Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3596 Salvia bowleyana HOM05D005940 ORTHO05D007027 5.2e-215 750.7 371 100.0
Migut.F01794 Erythranthe guttata HOM05D005940 ORTHO05D007027 5.3e-119 431.8 349 65.0
Oeu055049.1 Olea europaea HOM05D005940 ORTHO05D007027 4.7e-107 392.1 349 57.3
Nitab4.5_0000061g0280 Nicotiana tabacum HOM05D005940 ORTHO05D007027 5.2e-98 362.1 349 53.3
GSVIVG01016348001 Vitis vinifera HOM05D005940 ORTHO05D007027 1.4e-95 354.0 349 51.9
Cc09_g02600 Coffea canephora HOM05D005940 ORTHO05D007027 1.0e-93 347.8 346 52.6
Peaxi162Scf00208g00211 Petunia axillaris HOM05D005940 ORTHO05D007027 6.6e-93 345.1 349 51.3
Lj1A925T62 Lonicera japonica HOM05D005940 ORTHO05D007027 1.5e-92 344.0 347 51.0
Sed0018989 Sechium edule HOM05D005940 ORTHO05D007027 7.3e-92 341.7 349 49.3
PGSC0003DMG400010575 Solanum tuberosum HOM05D005940 ORTHO05D007027 1.2e-91 340.9 349 50.4
Hma1.2p1_0192F.1_g083550 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 4.7e-91 339.0 360 51.7
Solyc04g049890.4 Solanum lycopersicum HOM05D005940 ORTHO05D007027 8.9e-90 334.7 349 50.7
Gorai.012G093100 Gossypium raimondii HOM05D005940 ORTHO05D007027 2.0e-89 333.6 351 49.3
TAR623G0325 Trochodendron aralioides HOM05D005940 ORTHO05D007027 4.4e-89 332.4 346 49.4
Cfa001588 Carpinus fangiana HOM05D005940 ORTHO05D007027 7.5e-89 331.6 349 49.0
Atru.chr12.628 Acer truncatum HOM05D005940 ORTHO05D007027 2.9e-88 329.7 346 50.0
DCAR_019137 Daucus carota HOM05D005940 ORTHO05D007027 2.9e-88 329.7 350 49.4
Potri.010G216500 Populus trichocarpa HOM05D005940 ORTHO05D007027 6.4e-88 328.6 351 48.7
Sopen04g020430 Solanum pennellii HOM05D005940 ORTHO05D007027 8.3e-88 328.2 356 49.7
Nn2g10645 Nelumbo nucifera HOM05D005940 ORTHO05D007027 4.1e-87 325.9 356 48.6
CiPaw.02G177100 Carya illinoinensis HOM05D005940 ORTHO05D007027 1.2e-86 324.3 349 48.7
Gohir.D04G082400 Gossypium hirsutum HOM05D005940 ORTHO05D007027 1.2e-86 324.3 340 50.0
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 6.0e-86 322.0 349 49.0
ClCG02G013840 Citrullus lanatus HOM05D005940 ORTHO05D007027 7.8e-86 321.6 349 47.6
HanXRQChr16g0510921 Helianthus annuus HOM05D005940 ORTHO05D007027 7.8e-86 321.6 352 48.6
ECA232G2986 Erigeron canadensis HOM05D005940 ORTHO05D007027 1.3e-85 320.9 351 48.7
Glyma.20G145700 Glycine max HOM05D005940 ORTHO05D007027 1.3e-85 320.9 349 47.3
CANSAT25G0128 Cannabis sativa HOM05D005940 ORTHO05D007027 1.7e-85 320.5 354 46.0
Lj5g0027680 Lotus japonicus HOM05D005940 ORTHO05D007027 5.0e-85 318.9 349 47.9
QL08p056963 Quercus lobata HOM05D005940 ORTHO05D007027 1.9e-84 317.0 353 49.9
FvH4_7g20280 Fragaria vesca HOM05D005940 ORTHO05D007027 9.5e-84 314.7 349 47.9
Ciclev10033357m.g Citrus clementina HOM05D005940 ORTHO05D007027 1.2e-83 314.3 357 47.6
FAN10G2498 Fragaria x ananassa HOM05D005940 ORTHO05D007027 1.6e-83 313.9 351 47.9
Aqoxy7G03246 Aquilegia oxysepala HOM05D005940 ORTHO05D007027 6.2e-83 312.0 355 46.2
FAN06G4195 Fragaria x ananassa HOM05D005940 ORTHO05D007027 8.1e-83 311.6 349 47.6
AUR62020800 Chenopodium quinoa HOM05D005940 ORTHO05D007027 1.8e-82 310.5 344 49.4
Prupe.2G219400 Prunus persica HOM05D005940 ORTHO05D007027 1.8e-82 310.5 351 47.0
TWI38G0416 Tripterygium wilfordii HOM05D005940 ORTHO05D007027 3.1e-82 309.7 349 47.3
Duzib114G0016 Durio zibethinus HOM05D005940 ORTHO05D007027 6.8e-82 308.5 349 47.9
Prupe.2G216400 Prunus persica HOM05D005940 ORTHO05D007027 6.8e-82 308.5 351 46.7
MD01G1112500 Malus domestica HOM05D005940 ORTHO05D007027 2.0e-81 307.0 350 47.7
RcHm_v2.0_Chr1g0364231 Rosa chinensis HOM05D005940 ORTHO05D007027 4.4e-81 305.8 349 46.1
Eucgr.G02795 Eucalyptus grandis HOM05D005940 ORTHO05D007027 1.7e-80 303.9 357 46.8
PGR102G2278 Punica granatum HOM05D005940 ORTHO05D007027 1.7e-80 303.9 350 47.1
Nitab4.5_0003582g0030 Nicotiana tabacum HOM05D005940 ORTHO05D007027 4.9e-80 302.4 288 52.8
TPR.G5540 Trifolium pratense HOM05D005940 ORTHO05D007027 6.4e-80 302.0 349 42.7
CsaV3_5G006320 Cucumis sativus L. HOM05D005940 ORTHO05D007027 1.4e-79 300.8 351 45.9
Medtr1g103900 Medicago truncatula HOM05D005940 ORTHO05D007027 1.9e-79 300.4 349 44.1
Psat6g207800 Pisum sativum HOM05D005940 ORTHO05D007027 3.2e-79 299.7 338 45.9
FAN01G1689 Fragaria x ananassa HOM05D005940 ORTHO05D007027 4.1e-79 299.3 351 46.7
AUR62027909 Chenopodium quinoa HOM05D005940 ORTHO05D007027 7.1e-79 298.5 377 44.8
CAN.G693.9 Capsicum annuum HOM05D005940 ORTHO05D007027 2.7e-78 296.6 315 48.6
Lsat_1_v5_gn_1_128021 Lactuca sativa HOM05D005940 ORTHO05D007027 4.6e-78 295.8 349 46.1
Phvul.007G056900 Phaseolus vulgaris HOM05D005940 ORTHO05D007027 4.6e-78 295.8 349 44.4
PSO357G0422 Papaver somniferum HOM05D005940 ORTHO05D007027 1.3e-77 294.3 349 44.7
THA.LOC104809986 Tarenaya hassleriana HOM05D005940 ORTHO05D007027 1.3e-77 294.3 354 48.6
Medtr1g030720 Medicago truncatula HOM05D005940 ORTHO05D007027 5.1e-77 292.4 349 43.3
Ca_10908_v3 Cicer arietinum L. HOM05D005940 ORTHO05D007027 1.5e-76 290.8 337 45.4
Lalb_Chr21g0304671 Lupinus albus HOM05D005940 ORTHO05D007027 4.3e-76 289.3 350 43.7
PSO170G0010 Papaver somniferum HOM05D005940 ORTHO05D007027 4.3e-76 289.3 349 44.1
Sp5g07450 Schrenkiella parvula HOM05D005940 ORTHO05D007027 2.1e-75 287.0 355 47.3
Dinv31364 Davidia involucrata HOM05D005940 ORTHO05D007027 4.7e-75 285.8 304 50.7
EL10Ac2g03550 Beta vulgaris HOM05D005940 ORTHO05D007027 8.1e-75 285.0 343 45.8
Medtr1g103870 Medicago truncatula HOM05D005940 ORTHO05D007027 8.1e-75 285.0 351 43.0
VMungo0720G1649 Vigna mungo HOM05D005940 ORTHO05D007027 1.1e-74 284.6 338 45.3
arahy.Tifrunner.gnm1.ann1.N3JKH2 Arachis hypogaea HOM05D005940 ORTHO05D007027 5.2e-74 282.3 346 43.9
FAN03G1319 Fragaria x ananassa HOM05D005940 ORTHO05D007027 6.8e-74 282.0 327 46.8
arahy.Tifrunner.gnm1.ann1.3UA0UH Arachis hypogaea HOM05D005940 ORTHO05D007027 1.5e-73 280.8 346 44.2
Thhalv10010491m.g Eutrema salsugineum HOM05D005940 ORTHO05D007027 2.6e-73 280.0 356 45.5
C08p30200 Brassica napus HOM05D005940 ORTHO05D007027 9.9e-73 278.1 357 45.9
BolC8t50626H Brassica oleracea HOM05D005940 ORTHO05D007027 1.3e-72 277.7 354 46.3
CARHR164970 Cardamine hirsuta HOM05D005940 ORTHO05D007027 1.7e-72 277.3 353 45.3
A09p47960 Brassica napus HOM05D005940 ORTHO05D007027 2.2e-72 276.9 357 44.8
BcaB01g00141 Brassica carinata HOM05D005940 ORTHO05D007027 1.1e-71 274.6 350 47.4
AL5G36080 Arabidopsis lyrata HOM05D005940 ORTHO05D007027 1.4e-71 274.2 356 44.7
BcaNung04648 Brassica carinata HOM05D005940 ORTHO05D007027 2.4e-71 273.5 350 46.3
Hma1.2p1_0192F.1_g083560 Hydrangea macrophylla HOM05D005940 ORTHO05D007027 1.2e-70 271.2 284 52.1
BraA09t40251Z Brassica rapa HOM05D005940 ORTHO05D007027 3.9e-69 266.2 352 44.9
Thecc.10G067000 Theobroma cacao HOM05D005940 ORTHO05D007027 3.9e-69 266.2 301 46.8
Carub.0005s2159 Capsella rubella HOM05D005940 ORTHO05D007027 5.1e-69 265.8 356 45.8
Aa31sc33G20 Aethionema arabicum HOM05D005940 ORTHO05D007027 4.3e-68 262.7 374 43.0
COL.COLO4_23758 Corchorus olitorius HOM05D005940 ORTHO05D007027 8.1e-67 258.5 284 47.5
HPP92_019787 Vanilla planifolia HOM05D005940 ORTHO05D007027 6.6e-61 238.8 352 40.6
CDE11G0619 Ceratophyllum demersum HOM05D005940 ORTHO05D007027 4.3e-60 236.1 344 39.2
Zm00001eb194920 Zea mays HOM05D005940 ORTHO05D007027 2.1e-59 233.8 350 41.1
MELO3C011725.2 Cucumis melo HOM05D005940 ORTHO05D007027 3.6e-59 233.0 301 42.5
Gohir.A05G343900 Gossypium hirsutum HOM05D005940 ORTHO05D007027 2.6e-57 226.9 276 45.3
Manes.10G041400 Manihot esculenta HOM05D005940 ORTHO05D007027 8.4e-56 221.9 274 45.6
Rhsim09G0154600 Rhododendron simsii HOM05D005940 ORTHO05D007027 1.1e-55 221.5 277 46.9
ATR0594G026 Amborella trichopoda HOM05D005940 ORTHO05D007027 4.6e-54 216.1 309 40.5
Sabra10G0167600 Salix brachista HOM05D005940 ORTHO05D007027 2.3e-53 213.8 275 44.4
Haze_16942 Corylus avellana HOM05D005940 ORTHO05D007027 3.6e-51 206.5 213 49.8
Cpa.g.sc1.266 Carica papaya HOM05D005940 ORTHO05D007027 9.9e-49 198.4 282 42.9
PGR142G2620 Punica granatum HOM05D005940 ORTHO05D007027 7.1e-47 192.2 305 40.3
BcaNung04643 Brassica carinata HOM05D005940 ORTHO05D007027 3.5e-46 189.9 260 43.1
CSS0031020 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 3.3e-44 183.3 165 57.0
AagrBONN_evm.TU.Sc2ySwM_344.1014 Anthoceros agrestis HOM05D005940 ORTHO05D007027 9.6e-44 181.8 356 36.8
Hund22470 Selenicereus undatus HOM05D005940 ORTHO05D007027 9.6e-44 181.8 338 35.2
AT3G54970 Arabidopsis thaliana HOM05D005940 ORTHO05D007027 4.0e-42 176.4 277 41.5
Mapoly0016s0023 Marchantia polymorpha HOM05D005940 ORTHO05D007027 1.5e-36 157.9 318 33.0
Sc06g0001810 Simmondsia chinensis HOM05D005940 ORTHO05D007027 1.9e-36 157.5 186 45.2
SMO329G0058 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 7.6e-33 145.6 348 31.0
SMO201G0153 Selaginella moellendorffii HOM05D005940 ORTHO05D007027 1.0e-32 145.2 348 31.3
Pp3c1_190 Physcomitrium patens HOM05D005940 ORTHO05D007027 6.1e-30 136.0 340 32.1
unitig_46.g18613 Utricularia gibba HOM05D005940 ORTHO05D007027 7.9e-30 135.6 196 42.3
SEGI_22112 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 1.8e-29 134.4 201 40.3
SHI28162 Sapria himalayana HOM05D005940 ORTHO05D007027 3.3e-28 130.2 161 46.0
Os02g0252600 Oryza sativa ssp. japonica HOM05D005940 ORTHO05D007027 9.1e-26 122.1 211 39.3
CBR_g3301 Chara braunii HOM05D003248 ORTHO05D000301 3.9e-21 106.7 370 27.6
Sopen09g009530 Solanum pennellii HOM05D005940 ORTHO05D007027 3.9e-21 106.7 73 58.9
ECA240G2370 Erigeron canadensis HOM05D005940 ORTHO05D007027 6.3e-19 99.4 75 56.0
Haze_16941 Corylus avellana HOM05D005940 ORTHO05D007027 1.4e-18 98.2 96 50.0
MBI14_g28170_MAGBIO Magnolia biondii HOM05D005940 ORTHO05D007027 1.8e-18 97.8 76 55.3
Medtr1g030710 Medicago truncatula HOM05D005940 ORTHO05D007027 1.1e-15 88.6 249 28.5
SEGI_30186 Sequoiadendron giganteum HOM05D005940 ORTHO05D007027 5.5e-15 86.3 77 48.1
FAN06G2675 Fragaria x ananassa HOM05D005940 ORTHO05D007027 7.4e-12 75.9 259 29.7
CSS0026064 Camellia sinensis var. sinensis HOM05D005940 ORTHO05D007027 1.2e-09 68.6 49 57.1
TPR.G40057 Trifolium pratense HOM05D005940 ORTHO05D007027 2.6e-09 67.4 50 52.0
MCO14G149 Micromonas commoda HOM05D005940 ORTHO05D007027 4.2e-07 60.1 366 23.8
Cre01.g033516 Chlamydomonas reinhardtii HOM05D005940 ORTHO05D007027 4.7e-06 56.6 199 25.1


User provided reference genes

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