Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3653 Salvia bowleyana HOM05D005553 ORTHO05D006866 4.8e-274 947.2 474 100.0
MSTRG.17999 Avicennia marina HOM05D005553 ORTHO05D006866 4.8e-205 718.0 477 75.5
Migut.N00626 Erythranthe guttata HOM05D005553 ORTHO05D006866 2.0e-195 686.0 478 72.4
Oeu023098.1 Olea europaea HOM05D005553 ORTHO05D006866 4.4e-174 615.1 461 65.9
Dinv12662 Davidia involucrata HOM05D005553 ORTHO05D006866 5.3e-164 581.6 475 63.2
CSS0002030 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 1.5e-158 563.5 479 61.4
PGSC0003DMG400017493 Solanum tuberosum HOM05D005553 ORTHO05D006866 2.8e-157 559.3 469 60.1
Solyc09g059600.4 Solanum lycopersicum HOM05D005553 ORTHO05D006866 1.4e-156 557.0 469 59.7
vmacro14742 Vaccinium macrocarpon HOM05D005553 ORTHO05D006866 3.1e-156 555.8 454 61.2
Lj2A1127T50 Lonicera japonica HOM05D005553 ORTHO05D006866 5.3e-156 555.1 446 64.1
Sopen09g022770 Solanum pennellii HOM05D005553 ORTHO05D006866 7.0e-156 554.7 469 59.7
Nitab4.5_0000045g0420 Nicotiana tabacum HOM05D005553 ORTHO05D006866 3.5e-155 552.4 507 57.0
Hma1.2p1_1018F.1_g248400 Hydrangea macrophylla HOM05D005553 ORTHO05D006866 4.5e-155 552.0 440 64.8
CANSAT01G0440 Cannabis sativa HOM05D005553 ORTHO05D006866 5.5e-153 545.0 467 59.1
Prupe.8G200200 Prunus persica HOM05D005553 ORTHO05D006866 7.2e-153 544.7 475 59.4
Nn1g07927 Nelumbo nucifera HOM05D005553 ORTHO05D006866 4.0e-151 538.9 472 59.5
CAN.G5.44 Capsicum annuum HOM05D005553 ORTHO05D006866 6.8e-151 538.1 467 57.2
Cc01_g16820 Coffea canephora HOM05D005553 ORTHO05D006866 6.8e-151 538.1 442 62.2
CsaV3_6G002380 Cucumis sativus L. HOM05D005553 ORTHO05D006866 8.8e-151 537.7 476 57.8
Nitab4.5_0000345g0010 Nicotiana tabacum HOM05D005553 ORTHO05D006866 3.4e-150 535.8 512 55.1
MD10G1161200 Malus domestica HOM05D005553 ORTHO05D006866 7.5e-150 534.6 473 58.8
Cfa002842 Carpinus fangiana HOM05D005553 ORTHO05D006866 9.8e-150 534.3 474 58.9
Sc05g0002010 Simmondsia chinensis HOM05D005553 ORTHO05D006866 1.7e-149 533.5 450 60.9
HanXRQChr07g0189551 Helianthus annuus HOM05D005553 ORTHO05D006866 9.1e-148 527.7 478 59.0
Potri.002G245000 Populus trichocarpa HOM05D005553 ORTHO05D006866 2.7e-147 526.2 475 59.4
Aqoxy2G03234 Aquilegia oxysepala HOM05D005553 ORTHO05D006866 5.9e-147 525.0 453 57.4
MELO3C020015.2 Cucumis melo HOM05D005553 ORTHO05D006866 7.7e-147 524.6 476 56.9
Sed0021986 Sechium edule HOM05D005553 ORTHO05D006866 1.7e-146 523.5 475 57.3
Hund05570 Selenicereus undatus HOM05D005553 ORTHO05D006866 2.9e-146 522.7 476 56.1
RcHm_v2.0_Chr6g0284311 Rosa chinensis HOM05D005553 ORTHO05D006866 1.1e-145 520.8 468 58.1
Manes.13G047900 Manihot esculenta HOM05D005553 ORTHO05D006866 3.2e-145 519.2 489 57.5
DCAR_023559 Daucus carota HOM05D005553 ORTHO05D006866 7.2e-145 518.1 470 58.5
FAN27G0725 Fragaria x ananassa HOM05D005553 ORTHO05D006866 2.8e-144 516.2 460 58.5
Cpa.g.sc8.131 Carica papaya HOM05D005553 ORTHO05D006866 3.6e-144 515.8 479 58.0
PGR044G2083 Punica granatum HOM05D005553 ORTHO05D006866 4.0e-143 512.3 472 57.0
TWI36G0825 Tripterygium wilfordii HOM05D005553 ORTHO05D006866 5.2e-143 511.9 463 58.3
Ah.08g214520 Amaranthus hybridus HOM05D005553 ORTHO05D006866 8.8e-143 511.1 461 55.3
Lsat_1_v5_gn_9_13060 Lactuca sativa HOM05D005553 ORTHO05D006866 8.8e-143 511.1 469 58.0
VMungo1383G1602 Vigna mungo HOM05D005553 ORTHO05D006866 1.2e-142 510.8 468 57.3
Lalb_Chr03g0041571 Lupinus albus HOM05D005553 ORTHO05D006866 2.6e-142 509.6 466 57.7
CSS0038931 Camellia sinensis var. sinensis HOM05D005553 ORTHO05D006866 5.7e-142 508.4 479 57.4
FAN24G0205 Fragaria x ananassa HOM05D005553 ORTHO05D006866 9.8e-142 507.7 461 57.9
Glyma.08G349700 Glycine max HOM05D005553 ORTHO05D006866 9.8e-142 507.7 462 57.1
Sabra02G0186400 Salix brachista HOM05D005553 ORTHO05D006866 9.8e-142 507.7 446 60.8
FvH4_2g18680 Fragaria vesca HOM05D005553 ORTHO05D006866 1.3e-141 507.3 462 58.2
Glyma.18G166600 Glycine max HOM05D005553 ORTHO05D006866 1.3e-141 507.3 469 56.7
PSO339G3667 Papaver somniferum HOM05D005553 ORTHO05D006866 1.3e-141 507.3 457 56.0
Phvul.008G130400 Phaseolus vulgaris HOM05D005553 ORTHO05D006866 1.1e-140 504.2 468 56.6
Rhsim01G0254300 Rhododendron simsii HOM05D005553 ORTHO05D006866 1.1e-140 504.2 452 58.0
PSO063G5023 Papaver somniferum HOM05D005553 ORTHO05D006866 3.1e-140 502.7 472 54.0
FAN15G3597 Fragaria x ananassa HOM05D005553 ORTHO05D006866 1.6e-139 500.4 464 57.3
Eucgr.K02143 Eucalyptus grandis HOM05D005553 ORTHO05D006866 2.0e-139 500.0 476 56.7
Medtr7g056117 Medicago truncatula HOM05D005553 ORTHO05D006866 5.9e-139 498.4 474 55.9
PSO782G3165 Papaver somniferum HOM05D005553 ORTHO05D006866 1.7e-138 496.9 472 53.6
Ca_24091_v3 Cicer arietinum L. HOM05D005553 ORTHO05D006866 2.3e-138 496.5 473 55.0
Lj1g0021333 Lotus japonicus HOM05D005553 ORTHO05D006866 5.0e-138 495.4 465 55.3
COL.COLO4_15644 Corchorus olitorius HOM05D005553 ORTHO05D006866 1.1e-137 494.2 468 56.2
Dinv19184 Davidia involucrata HOM05D005553 ORTHO05D006866 1.1e-137 494.2 431 58.9
Thecc.01G222300 Theobroma cacao HOM05D005553 ORTHO05D006866 1.5e-137 493.8 461 57.3
GSVIVG01038357001 Vitis vinifera HOM05D005553 ORTHO05D006866 2.5e-137 493.0 442 60.0
Ciclev10019403m.g Citrus clementina HOM05D005553 ORTHO05D006866 4.3e-137 492.3 465 57.4
Gohir.D07G206400 Gossypium hirsutum HOM05D005553 ORTHO05D006866 5.6e-137 491.9 483 56.5
Thhalv10020331m.g Eutrema salsugineum HOM05D005553 ORTHO05D006866 9.5e-137 491.1 456 57.5
Psat3g147960 Pisum sativum HOM05D005553 ORTHO05D006866 1.2e-136 490.7 472 56.1
QL09p052121 Quercus lobata HOM05D005553 ORTHO05D006866 1.2e-136 490.7 473 56.0
QL09p052989 Quercus lobata HOM05D005553 ORTHO05D006866 1.2e-136 490.7 473 56.0
THA.LOC104818968 Tarenaya hassleriana HOM05D005553 ORTHO05D006866 1.2e-136 490.7 477 55.8
Duzib138G1946 Durio zibethinus HOM05D005553 ORTHO05D006866 3.6e-136 489.2 469 56.3
Gorai.001G232700 Gossypium raimondii HOM05D005553 ORTHO05D006866 3.6e-136 489.2 484 56.6
Haze_24838 Corylus avellana HOM05D005553 ORTHO05D006866 4.7e-136 488.8 455 56.5
MBI06_g04543_MAGBIO Magnolia biondii HOM05D005553 ORTHO05D006866 4.7e-136 488.8 472 54.2
Carub.0003s0670 Capsella rubella HOM05D005553 ORTHO05D006866 8.0e-136 488.0 455 55.8
arahy.Tifrunner.gnm1.ann1.K25WW2 Arachis hypogaea HOM05D005553 ORTHO05D006866 2.3e-135 486.5 475 53.3
Sp3g06120 Schrenkiella parvula HOM05D005553 ORTHO05D006866 2.3e-135 486.5 456 57.2
Gohir.A07G200000 Gossypium hirsutum HOM05D005553 ORTHO05D006866 4.0e-135 485.7 483 56.1
Haze_24835 Corylus avellana HOM05D005553 ORTHO05D006866 6.8e-135 485.0 433 58.4
arahy.Tifrunner.gnm1.ann1.T3HSIJ Arachis hypogaea HOM05D005553 ORTHO05D006866 8.9e-135 484.6 475 52.8
AL3G18430 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.5e-134 483.8 455 56.3
CARHR081820 Cardamine hirsuta HOM05D005553 ORTHO05D006866 2.6e-134 483.0 472 54.9
AT3G07180 Arabidopsis thaliana HOM05D005553 ORTHO05D006866 3.4e-134 482.6 455 56.0
Duzib211G0174 Durio zibethinus HOM05D005553 ORTHO05D006866 9.8e-134 481.1 480 56.5
TPR.G6452 Trifolium pratense HOM05D005553 ORTHO05D006866 1.3e-133 480.7 502 53.8
BraA05t22829Z Brassica rapa HOM05D005553 ORTHO05D006866 1.7e-133 480.3 474 55.5
AL384U10020 Arabidopsis lyrata HOM05D005553 ORTHO05D006866 1.1e-132 477.6 450 56.0
BcaC05g29748 Brassica carinata HOM05D005553 ORTHO05D006866 1.1e-132 477.6 474 54.9
A05p41030 Brassica napus HOM05D005553 ORTHO05D006866 1.1e-132 477.6 474 55.7
BcaC05g29847 Brassica carinata HOM05D005553 ORTHO05D006866 3.2e-132 476.1 470 55.3
C05p60190 Brassica napus HOM05D005553 ORTHO05D006866 4.1e-132 475.7 470 55.5
BolC5t34669H Brassica oleracea HOM05D005553 ORTHO05D006866 4.1e-132 475.7 470 55.5
CiPaw.03G146800 Carya illinoinensis HOM05D005553 ORTHO05D006866 7.8e-131 471.5 398 60.1
ECA247G0750 Erigeron canadensis HOM05D005553 ORTHO05D006866 1.1e-129 467.6 470 55.1
EL10Ac7g17878 Beta vulgaris HOM05D005553 ORTHO05D006866 4.3e-129 465.7 462 52.4
Aa31LG5G17740 Aethionema arabicum HOM05D005553 ORTHO05D006866 5.6e-129 465.3 459 56.0
ClCG09G008830 Citrullus lanatus HOM05D005553 ORTHO05D006866 1.2e-128 464.2 475 52.6
ATR0609G062 Amborella trichopoda HOM05D005553 ORTHO05D006866 4.7e-128 462.2 462 52.2
Atru.chr6.1417 Acer truncatum HOM05D005553 ORTHO05D006866 1.4e-127 460.7 455 54.5
Peaxi162Scf00238g00217 Petunia axillaris HOM05D005553 ORTHO05D006866 2.9e-125 453.0 461 54.9
CDE08G1475 Ceratophyllum demersum HOM05D005553 ORTHO05D006866 2.4e-124 449.9 479 48.6
arahy.Tifrunner.gnm1.ann1.84RPTF Arachis hypogaea HOM05D005553 ORTHO05D006866 1.6e-120 437.2 464 50.9
Os01g0907300 Oryza sativa ssp. japonica HOM05D005553 ORTHO05D006866 1.4e-119 434.1 486 49.4
Zm00001eb365330 Zea mays HOM05D005553 ORTHO05D006866 1.8e-119 433.7 485 49.1
arahy.Tifrunner.gnm1.ann1.62F6YN Arachis hypogaea HOM05D005553 ORTHO05D006866 2.6e-118 429.9 448 52.2
TAR365G1156 Trochodendron aralioides HOM05D005553 ORTHO05D006866 3.7e-117 426.0 360 58.6
Actinidia09473 Actinidia chinensis HOM05D005553 ORTHO05D006866 6.2e-112 408.7 474 48.7
unitig_0.g372 Utricularia gibba HOM05D005553 ORTHO05D006866 8.1e-112 408.3 464 48.5
arahy.Tifrunner.gnm1.ann1.B0WXN9 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.2e-110 404.4 403 52.9
SHI14561 Sapria himalayana HOM05D005553 ORTHO05D006866 2.0e-110 403.7 479 46.3
AUR62001118 Chenopodium quinoa HOM05D005553 ORTHO05D006866 9.9e-110 401.4 477 45.9
Actinidia23714 Actinidia chinensis HOM05D005553 ORTHO05D006866 1.0e-106 391.3 479 49.3
DCAR_000631 Daucus carota HOM05D005553 ORTHO05D006866 8.7e-106 388.3 470 48.3
AUR62016558 Chenopodium quinoa HOM05D005553 ORTHO05D006866 5.3e-95 352.4 478 43.5
arahy.Tifrunner.gnm1.ann1.ET68I8 Arachis hypogaea HOM05D005553 ORTHO05D006866 6.7e-90 335.5 364 47.8
Potri.002G244801 Populus trichocarpa HOM05D005553 ORTHO05D006866 5.6e-89 332.4 211 73.9
QL05p022419 Quercus lobata HOM05D005553 ORTHO05D006866 3.8e-85 319.7 244 62.7
arahy.Tifrunner.gnm1.ann1.SPK719 Arachis hypogaea HOM05D005553 ORTHO05D006866 6.4e-85 318.9 387 44.7
Pp3c13_19160 Physcomitrium patens HOM05D005553 ORTHO05D006866 1.8e-82 310.8 453 41.7
arahy.Tifrunner.gnm1.ann1.YI9T1V Arachis hypogaea HOM05D005553 ORTHO05D006866 6.5e-77 292.4 403 42.9
Mapoly0045s0104 Marchantia polymorpha HOM05D005553 ORTHO05D006866 1.0e-74 285.0 480 33.8
AagrBONN_evm.TU.Sc2ySwM_117.1632 Anthoceros agrestis HOM05D005553 ORTHO05D006866 2.2e-72 277.3 431 36.9
QL02p097148 Quercus lobata HOM05D005553 ORTHO05D006866 1.1e-71 275.0 248 55.6
SMO353G0187 Selaginella moellendorffii HOM05D005553 ORTHO05D006866 2.0e-70 270.8 451 35.5
HPP92_001410 Vanilla planifolia HOM05D005553 ORTHO05D006866 6.7e-66 255.8 220 57.3
arahy.Tifrunner.gnm1.ann1.DF0SS3 Arachis hypogaea HOM05D005553 ORTHO05D006866 1.3e-56 224.9 315 42.2
CBR_g46590 Chara braunii HOM05D005553 ORTHO05D006866 1.0e-45 188.7 256 39.8
SEGI_35984 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 1.3e-29 135.2 266 34.6
HPP92_001419 Vanilla planifolia HOM05D005553 ORTHO05D008496 3.8e-21 107.1 95 54.7
arahy.Tifrunner.gnm1.ann1.UUY44J Arachis hypogaea HOM05D005553 ORTHO05D006866 5.6e-20 103.2 235 30.6
SEGI_34191 Sequoiadendron giganteum HOM05D005553 ORTHO05D006866 3.4e-17 94.0 101 39.6
TAR365G0595 Trochodendron aralioides HOM05D005553 ORTHO05D006866 1.9e-15 88.2 69 68.1
EL10Ac7g17877 Beta vulgaris HOM05D005553 ORTHO05D006866 1.6e-11 75.1 55 61.8
VMungo1383G0327 Vigna mungo HOM05D005553 ORTHO05D006866 3.1e-10 70.9 59 59.3
A05p41020 Brassica napus HOM05D005553 ORTHO05D006866 7.5e-09 66.2 116 37.9
Cfa026900 Carpinus fangiana HOM05D005553 ORTHO05D006866 2.7e-06 57.8 184 24.5


User provided reference genes

Program Settings