Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3254 Salvia bowleyana HOM05D001917 ORTHO05D010068 1.4e-176 622.9 316 100.0
Migut.F00844 Erythranthe guttata HOM05D001917 ORTHO05D010068 4.6e-55 219.2 310 46.5
MSTRG.9031 Avicennia marina HOM05D001917 ORTHO05D010068 7.9e-55 218.4 310 46.1
Oeu033274.1 Olea europaea HOM05D001917 ORTHO05D010068 5.1e-46 189.1 322 40.7
Dinv08583 Davidia involucrata HOM05D001917 ORTHO05D010068 2.0e-45 187.2 318 40.9
Oeu009250.1 Olea europaea HOM05D001917 ORTHO05D010068 9.7e-45 184.9 343 39.1
Actinidia34061 Actinidia chinensis HOM05D001917 ORTHO05D010068 8.2e-44 181.8 307 42.7
Atru.chr12.1073 Acer truncatum HOM05D001917 ORTHO05D010068 1.0e-41 174.9 312 39.1
GSVIVG01034617001 Vitis vinifera HOM05D001917 ORTHO05D010068 1.4e-40 171.0 310 38.4
Hma1.2p1_0926F.1_g237550 Hydrangea macrophylla HOM05D001917 ORTHO05D010068 7.2e-40 168.7 309 40.5
Cc02_g09360 Coffea canephora HOM05D001917 ORTHO05D010068 2.7e-39 166.8 309 39.5
AUR62034488 Chenopodium quinoa HOM05D001917 ORTHO05D010068 8.8e-38 161.8 311 36.3
Potri.008G018400 Populus trichocarpa HOM05D001917 ORTHO05D010068 3.3e-37 159.8 340 35.0
Rhsim03G0096000 Rhododendron simsii HOM05D001917 ORTHO05D010068 4.4e-37 159.5 341 36.4
Eucgr.J00290 Eucalyptus grandis HOM05D001917 ORTHO05D010068 7.4e-37 158.7 314 36.9
PGSC0003DMG400001999 Solanum tuberosum HOM05D001917 ORTHO05D010068 1.7e-36 157.5 305 37.7
AUR62034166 Chenopodium quinoa HOM05D001917 ORTHO05D010068 2.8e-36 156.8 311 37.0
CiPaw.13G043900 Carya illinoinensis HOM05D001917 ORTHO05D010068 3.7e-36 156.4 319 37.6
Sopen11g002380 Solanum pennellii HOM05D001917 ORTHO05D010068 4.8e-36 156.0 308 38.0
Solyc11g006490.2 Solanum lycopersicum HOM05D001917 ORTHO05D010068 6.3e-36 155.6 308 38.0
Peaxi162Scf00120g01525 Petunia axillaris HOM05D001917 ORTHO05D010068 1.1e-35 154.8 310 38.1
Prupe.2G072200 Prunus persica HOM05D001917 ORTHO05D010068 1.2e-34 151.4 308 36.7
CARHR208440 Cardamine hirsuta HOM05D001917 ORTHO05D010068 3.5e-34 149.8 343 35.3
QL04p047945 Quercus lobata HOM05D001917 ORTHO05D010068 4.5e-34 149.4 346 36.4
Hund22265 Selenicereus undatus HOM05D001917 ORTHO05D010068 7.7e-34 148.7 305 34.8
Sp6g37990 Schrenkiella parvula HOM05D001917 ORTHO05D010068 1.3e-33 147.9 309 36.2
CSS0002594 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 1.9e-32 144.1 274 40.9
Nitab4.5_0009933g0010 Nicotiana tabacum HOM05D001917 ORTHO05D010068 1.9e-32 144.1 307 36.5
Ciclev10016047m.g Citrus clementina HOM05D001917 ORTHO05D010068 3.2e-32 143.3 316 36.7
CANSAT56G3891 Cannabis sativa HOM05D001917 ORTHO05D010068 5.5e-32 142.5 309 35.6
AL6G14500 Arabidopsis lyrata HOM05D001917 ORTHO05D010068 7.2e-32 142.1 307 35.8
PGR044G0163 Punica granatum HOM05D001917 ORTHO05D010068 7.2e-32 142.1 317 35.0
CAN.G143.42 Capsicum annuum HOM05D001917 ORTHO05D010068 2.7e-31 140.2 283 37.1
TAR636G1510 Trochodendron aralioides HOM05D001917 ORTHO05D010068 2.7e-31 140.2 306 37.6
AT5G04840 Arabidopsis thaliana HOM05D001917 ORTHO05D010068 6.7e-30 135.6 289 36.7
Sc09g0005080 Simmondsia chinensis HOM05D001917 ORTHO05D010068 5.7e-29 132.5 310 35.2
Sed0005533 Sechium edule HOM05D001917 ORTHO05D010068 2.8e-28 130.2 317 31.9
Aa31LG11G5870 Aethionema arabicum HOM05D001917 ORTHO05D010068 3.7e-28 129.8 320 34.4
Potri.010G242800 Populus trichocarpa HOM05D001917 ORTHO05D010068 3.7e-28 129.8 280 38.6
Sabra10G0189800 Salix brachista HOM05D001917 ORTHO05D010068 8.2e-28 128.6 280 39.3
Thhalv10014187m.g Eutrema salsugineum HOM05D001917 ORTHO05D010068 1.8e-27 127.5 307 33.6
vmacro07272 Vaccinium macrocarpon HOM05D001917 ORTHO05D010068 3.1e-27 126.7 311 35.4
Hund06808 Selenicereus undatus HOM05D001917 ORTHO05D010068 4.1e-27 126.3 345 31.9
MELO3C012332.2 Cucumis melo HOM05D001917 ORTHO05D010068 5.3e-27 125.9 319 31.3
Nn6g34689 Nelumbo nucifera HOM05D001917 ORTHO05D010068 3.5e-26 123.2 284 34.9
BolC9t59949H Brassica oleracea HOM05D001917 ORTHO05D010068 5.9e-26 122.5 306 32.7
BraA10t45183Z Brassica rapa HOM05D001917 ORTHO05D010068 1.7e-25 120.9 307 32.2
C09p72040 Brassica napus HOM05D001917 ORTHO05D010068 2.2e-25 120.6 308 33.1
A10p31370 Brassica napus HOM05D001917 ORTHO05D010068 5.0e-25 119.4 307 31.9
ClCG05G021960 Citrullus lanatus HOM05D001917 ORTHO05D010068 6.5e-25 119.0 316 31.6
Lsat_1_v5_gn_2_105921 Lactuca sativa HOM05D001917 ORTHO05D010068 1.5e-24 117.9 304 33.9
THA.LOC104816474 Tarenaya hassleriana HOM05D001917 ORTHO05D010068 1.5e-24 117.9 309 32.7
CsaV3_5G035190 Cucumis sativus L. HOM05D001917 ORTHO05D010068 1.9e-24 117.5 319 31.0
Ah.04g162550 Amaranthus hybridus HOM05D001917 ORTHO05D010068 4.2e-24 116.3 312 33.7
ECA238G0804 Erigeron canadensis HOM05D001917 ORTHO05D010068 9.4e-24 115.2 342 33.6
Lj2A35T44 Lonicera japonica HOM05D001917 ORTHO05D010068 2.1e-23 114.0 291 32.6
Cfa010522 Carpinus fangiana HOM05D001917 ORTHO05D010068 2.7e-23 113.6 316 34.2
HPP92_013376 Vanilla planifolia HOM05D001917 ORTHO05D010068 2.3e-22 110.5 313 32.3
Carub.0006s0372 Capsella rubella HOM05D001917 ORTHO05D010068 8.8e-22 108.6 311 31.5
Sabra08G0012000 Salix brachista HOM05D001917 ORTHO05D010068 1.2e-21 108.2 223 38.1
HanXRQChr02g0053591 Helianthus annuus HOM05D001917 ORTHO05D010068 2.0e-21 107.5 250 34.0
Nitab4.5_0001781g0130 Nicotiana tabacum HOM05D001917 ORTHO05D010068 5.7e-21 105.9 308 31.5
Zm00001eb243050 Zea mays HOM05D001917 ORTHO05D010068 2.2e-20 104.0 338 31.4
Zm00001eb181550 Zea mays HOM05D001917 ORTHO05D010068 3.7e-20 103.2 334 31.7
ATR0772G184 Amborella trichopoda HOM05D001917 ORTHO05D010068 1.1e-19 101.7 372 26.6
CSS0044781 Camellia sinensis var. sinensis HOM05D001917 ORTHO05D010068 4.1e-19 99.8 184 40.2
BcaC06g32191 Brassica carinata HOM05D001917 ORTHO05D010068 1.6e-18 97.8 270 31.1
Os02g0538900 Oryza sativa ssp. japonica HOM05D001917 ORTHO05D010068 1.3e-17 94.7 337 29.7
Dinv08577 Davidia involucrata HOM05D001917 ORTHO05D010068 8.5e-17 92.0 96 55.2
Haze_03462 Corylus avellana HOM05D001917 ORTHO05D010068 3.2e-16 90.1 367 27.8
CDE06G0681 Ceratophyllum demersum HOM05D001917 ORTHO05D010068 1.5e-13 81.3 374 26.2
Rhsim03G0095000 Rhododendron simsii HOM05D001917 ORTHO05D010068 1.1e-11 75.1 284 28.5
Thecc.10G117300 Theobroma cacao HOM05D001917 ORTHO05D010068 3.1e-11 73.6 194 34.0
CDE08G1625 Ceratophyllum demersum HOM05D001917 ORTHO05D010068 7.7e-10 68.9 253 26.5
Cpa.g.sc33.133 Carica papaya HOM05D001917 ORTHO05D010068 5.0e-09 66.2 241 31.1
Migut.C01294 Erythranthe guttata HOM05D001917 ORTHO05D002790 8.6e-09 65.5 261 30.3
Oeu049834.1 Olea europaea HOM05D001917 ORTHO05D002790 8.6e-09 65.5 340 27.9
Oeu049833.1 Olea europaea HOM05D001917 ORTHO05D002790 1.5e-08 64.7 340 27.9
Lalb_Chr15g0090721 Lupinus albus HOM05D001917 ORTHO05D002790 3.3e-08 63.5 358 25.7
MBI04_g14398_MAGBIO Magnolia biondii HOM05D001917 ORTHO05D002790 5.6e-08 62.8 192 27.6
Nn6g34691 Nelumbo nucifera HOM05D001917 ORTHO05D010068 7.2e-08 62.4 60 50.0
ATR1136G107 Amborella trichopoda HOM05D001917 ORTHO05D002790 9.5e-08 62.0 298 28.2
Eucgr.G00399 Eucalyptus grandis HOM05D001917 ORTHO05D002790 9.5e-08 62.0 347 24.8
HanXRQChr06g0181281 Helianthus annuus HOM05D001917 ORTHO05D002790 2.1e-07 60.8 334 24.6
Lj5A255T86 Lonicera japonica HOM05D001917 ORTHO05D002790 3.6e-07 60.1 146 34.9
Zm00001eb152810 Zea mays HOM05D002172 ORTHO05D002167 3.6e-07 60.1 159 34.0
CDE02G3937 Ceratophyllum demersum HOM05D002172 ORTHO05D002167 4.7e-07 59.7 243 28.4
SGA_v2.0_scaffold24G10578 Striga asiatica HOM05D001917 ORTHO05D002790 6.1e-07 59.3 272 28.7
arahy.Tifrunner.gnm1.ann1.900H0A Arachis hypogaea HOM05D001917 ORTHO05D002790 1.8e-06 57.8 344 24.7
Carub.0002s0651 Capsella rubella HOM05D001917 ORTHO05D002790 1.8e-06 57.8 353 25.2
ATR0661G486 Amborella trichopoda HOM05D001917 ORTHO05D002790 2.3e-06 57.4 134 34.3
Dinv19392 Davidia involucrata HOM05D001917 ORTHO05D002790 2.3e-06 57.4 300 25.7
MBI03_g13496_MAGBIO Magnolia biondii HOM05D001917 ORTHO05D002790 4.0e-06 56.6 170 35.9
Manes.02G083200 Manihot esculenta HOM05D001917 ORTHO05D002790 4.0e-06 56.6 283 25.8
arahy.Tifrunner.gnm1.ann1.AY0SR4 Arachis hypogaea HOM05D001917 ORTHO05D002790 5.2e-06 56.2 346 23.7
BraA01t02948Z Brassica rapa HOM05D001917 ORTHO05D002790 5.2e-06 56.2 327 24.5
CSS0009595 Camellia sinensis var. sinensis HOM05D002172 ORTHO05D002167 5.2e-06 56.2 132 34.8
PSO170G4920 Papaver somniferum HOM05D001917 ORTHO05D002790 6.8e-06 55.8 168 31.5
PSO782G0466 Papaver somniferum HOM05D001917 ORTHO05D002790 6.8e-06 55.8 168 31.5
Peaxi162Scf00384g00069 Petunia axillaris HOM05D002172 ORTHO05D002167 6.8e-06 55.8 133 33.8
Atru.chr6.697 Acer truncatum HOM05D001917 ORTHO05D002790 8.9e-06 55.5 345 28.1
ECA240G0453 Erigeron canadensis HOM05D001917 ORTHO05D002790 8.9e-06 55.5 160 31.2


User provided reference genes

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