.3e-57 225.3 166 61.4
THA.LOC104803442 Tarenaya hassleriana HOM05D002857 ORTHO05D008347 1.7e-55 220.3 174 61.5
Aa31LG10G4120 Aethionema arabicum HOM05D002857 ORTHO05D008347 2.2e-55 219.9 163 60.7
SpUn0137_0020 Schrenkiella parvula HOM05D002857 ORTHO05D008347 2.9e-55 219.5 166 59.6
Nn3g19581 Nelumbo nucifera HOM05D002857 ORTHO05D008347 3.8e-55 219.2 161 64.6
FAN24G3287 Fragaria x ananassa HOM05D001904 ORTHO05D008347 8.5e-55 218.0 216 55.6
Ah.01g006980 Amaranthus hybridus HOM05D002857 ORTHO05D008347 2.1e-53 213.4 141 70.9
HPP92_003268 Vanilla planifolia HOM05D002857 ORTHO05D008347 6.1e-53 211.8 164 61.6
Os10g0350800 Oryza sativa ssp. japonica HOM05D002857 ORTHO05D008347 1.3e-50 204.1 173 56.6
Zm00001eb019030 Zea mays HOM05D002857 ORTHO05D008347 1.1e-49 201.1 179 55.3
SMO361G0227 Selaginella moellendorffii HOM05D002857 ORTHO05D008347 1.2e-45 187.6 163 52.8
ECA234G2213 Erigeron canadensis HOM05D002857 ORTHO05D008347 2.7e-45 186.4 128 67.2
Oeu010448.1 Olea europaea HOM05D002857 ORTHO05D008347 7.4e-43 178.3 112 77.7
Ciclev10007042m.g Citrus clementina HOM05D002857 ORTHO05D008347 1.3e-42 177.6 144 56.2
AagrBONN_evm.TU.Sc2ySwM_228.4585 Anthoceros agrestis HOM05D002857 ORTHO05D008347 4.8e-42 175.6 160 52.5
Cc06_g00270 Coffea canephora HOM05D002857 ORTHO05D008347 4.5e-40 169.1 182 53.3
Pp3c5_10320 Physcomitrium patens HOM05D002857 ORTHO05D008347 6.5e-39 165.2 175 46.9
Glyma.05G021200 Glycine max HOM05D002857 ORTHO05D008347 3.2e-38 162.9 109 70.6
arahy.Tifrunner.gnm1.ann1.AK2UKD Arachis hypogaea HOM05D002857 ORTHO05D008347 6.1e-37 158.7 111 71.2
Mapoly0121s0028 Marchantia polymorpha HOM05D002857 ORTHO05D008347 8.8e-36 154.8 176 44.3
arahy.Tifrunner.gnm1.ann1.9CW0PF Arachis hypogaea HOM05D002857 ORTHO05D008347 2.6e-35 153.3 174 52.3
arahy.Tifrunner.gnm1.ann1.JJ1SBB Arachis hypogaea HOM05D002857 ORTHO05D008347 2.6e-35 153.3 111 67.6
Ciclev10006219m.g Citrus clementina HOM05D002857 ORTHO05D008347 5.9e-32 142.1 107 61.7
CBR_g3894 Chara braunii HOM05D002857 ORTHO05D008347 2.2e-31 140.2 127 52.0
Rhsim11G0151300 Rhododendron simsii HOM05D002133 ORTHO05D002256 3.8e-31 139.4 90 71.1
SEGI_03434 Sequoiadendron giganteum HOM05D002857 ORTHO05D008347 4.8e-26 122.5 122 50.0
MCO12G139 Micromonas commoda HOM05D002857 ORTHO05D008347 1.3e-23 114.4 161 41.0
PRCOL_00006372 Prasinoderma coloniale HOM05D002857 ORTHO05D008347 2.2e-23 113.6 168 38.7
Cre05.g247150 Chlamydomonas reinhardtii HOM05D002857 ORTHO05D008347 8.0e-21 105.1 204 29.9
Sc18g0007410 Simmondsia chinensis HOM05D002857 ORTHO05D008347 1.0e-15 88.2 55 69.1
Sc18g0007450 Simmondsia chinensis HOM05D002857 ORTHO05D008347 1.0e-15 88.2 55 69.1
CARHR040040 Cardamine hirsuta HOM05D002857 ORTHO05D008347 5.0e-15 85.9 73 56.2
QL11p030572 Quercus lobata HOM05D002857 ORTHO05D008347 5.5e-14 82.4 52 65.4
AUR62030843 Chenopodium quinoa HOM05D002857 ORTHO05D008347 1.6e-13 80.9 55 63.6
Cfa021534 Carpinus fangiana HOM05D002857 ORTHO05D008347 1.8e-12 77.4 55 60.0
Nn5g29163 Nelumbo nucifera HOM05D002857 ORTHO05D008347 1.3e-07 61.2 38 73.7


User provided reference genes

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