Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3629 Salvia bowleyana HOM05D002972 ORTHO05D002272 1.3e-151 539.7 268 100.0
SalBow3G1022 Salvia bowleyana HOM05D002972 ORTHO05D002272 2.5e-41 173.3 180 54.4
SGA_v2.0_scaffold47G17652 Striga asiatica HOM05D002972 ORTHO05D002272 2.9e-18 96.7 262 29.4
SGA_v2.0_scaffold47G17653 Striga asiatica HOM05D002972 ORTHO05D002272 6.6e-18 95.5 219 31.1
Migut.L00029 Erythranthe guttata HOM05D002972 ORTHO05D002272 9.5e-17 91.7 170 36.5
Hma1.2p1_1114F.1_g258730 Hydrangea macrophylla HOM05D002972 ORTHO05D002272 3.0e-15 86.7 178 32.6
PGSC0003DMG400002637 Solanum tuberosum HOM05D002972 ORTHO05D002272 5.2e-15 85.9 158 32.9
CSS0037442 Camellia sinensis var. sinensis HOM05D002972 ORTHO05D002272 6.8e-15 85.5 162 32.7
Sopen03g039260 Solanum pennellii HOM05D002972 ORTHO05D002272 8.9e-15 85.1 180 31.1
Peaxi162Scf00126g10126 Petunia axillaris HOM05D002972 ORTHO05D002272 3.4e-14 83.2 151 34.4
SalBow6G4808 Salvia bowleyana HOM05D002972 ORTHO05D002272 5.7e-14 82.4 166 31.3
Cc07_g10090 Coffea canephora HOM05D002972 ORTHO05D002272 9.8e-14 81.6 175 32.0
CSS0006608 Camellia sinensis var. sinensis HOM05D002972 ORTHO05D002272 4.9e-13 79.3 162 30.9
Solyc03g120360.1 Solanum lycopersicum HOM05D002972 ORTHO05D002272 4.9e-13 79.3 161 31.1
Sopen03g039250 Solanum pennellii HOM05D002972 ORTHO05D002272 6.3e-13 79.0 161 31.1
Peaxi162Scf00015g00226 Petunia axillaris HOM05D002972 ORTHO05D002272 1.4e-12 77.8 95 40.0
Rhsim08G0123100 Rhododendron simsii HOM05D002972 ORTHO05D002272 4.1e-12 76.3 161 29.2
PGSC0003DMG400002638 Solanum tuberosum HOM05D002972 ORTHO05D002272 5.4e-12 75.9 161 31.1
Nitab4.5_0003885g0010 Nicotiana tabacum HOM05D002972 ORTHO05D002272 7.0e-12 75.5 161 31.7
Nitab4.5_0003159g0070 Nicotiana tabacum HOM05D002972 ORTHO05D002272 1.2e-11 74.7 140 34.3
TWI18G1012 Tripterygium wilfordii HOM05D000555 ORTHO05D000646 7.8e-11 72.0 233 29.2
COL.COLO4_31049 Corchorus olitorius HOM05D002972 ORTHO05D002272 1.0e-10 71.6 157 28.7
CAN.G438.50 Capsicum annuum HOM05D002972 ORTHO05D002272 3.9e-10 69.7 161 31.7
Gorai.007G195600 Gossypium raimondii HOM05D000126 ORTHO05D000085 3.9e-10 69.7 138 29.7
Peaxi162Scf00015g00238 Petunia axillaris HOM05D002972 ORTHO05D002272 3.9e-10 69.7 154 30.5
Lj4A209T44 Lonicera japonica HOM05D002972 ORTHO05D002272 8.6e-10 68.6 134 33.6
Gohir.A11G175900 Gossypium hirsutum HOM05D000126 ORTHO05D000085 1.1e-09 68.2 138 29.7
Thecc.01G020000 Theobroma cacao HOM05D000126 ORTHO05D000085 1.1e-09 68.2 154 29.2
Migut.I00843 Erythranthe guttata HOM05D002972 ORTHO05D002272 3.3e-09 66.6 140 30.7
Dinv05661 Davidia involucrata HOM05D002972 ORTHO05D002272 4.3e-09 66.2 146 30.8
Dinv41127 Davidia involucrata HOM05D002972 ORTHO05D002272 9.5e-09 65.1 148 29.1
arahy.Tifrunner.gnm1.ann1.C8FNMN Arachis hypogaea HOM05D008992 ORTHO05D002272 1.2e-08 64.7 223 26.5
Dinv29033 Davidia involucrata HOM05D002972 ORTHO05D002272 1.2e-08 64.7 158 28.5
Lj4A209T45 Lonicera japonica HOM05D002972 ORTHO05D002272 1.2e-08 64.7 140 29.3
Ciclev10025208m.g Citrus clementina HOM05D000126 ORTHO05D000085 1.6e-08 64.3 95 34.7
Manes.11G065600 Manihot esculenta HOM05D000555 ORTHO05D000646 2.1e-08 63.9 157 30.6
Dinv14511 Davidia involucrata HOM05D002972 ORTHO05D002272 2.8e-08 63.5 104 32.7
TWI09G0202 Tripterygium wilfordii HOM05D002972 ORTHO05D002272 3.6e-08 63.2 143 27.3
unitig_0.g1105 Utricularia gibba HOM05D002972 ORTHO05D002272 3.6e-08 63.2 95 38.9
arahy.Tifrunner.gnm1.ann1.1MNX0Y Arachis hypogaea HOM05D008992 ORTHO05D002272 8.0e-08 62.0 140 31.4
Cpa.g.sc6.181 Carica papaya HOM05D002972 ORTHO05D002272 8.0e-08 62.0 193 25.4
Manes.01G145200 Manihot esculenta HOM05D000126 ORTHO05D000085 1.4e-07 61.2 104 32.7
ClCG02G004020 Citrullus lanatus HOM05D002972 ORTHO05D002272 1.8e-07 60.8 163 25.2
Psat0s921g0280 Pisum sativum HOM05D008992 ORTHO05D002272 2.3e-07 60.5 159 30.8
QL07p012989 Quercus lobata HOM05D030119 ORTHO05D002272 2.3e-07 60.5 106 30.2
Duzib052G0730 Durio zibethinus HOM05D002972 ORTHO05D002272 6.8e-07 58.9 270 24.1
Duzib147G1519 Durio zibethinus HOM05D000126 ORTHO05D000085 6.8e-07 58.9 158 27.2
Medtr1g112660 Medicago truncatula HOM05D002972 ORTHO05D002272 8.9e-07 58.5 158 26.6
CAN.G407.58 Capsicum annuum HOM05D000555 ORTHO05D000646 1.2e-06 58.2 133 27.8
vmacro17724 Vaccinium macrocarpon HOM05D002972 ORTHO05D002272 1.2e-06 58.2 79 38.0
CsaV3_7G001090 Cucumis sativus L. HOM05D002972 ORTHO05D002272 1.5e-06 57.8 133 24.8
Duzib264G0210 Durio zibethinus HOM05D000126 ORTHO05D000085 1.5e-06 57.8 178 25.8
CSS0002260 Camellia sinensis var. sinensis HOM05D021388 ORTHO05D021111 2.0e-06 57.4 145 29.0
MELO3C013346.2 Cucumis melo HOM05D002972 ORTHO05D002272 2.0e-06 57.4 144 23.6
Thhalv10016060m.g Eutrema salsugineum HOM05D002972 ORTHO05D002272 2.0e-06 57.4 138 28.3
Lj1g0000579 Lotus japonicus HOM05D008992 ORTHO05D002272 2.0e-06 57.4 225 24.0
Phvul.007G019100 Phaseolus vulgaris HOM05D002972 ORTHO05D002272 2.0e-06 57.4 154 22.1
Psat0s3155g0080 Pisum sativum HOM05D008992 ORTHO05D002272 2.0e-06 57.4 164 28.7
Sed0017149 Sechium edule HOM05D002972 ORTHO05D002272 2.0e-06 57.4 139 25.2
Actinidia33493 Actinidia chinensis HOM05D021388 ORTHO05D021111 2.6e-06 57.0 151 29.1
COL.COLO4_21920 Corchorus olitorius HOM05D000126 ORTHO05D002272 2.6e-06 57.0 126 28.6
QL07p013083 Quercus lobata HOM05D030119 ORTHO05D002272 2.6e-06 57.0 106 28.3
Hund14008 Selenicereus undatus HOM05D002972 ORTHO05D002272 2.6e-06 57.0 214 25.7
CiPaw.05G083100 Carya illinoinensis HOM05D002972 ORTHO05D002272 3.4e-06 56.6 259 25.1
ECA247G2469 Erigeron canadensis HOM05D000555 ORTHO05D000646 3.4e-06 56.6 89 32.6
Sabra04G0118200 Salix brachista HOM05D002972 ORTHO05D002272 3.4e-06 56.6 158 24.1
Atru.chr5.3374 Acer truncatum HOM05D002972 ORTHO05D002272 4.4e-06 56.2 120 28.3
Eucgr.I01432 Eucalyptus grandis HOM05D002972 ORTHO05D002272 4.4e-06 56.2 169 22.5
VMungo0720G1914 Vigna mungo HOM05D002972 ORTHO05D002272 4.4e-06 56.2 95 29.5
AUR62010852 Chenopodium quinoa HOM05D002972 ORTHO05D002272 5.8e-06 55.8 112 30.4
Glyma.10G281600 Glycine max HOM05D002972 ORTHO05D002272 5.8e-06 55.8 95 29.5
AUR62007622 Chenopodium quinoa HOM05D001706 ORTHO05D001789 7.5e-06 55.5 93 31.2
Ca_03843_v3 Cicer arietinum L. HOM05D008992 ORTHO05D002272 7.5e-06 55.5 139 26.6
Gorai.005G254500 Gossypium raimondii HOM05D002972 ORTHO05D002272 9.8e-06 55.1 231 23.4
Hund14010 Selenicereus undatus HOM05D002972 ORTHO05D002272 9.8e-06 55.1 152 26.3


User provided reference genes

Program Settings