Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3382 Salvia bowleyana HOM05D006897 ORTHO05D008825 1.1e-74 283.1 135 100.0
Sopen10g033350 Solanum pennellii HOM05D006897 ORTHO05D008825 9.9e-31 137.1 132 53.8
PGSC0003DMG400028283 Solanum tuberosum HOM05D006897 ORTHO05D008825 1.3e-30 136.7 132 53.0
Migut.J00586 Erythranthe guttata HOM05D006897 ORTHO05D008825 2.2e-30 136.0 132 53.0
unitig_27.g25382 Utricularia gibba HOM05D006897 ORTHO05D008825 2.2e-30 136.0 125 55.2
Cc06_g04460 Coffea canephora HOM05D006897 ORTHO05D008825 2.9e-30 135.6 125 54.4
Nitab4.5_0000527g0030 Nicotiana tabacum HOM05D006897 ORTHO05D008825 6.4e-30 134.4 132 52.3
Nitab4.5_0002626g0030 Nicotiana tabacum HOM05D000468 ORTHO05D000548 6.4e-30 134.4 132 52.3
Nitab4.5_0009369g0010 Nicotiana tabacum HOM05D006897 ORTHO05D008825 6.4e-30 134.4 132 52.3
CSS0029455 Camellia sinensis var. sinensis HOM05D006897 ORTHO05D008825 7.1e-29 131.0 130 50.8
Medtr7g102930 Medicago truncatula HOM05D006897 ORTHO05D008825 7.1e-29 131.0 132 47.7
Solyc10g083910.3 Solanum lycopersicum HOM05D006897 ORTHO05D008825 7.1e-29 131.0 127 52.8
MSTRG.5772 Avicennia marina HOM05D006897 ORTHO05D008825 1.2e-28 130.2 125 52.8
Dinv35807 Davidia involucrata HOM05D006897 ORTHO05D008825 1.2e-28 130.2 131 52.7
MD12G1108500 Malus domestica HOM05D006897 ORTHO05D008825 3.5e-28 128.6 131 50.4
SGA_v2.0_scaffold40G15485 Striga asiatica HOM05D006897 ORTHO05D008825 3.5e-28 128.6 125 53.6
Oeu041483.1 Olea europaea HOM05D006897 ORTHO05D008825 4.6e-28 128.3 125 52.0
TWI74G0074 Tripterygium wilfordii HOM05D006897 ORTHO05D008825 6.0e-28 127.9 130 49.2
Cfa017644 Carpinus fangiana HOM05D006897 ORTHO05D008825 7.8e-28 127.5 132 49.2
Manes.08G012300 Manihot esculenta HOM05D006897 ORTHO05D008825 7.8e-28 127.5 131 48.9
ECA233G4308 Erigeron canadensis HOM05D000468 ORTHO05D000548 1.0e-27 127.1 131 45.8
Prupe.7G126900 Prunus persica HOM05D006897 ORTHO05D008825 1.0e-27 127.1 131 48.9
RcHm_v2.0_Chr3g0470611 Rosa chinensis HOM05D006897 ORTHO05D008825 1.7e-27 126.3 131 45.0
Sabra06G0096400 Salix brachista HOM05D006897 ORTHO05D008825 1.7e-27 126.3 130 50.0
Lj1g0004142 Lotus japonicus HOM05D006897 ORTHO05D008825 2.3e-27 125.9 131 47.3
Sed0006529 Sechium edule HOM05D006897 ORTHO05D008825 3.0e-27 125.6 130 46.9
MD04G1090000 Malus domestica HOM05D006897 ORTHO05D008825 6.6e-27 124.4 131 48.9
Potri.006G122200 Populus trichocarpa HOM05D006897 ORTHO05D008825 6.6e-27 124.4 130 49.2
Sed0016332 Sechium edule HOM05D006897 ORTHO05D008825 8.7e-27 124.0 131 47.3
GSVIVG01033669001 Vitis vinifera HOM05D006897 ORTHO05D008825 8.7e-27 124.0 132 47.7
Cpa.g.sc92.100 Carica papaya HOM05D006897 ORTHO05D008825 1.9e-26 122.9 130 47.7
Ca_08918_v3 Cicer arietinum L. HOM05D006897 ORTHO05D008825 1.9e-26 122.9 131 44.3
Lsat_1_v5_gn_6_28260 Lactuca sativa HOM05D006897 ORTHO05D008825 1.9e-26 122.9 131 45.0
Lalb_Chr01g0018621 Lupinus albus HOM05D006897 ORTHO05D008825 1.9e-26 122.9 134 46.3
Medtr0050s0130 Medicago truncatula HOM05D006897 ORTHO05D008825 1.9e-26 122.9 129 46.5
Nitab4.5_0000063g0200 Nicotiana tabacum HOM05D006897 ORTHO05D008825 1.9e-26 122.9 132 50.0
VMungo1383G3501 Vigna mungo HOM05D006897 ORTHO05D008825 1.9e-26 122.9 132 45.5
Aqoxy1G01120 Aquilegia oxysepala HOM05D006897 ORTHO05D008825 2.5e-26 122.5 130 47.7
Hund26628 Selenicereus undatus HOM05D006897 ORTHO05D008825 3.3e-26 122.1 131 45.8
Glyma.19G185800 Glycine max HOM05D006897 ORTHO05D008825 4.3e-26 121.7 132 46.2
Atru.chr8.1762 Acer truncatum HOM05D006897 ORTHO05D008825 5.6e-26 121.3 131 45.8
MBI04_g13674_MAGBIO Magnolia biondii HOM05D000468 ORTHO05D000548 7.3e-26 120.9 132 45.5
Phvul.001G180700 Phaseolus vulgaris HOM05D006897 ORTHO05D008825 7.3e-26 120.9 132 45.5
Eucgr.A01649 Eucalyptus grandis HOM05D006897 ORTHO05D008825 9.6e-26 120.6 131 48.9
HanXRQChr13g0400941 Helianthus annuus HOM05D006897 ORTHO05D008825 9.6e-26 120.6 132 43.2
Psat3g039920 Pisum sativum HOM05D006897 ORTHO05D008825 9.6e-26 120.6 132 45.5
TPR.G32809 Trifolium pratense HOM05D006897 ORTHO05D008825 9.6e-26 120.6 132 45.5
EL10Ac7g16667 Beta vulgaris HOM05D006897 ORTHO05D008825 1.6e-25 119.8 131 45.0
FvH4_6g16650 Fragaria vesca HOM05D006897 ORTHO05D008825 1.6e-25 119.8 131 43.5
FAN05G5588 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.6e-25 119.8 131 43.5
FAN09G4221 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.6e-25 119.8 131 43.5
FAN14G2109 Fragaria x ananassa HOM05D006897 ORTHO05D008825 1.6e-25 119.8 131 43.5
Ciclev10013772m.g Citrus clementina HOM05D006897 ORTHO05D008825 2.1e-25 119.4 130 45.4
FAN05G2962 Fragaria x ananassa HOM05D006897 ORTHO05D008825 2.1e-25 119.4 131 42.7
arahy.Tifrunner.gnm1.ann1.12U4ZA Arachis hypogaea HOM05D006897 ORTHO05D008825 3.6e-25 118.6 132 43.2
Glyma.03G185300 Glycine max HOM05D006897 ORTHO05D008825 6.2e-25 117.9 132 44.7
Gohir.A11G323600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 6.2e-25 117.9 131 45.0
Gohir.D11G342700 Gossypium hirsutum HOM05D006897 ORTHO05D008825 6.2e-25 117.9 131 45.0
Gorai.007G372800 Gossypium raimondii HOM05D006897 ORTHO05D008825 6.2e-25 117.9 131 45.0
CiPaw.09G169900 Carya illinoinensis HOM05D006897 ORTHO05D008825 8.1e-25 117.5 132 47.0
Nn2g13847 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.4e-24 116.7 132 43.9
TAR623G0762 Trochodendron aralioides HOM05D000468 ORTHO05D000548 1.4e-24 116.7 132 44.7
CsaV3_3G036130 Cucumis sativus L. HOM05D006897 ORTHO05D008825 3.1e-24 115.5 130 44.6
COL.COLO4_26923 Corchorus olitorius HOM05D006897 ORTHO05D008825 6.9e-24 114.4 131 43.5
PSO063G5108 Papaver somniferum HOM05D006897 ORTHO05D008825 1.2e-23 113.6 130 43.8
HanXRQChr13g0388291 Helianthus annuus HOM05D006897 ORTHO05D008825 1.5e-23 113.2 125 43.2
PSO339G3187 Papaver somniferum HOM05D006897 ORTHO05D008825 1.5e-23 113.2 130 43.1
AL4G33030 Arabidopsis lyrata HOM05D006897 ORTHO05D008825 2.6e-23 112.5 130 41.5
AT2G36835 Arabidopsis thaliana HOM05D006897 ORTHO05D008825 5.8e-23 111.3 130 40.8
QL07p042737 Quercus lobata HOM05D006897 ORTHO05D008825 5.8e-23 111.3 176 38.1
AUR62026928 Chenopodium quinoa HOM05D006897 ORTHO05D008825 1.3e-22 110.2 131 43.5
Nn6g35243 Nelumbo nucifera HOM05D006897 ORTHO05D008825 1.3e-22 110.2 132 43.9
Sc02g0001520 Simmondsia chinensis HOM05D006897 ORTHO05D008825 1.3e-22 110.2 124 42.7
BcaC02g11805 Brassica carinata HOM05D006897 ORTHO05D008825 1.7e-22 109.8 130 40.0
A05p09040 Brassica napus HOM05D006897 ORTHO05D008825 1.7e-22 109.8 130 40.0
C04p11190 Brassica napus HOM05D006897 ORTHO05D008825 1.7e-22 109.8 130 40.0
BolC4t22765H Brassica oleracea HOM05D006897 ORTHO05D008825 1.7e-22 109.8 130 40.0
BraA05t19865Z Brassica rapa HOM05D006897 ORTHO05D008825 1.7e-22 109.8 130 40.0
Gohir.D04G109600 Gossypium hirsutum HOM05D006897 ORTHO05D008825 1.7e-22 109.8 124 44.4
AUR62041582 Chenopodium quinoa HOM05D006897 ORTHO05D008825 2.2e-22 109.4 131 43.5
Os01g0776700 Oryza sativa ssp. japonica HOM05D006897 ORTHO05D008825 2.2e-22 109.4 131 38.9
BcaB02g09328 Brassica carinata HOM05D006897 ORTHO05D008825 2.9e-22 109.0 130 39.2
Carub.0004s1868 Capsella rubella HOM05D006897 ORTHO05D008825 2.9e-22 109.0 130 40.0
Sp4g19090 Schrenkiella parvula HOM05D006897 ORTHO05D008825 3.8e-22 108.6 130 39.2
Thhalv10017426m.g Eutrema salsugineum HOM05D006897 ORTHO05D008825 4.9e-22 108.2 130 39.2
ClCG10G019960 Citrullus lanatus HOM05D006897 ORTHO05D008825 6.4e-22 107.8 138 41.3
CARHR131290 Cardamine hirsuta HOM05D006897 ORTHO05D008825 8.4e-22 107.5 130 39.2
CDE05G1066 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 8.4e-22 107.5 132 40.9
Aa31LG5G22050 Aethionema arabicum HOM05D006897 ORTHO05D008825 1.1e-21 107.1 130 38.5
Dinv37330 Davidia involucrata HOM05D006897 ORTHO05D000180 1.4e-21 106.7 63 74.6
Gorai.009G413700 Gossypium raimondii HOM05D006897 ORTHO05D008825 3.2e-21 105.5 124 43.5
MELO3C009375.2 Cucumis melo HOM05D006897 ORTHO05D008825 4.2e-21 105.1 146 39.7
CDE02G4617 Ceratophyllum demersum HOM05D006897 ORTHO05D008825 7.1e-21 104.4 132 40.2
Actinidia32484 Actinidia chinensis HOM05D006897 ORTHO05D008825 7.9e-20 100.9 62 69.4
Zm00001eb369960 Zea mays HOM05D006897 ORTHO05D008825 7.9e-20 100.9 133 36.8
Duzib093G0551 Durio zibethinus HOM05D006897 ORTHO05D008825 1.0e-19 100.5 131 41.2
Lj3A989T53 Lonicera japonica HOM05D006897 ORTHO05D008825 1.0e-19 100.5 108 50.0
HPP92_010241 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.3e-19 99.4 132 37.1
HPP92_010447 Vanilla planifolia HOM05D006897 ORTHO05D008825 2.3e-19 99.4 132 37.1
Peaxi162Scf00311g01426 Petunia axillaris HOM05D006897 ORTHO05D008825 3.9e-19 98.6 109 47.7
Rhsim04G0141800 Rhododendron simsii HOM05D006897 ORTHO05D008825 8.7e-19 97.4 67 62.7
Haze_20509 Corylus avellana HOM05D006897 ORTHO05D008825 3.3e-18 95.5 110 46.4
Zm00001eb151640 Zea mays HOM05D006897 ORTHO05D008825 2.1e-17 92.8 133 34.6
Duzib106G0008 Durio zibethinus HOM05D006897 ORTHO05D008825 6.2e-17 91.3 60 66.7
Thecc.05G070500 Theobroma cacao HOM05D006897 ORTHO05D008825 1.2e-15 87.0 116 41.4
Pp3c2_31470 Physcomitrium patens HOM05D006897 ORTHO05D008825 1.2e-12 77.0 136 31.6
SEGI_02421 Sequoiadendron giganteum HOM05D006897 ORTHO05D008825 2.1e-12 76.3 129 32.6
SMO134G0180 Selaginella moellendorffii HOM05D006897 ORTHO05D008825 3.5e-12 75.5 70 47.1
Mapoly0013s0170 Marchantia polymorpha HOM05D006897 ORTHO05D008825 1.0e-11 73.9 136 30.1
AagrBONN_evm.TU.Sc2ySwM_228.4541 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.1e-10 70.5 60 48.3
AagrBONN_evm.TU.Sc2ySwM_340.262 Anthoceros agrestis HOM05D006897 ORTHO05D008825 1.9e-10 69.7 60 48.3
HPP92_010165 Vanilla planifolia HOM05D006897 ORTHO05D008825 5.3e-08 61.6 102 32.4
Sabra16G0184400 Salix brachista HOM05D004505 ORTHO05D005249 2.6e-07 59.3 43 58.1
Sabra04G0106300 Salix brachista HOM05D006897 ORTHO05D008825 3.4e-07 58.9 39 64.1
Rhsim04G0141900 Rhododendron simsii HOM05D006897 ORTHO05D008825 5.8e-07 58.2 35 71.4
Actinidia31321 Actinidia chinensis HOM05D006897 ORTHO05D008825 2.2e-06 56.2 39 64.1


User provided reference genes

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