Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3584 Salvia bowleyana HOM05D006291 ORTHO05D007669 2.0e-47 192.2 102 100.0
MSTRG.10473 Avicennia marina HOM05D006291 ORTHO05D007669 5.5e-26 120.9 109 68.8
Oeu028819.1 Olea europaea HOM05D006291 ORTHO05D007669 2.8e-25 118.6 109 67.0
SGA_v2.0_scaffold21G09601 Striga asiatica HOM05D006291 ORTHO05D007669 2.8e-25 118.6 110 64.5
Duzib128G1629 Durio zibethinus HOM05D006291 ORTHO05D007669 6.1e-25 117.5 105 65.7
Duzib128G2031 Durio zibethinus HOM05D006291 ORTHO05D007669 6.1e-25 117.5 105 65.7
Actinidia02463 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.0e-24 116.7 109 66.1
Actinidia38532 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.8e-24 115.9 105 65.7
COL.COLO4_05650 Corchorus olitorius HOM05D006291 ORTHO05D007669 1.8e-24 115.9 106 65.1
ECA234G1508 Erigeron canadensis HOM05D006291 ORTHO05D007669 1.8e-24 115.9 108 63.9
Thecc.10G119800 Theobroma cacao HOM05D006291 ORTHO05D007669 1.8e-24 115.9 100 68.0
Migut.L01922 Erythranthe guttata HOM05D006291 ORTHO05D007669 2.3e-24 115.5 109 65.1
GSVIVG01032270001 Vitis vinifera HOM05D006291 ORTHO05D007669 4.0e-24 114.8 105 64.8
HanXRQChr12g0358571 Helianthus annuus HOM05D006291 ORTHO05D007669 6.8e-24 114.0 106 63.2
Manes.02G198400 Manihot esculenta HOM05D006291 ORTHO05D007669 6.8e-24 114.0 105 63.8
Nn8g40626 Nelumbo nucifera HOM05D006291 ORTHO05D007669 6.8e-24 114.0 105 62.9
DCAR_020455 Daucus carota HOM05D006291 ORTHO05D007669 8.9e-24 113.6 110 64.5
PSO170G1648 Papaver somniferum HOM05D006291 ORTHO05D007669 8.9e-24 113.6 112 60.7
PGSC0003DMG400013569 Solanum tuberosum HOM05D006291 ORTHO05D007669 8.9e-24 113.6 105 64.8
CiPaw.16G104700 Carya illinoinensis HOM05D006291 ORTHO05D007669 1.5e-23 112.8 105 63.8
PSO063G7114 Papaver somniferum HOM05D006291 ORTHO05D007669 2.0e-23 112.5 112 59.8
TAR362G0416 Trochodendron aralioides HOM05D006291 ORTHO05D007669 2.0e-23 112.5 108 63.0
arahy.Tifrunner.gnm1.ann1.8H1PJC Arachis hypogaea HOM05D006291 ORTHO05D007669 2.6e-23 112.1 110 60.0
CSS0029803 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 2.6e-23 112.1 112 58.0
Gohir.D05G287200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 2.6e-23 112.1 106 62.3
Lalb_Chr01g0007741 Lupinus albus HOM05D006291 ORTHO05D007669 3.4e-23 111.7 106 63.2
Potri.006G079700 Populus trichocarpa HOM05D006291 ORTHO05D007669 3.4e-23 111.7 107 62.6
Cc06_g23850 Coffea canephora HOM05D006291 ORTHO05D007669 5.7e-23 110.9 109 62.4
unitig_8.g3543 Utricularia gibba HOM05D006291 ORTHO05D007669 5.7e-23 110.9 106 64.2
CAN.G54.10 Capsicum annuum HOM05D006291 ORTHO05D007669 7.5e-23 110.5 109 59.6
Rhsim01G0107900 Rhododendron simsii HOM05D006291 ORTHO05D007669 7.5e-23 110.5 107 63.6
THA.LOC104826574 Tarenaya hassleriana HOM05D006291 ORTHO05D007669 7.5e-23 110.5 106 61.3
Solyc07g042620.4 Solanum lycopersicum HOM05D006291 ORTHO05D007669 9.8e-23 110.2 103 64.1
Sopen07g022310 Solanum pennellii HOM05D006291 ORTHO05D007669 9.8e-23 110.2 103 64.1
CANSAT56G1353 Cannabis sativa HOM05D006291 ORTHO05D007669 1.3e-22 109.8 106 60.4
Sc23g0004310 Simmondsia chinensis HOM05D006291 ORTHO05D007669 1.3e-22 109.8 110 58.2
Prupe.1G063000 Prunus persica HOM05D006291 ORTHO05D007669 1.7e-22 109.4 108 61.1
MD13G1231800 Malus domestica HOM05D006291 ORTHO05D007669 2.2e-22 109.0 105 60.0
arahy.Tifrunner.gnm1.ann1.SCY2K5 Arachis hypogaea HOM05D006291 ORTHO05D007669 3.7e-22 108.2 108 59.3
HanXRQChr10g0309491 Helianthus annuus HOM05D006291 ORTHO05D007669 3.7e-22 108.2 104 61.5
MD16G1236600 Malus domestica HOM05D006291 ORTHO05D007669 3.7e-22 108.2 105 60.0
VMungo1127G1563 Vigna mungo HOM05D006291 ORTHO05D007669 3.7e-22 108.2 105 61.0
CSS0003994 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.9e-22 107.8 109 60.6
CSS0013846 Camellia sinensis var. sinensis HOM05D006291 ORTHO05D007669 4.9e-22 107.8 109 60.6
Carub.0013s0004 Capsella rubella HOM05D006291 ORTHO05D007669 4.9e-22 107.8 110 56.4
Ciclev10009894m.g Citrus clementina HOM05D006291 ORTHO05D007669 4.9e-22 107.8 105 61.0
Lsat_1_v5_gn_5_80980 Lactuca sativa HOM05D006291 ORTHO05D007669 4.9e-22 107.8 103 61.2
Peaxi162Scf00474g00519 Petunia axillaris HOM05D006291 ORTHO05D007669 4.9e-22 107.8 105 61.9
Sabra06G0060300 Salix brachista HOM05D006291 ORTHO05D007669 6.3e-22 107.5 104 61.5
ATR0580G035 Amborella trichopoda HOM05D006291 ORTHO05D007669 8.3e-22 107.1 103 61.2
Gorai.009G302200 Gossypium raimondii HOM05D006291 ORTHO05D007669 8.3e-22 107.1 108 59.3
Nitab4.5_0003139g0110 Nicotiana tabacum HOM05D006291 ORTHO05D007669 8.3e-22 107.1 105 61.0
Potri.018G149200 Populus trichocarpa HOM05D006291 ORTHO05D007669 8.3e-22 107.1 104 60.6
Aqoxy7G02914 Aquilegia oxysepala HOM05D006291 ORTHO05D007669 1.1e-21 106.7 107 59.8
AUR62020734 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.1e-21 106.7 109 56.9
AUR62027977 Chenopodium quinoa HOM05D006291 ORTHO05D007669 1.1e-21 106.7 109 56.9
Glyma.13G197100 Glycine max HOM05D006291 ORTHO05D007669 1.1e-21 106.7 105 61.0
Glyma.15G235500 Glycine max HOM05D006291 ORTHO05D007669 1.1e-21 106.7 105 61.0
Lj3g0009914 Lotus japonicus HOM05D006291 ORTHO05D007669 1.1e-21 106.7 105 60.0
Phvul.011G206700 Phaseolus vulgaris HOM05D006291 ORTHO05D007669 1.1e-21 106.7 107 58.9
RcHm_v2.0_Chr4g0397141 Rosa chinensis HOM05D006291 ORTHO05D007669 1.1e-21 106.7 105 58.1
EL10Ac2g03616 Beta vulgaris HOM05D006291 ORTHO05D007669 1.4e-21 106.3 105 59.0
Psat0s418g0040 Pisum sativum HOM05D006291 ORTHO05D007669 1.8e-21 105.9 106 58.5
Hund19355 Selenicereus undatus HOM05D006291 ORTHO05D007669 1.8e-21 105.9 100 61.0
TPR.G27823 Trifolium pratense HOM05D006291 ORTHO05D007669 1.8e-21 105.9 106 58.5
Ca_23954_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.4e-21 105.5 106 58.5
Ca_23960_v3 Cicer arietinum L. HOM05D006291 ORTHO05D007669 2.4e-21 105.5 106 58.5
PGR044G0028 Punica granatum HOM05D006291 ORTHO05D007669 2.4e-21 105.5 108 61.1
HPP92_021942 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.4e-21 105.5 108 60.2
AT2G07340 Arabidopsis thaliana HOM05D006291 ORTHO05D007669 4.1e-21 104.8 106 56.6
CANSAT56G3141 Cannabis sativa HOM05D006291 ORTHO05D007669 4.1e-21 104.8 106 58.5
Eucgr.G00957 Eucalyptus grandis HOM05D006291 ORTHO05D007669 5.4e-21 104.4 105 59.0
Ah.10g032820 Amaranthus hybridus HOM05D006291 ORTHO05D007669 9.2e-21 103.6 105 58.1
FAN07G2657 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.2e-20 103.2 108 56.5
Medtr8g039140 Medicago truncatula HOM05D006291 ORTHO05D007669 1.2e-20 103.2 103 60.2
Sp6g13890 Schrenkiella parvula HOM05D006291 ORTHO05D007669 1.2e-20 103.2 101 57.4
Zm00001eb240760 Zea mays HOM05D006291 ORTHO05D007669 1.2e-20 103.2 105 55.2
FvH4_4g05950 Fragaria vesca HOM05D006291 ORTHO05D007669 1.6e-20 102.8 108 56.5
FAN22G0966 Fragaria x ananassa HOM05D006291 ORTHO05D007669 1.6e-20 102.8 108 56.5
Gohir.A05G286200 Gossypium hirsutum HOM05D006291 ORTHO05D007669 1.6e-20 102.8 99 60.6
HPP92_021968 Vanilla planifolia HOM05D006291 ORTHO05D007669 2.0e-20 102.4 107 58.9
TWI63G0490 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.7e-20 102.1 108 58.3
MBI16_g09344_MAGBIO Magnolia biondii HOM05D006291 ORTHO05D007669 3.5e-20 101.7 138 50.7
CDE06G0918 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.9e-20 100.9 104 55.8
Atru.BG.15.p Acer truncatum HOM05D006291 ORTHO05D007669 1.0e-19 100.1 98 61.2
Thhalv10015026m.g Eutrema salsugineum HOM05D006291 ORTHO05D007669 1.0e-19 100.1 104 55.8
CsaV3_2G009230 Cucumis sativus L. HOM05D006291 ORTHO05D007669 1.7e-19 99.4 100 62.0
CDE02G3570 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 2.3e-19 99.0 102 56.9
FAN12G2114 Fragaria x ananassa HOM05D006291 ORTHO05D007669 8.6e-19 97.1 108 54.6
AL3G44130 Arabidopsis lyrata HOM05D006291 ORTHO05D007669 1.1e-18 96.7 99 57.6
BcaB01g04158 Brassica carinata HOM05D006291 ORTHO05D007669 1.9e-18 95.9 114 52.6
Mapoly0027s0144 Marchantia polymorpha HOM05D006291 ORTHO05D007669 4.3e-18 94.7 107 53.3
CDE06G1428 Ceratophyllum demersum HOM05D006291 ORTHO05D007669 5.6e-18 94.4 104 55.8
SMO200G0161 Selaginella moellendorffii HOM05D006291 ORTHO05D007669 9.5e-18 93.6 108 50.0
A03p16050 Brassica napus HOM05D006291 ORTHO05D007669 1.2e-17 93.2 101 52.5
Aa31LG8G11030 Aethionema arabicum HOM05D006291 ORTHO05D007669 1.6e-17 92.8 149 43.0
BcaC01g06135 Brassica carinata HOM05D006291 ORTHO05D007669 2.8e-17 92.0 105 50.5
C03p18890 Brassica napus HOM05D006291 ORTHO05D007669 2.8e-17 92.0 105 50.5
Sed0008839 Sechium edule HOM05D006291 ORTHO05D007669 2.8e-17 92.0 100 58.0
Dinv26485 Davidia involucrata HOM05D006291 ORTHO05D007669 1.0e-16 90.1 101 57.4
MELO3C003910.2 Cucumis melo HOM05D006291 ORTHO05D007669 6.8e-16 87.4 98 56.1
Pp3c19_4350 Physcomitrium patens HOM05D006291 ORTHO05D007669 2.6e-15 85.5 106 50.0
AagrBONN_evm.TU.Sc2ySwM_362.1895 Anthoceros agrestis HOM05D006291 ORTHO05D007669 4.1e-13 78.2 102 45.1
Actinidia02472 Actinidia chinensis HOM05D006291 ORTHO05D007669 8.6e-11 70.5 41 82.9
Actinidia07563 Actinidia chinensis HOM05D006291 ORTHO05D007669 1.6e-09 66.2 38 86.8
Dinv12620 Davidia involucrata HOM05D006291 ORTHO05D007669 1.6e-09 66.2 43 76.7
TWI32G0019 Tripterygium wilfordii HOM05D006291 ORTHO05D007669 2.1e-09 65.9 101 44.6
Nitab4.5_0000170g0080 Nicotiana tabacum HOM05D006291 ORTHO05D007669 1.1e-08 63.5 41 75.6
Cpa.g.sc91.61 Carica papaya HOM05D006291 ORTHO05D007669 1.8e-08 62.8 35 88.6
vmacro20755 Vaccinium macrocarpon HOM05D006291 ORTHO05D007669 3.1e-08 62.0 35 85.7
ClCG11G011210 Citrullus lanatus HOM05D006291 ORTHO05D007669 4.0e-08 61.6 39 74.4
CARHR104040 Cardamine hirsuta HOM05D006291 ORTHO05D007669 5.2e-08 61.2 39 74.4
Os02g0462900 Oryza sativa ssp. japonica HOM05D006291 ORTHO05D007669 5.2e-08 61.2 47 61.7
Nitab4.5_0002603g0030 Nicotiana tabacum HOM05D006291 ORTHO05D007669 6.8e-08 60.8 41 73.2
BolC3t14280H Brassica oleracea HOM05D006291 ORTHO05D007669 8.9e-08 60.5 39 71.8
Haze_19088 Corylus avellana HOM05D000287 ORTHO05D000319 8.9e-08 60.5 41 75.6
SEGI_05817 Sequoiadendron giganteum HOM05D006291 ORTHO05D007669 4.4e-07 58.2 39 71.8
BcaB08g35517 Brassica carinata HOM05D006291 ORTHO05D007669 1.3e-06 56.6 36 75.0
BcaC04g20645 Brassica carinata HOM05D006291 ORTHO05D007669 2.9e-06 55.5 40 67.5
BraA03t10896Z Brassica rapa HOM05D006291 ORTHO05D007669 4.9e-06 54.7 36 69.4
BolC3t14281H Brassica oleracea HOM05D006291 ORTHO05D007669 8.3e-06 53.9 37 70.3


User provided reference genes

Program Settings