Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3215 Salvia bowleyana HOM05D001815 ORTHO05D001830 4.1e-124 448.0 211 100.0
Migut.L01546 Erythranthe guttata HOM05D001815 ORTHO05D001830 1.3e-40 170.6 213 42.3
SalBow1G4097 Salvia bowleyana HOM05D001815 ORTHO05D001830 4.2e-28 129.0 216 37.5
SalBow3G2274 Salvia bowleyana HOM05D001815 ORTHO05D352257 4.4e-25 119.0 81 72.8
Gohir.A12G140150 Gossypium hirsutum HOM05D001815 ORTHO05D001830 6.3e-24 115.2 226 29.6
SGA_v2.0_scaffold460G51961 Striga asiatica HOM05D001815 ORTHO05D001830 7.0e-23 111.7 218 31.2
Nn4g22136 Nelumbo nucifera HOM05D001815 ORTHO05D001830 1.5e-22 110.5 160 35.6
Rhsim01G0140700 Rhododendron simsii HOM05D001815 ORTHO05D001830 4.5e-22 109.0 207 33.8
TAR475G0004 Trochodendron aralioides HOM05D001815 ORTHO05D001830 4.5e-22 109.0 197 30.5
Gohir.D12G144700 Gossypium hirsutum HOM05D001815 ORTHO05D001830 1.3e-21 107.5 227 29.1
Gorai.008G156100 Gossypium raimondii HOM05D001815 ORTHO05D001830 1.3e-21 107.5 227 29.1
Potri.001G067100 Populus trichocarpa HOM05D001815 ORTHO05D001830 1.7e-21 107.1 221 30.8
Sabra01G0046600 Salix brachista HOM05D001815 ORTHO05D001830 4.7e-19 99.0 183 30.1
Eucgr.B03554 Eucalyptus grandis HOM05D001815 ORTHO05D001830 8.0e-19 98.2 228 28.9
Hma1.2p1_0787F.1_g217870 Hydrangea macrophylla HOM05D001815 ORTHO05D001830 1.8e-18 97.1 212 27.8
MBI07_g41900_MAGBIO Magnolia biondii HOM05D001815 ORTHO05D001830 1.5e-17 94.0 185 30.3
Atru.chr12.1408 Acer truncatum HOM05D001815 ORTHO05D001830 5.7e-17 92.0 181 30.4
Migut.K01059 Erythranthe guttata HOM05D001815 ORTHO05D001830 1.3e-16 90.9 185 29.7
CDE02G4496 Ceratophyllum demersum HOM05D001815 ORTHO05D001830 2.6e-14 83.2 179 27.9
GSVIVG01001082001 Vitis vinifera HOM05D001815 ORTHO05D001830 1.7e-13 80.5 161 31.7
CDE06G2706 Ceratophyllum demersum HOM05D001815 ORTHO05D001830 5.5e-12 75.5 203 25.1
AT1G17100 Arabidopsis thaliana HOM05D001815 ORTHO05D001830 1.6e-11 73.9 156 27.6
vmacro16075 Vaccinium macrocarpon HOM05D001815 ORTHO05D001830 4.7e-11 72.4 179 26.8
A06p13000 Brassica napus HOM05D001815 ORTHO05D001830 6.1e-11 72.0 158 27.2
BolC5t30255H Brassica oleracea HOM05D001815 ORTHO05D001830 6.1e-11 72.0 158 27.2
BraA06t24458Z Brassica rapa HOM05D001815 ORTHO05D001830 6.1e-11 72.0 158 27.2
Thhalv10008655m.g Eutrema salsugineum HOM05D001815 ORTHO05D001830 8.0e-11 71.6 156 27.6
Hma1.2p1_0325F.1_g125910 Hydrangea macrophylla HOM05D001815 ORTHO05D001830 8.0e-11 71.6 182 25.8
MSTRG.15016 Avicennia marina HOM05D001815 ORTHO05D001830 1.0e-10 71.2 198 25.8
BcaB03g16022 Brassica carinata HOM05D001815 ORTHO05D001830 1.0e-10 71.2 199 25.1
Carub.0001s1683 Capsella rubella HOM05D001815 ORTHO05D001830 1.0e-10 71.2 156 26.9
AL1G29300 Arabidopsis lyrata HOM05D001815 ORTHO05D001830 1.8e-10 70.5 158 25.9
AT1G78450 Arabidopsis thaliana HOM05D001815 ORTHO05D001830 2.3e-10 70.1 163 25.8
C05p15460 Brassica napus HOM05D001815 ORTHO05D001830 2.3e-10 70.1 158 26.6
Sp1g15220 Schrenkiella parvula HOM05D001815 ORTHO05D001830 3.0e-10 69.7 158 25.9
Sopen07g030110 Solanum pennellii HOM05D001815 ORTHO05D001830 3.0e-10 69.7 217 24.9
Ca_23980_v3 Cicer arietinum L. HOM05D001815 ORTHO05D001830 4.0e-10 69.3 163 28.2
Solyc07g061790.3 Solanum lycopersicum HOM05D001815 ORTHO05D001830 4.0e-10 69.3 217 24.9
Aqoxy2G03849 Aquilegia oxysepala HOM05D001815 ORTHO05D001830 5.2e-10 68.9 181 26.5
RhsimUnG0205000 Rhododendron simsii HOM05D001815 ORTHO05D001830 5.2e-10 68.9 193 25.4
Migut.M00599 Erythranthe guttata HOM05D001815 ORTHO05D001830 6.8e-10 68.6 207 25.1
SEGI_24065 Sequoiadendron giganteum HOM05D001815 ORTHO05D001830 6.8e-10 68.6 158 27.2
BcaB02g06685 Brassica carinata HOM05D001815 ORTHO05D001830 8.8e-10 68.2 158 25.9
Lj1A818T17 Lonicera japonica HOM05D001815 ORTHO05D001830 8.8e-10 68.2 222 25.7
Cpa.g.sc77.85 Carica papaya HOM05D001815 ORTHO05D001830 1.2e-09 67.8 179 24.0
Duzib213G0047 Durio zibethinus HOM05D001815 ORTHO05D001830 1.2e-09 67.8 159 28.3
Sp5g33550 Schrenkiella parvula HOM05D001815 ORTHO05D001830 1.2e-09 67.8 190 24.7
MSTRG.12847 Avicennia marina HOM05D001815 ORTHO05D001830 1.5e-09 67.4 181 26.0
TPR.G16479 Trifolium pratense HOM05D000544 ORTHO05D001830 1.5e-09 67.4 154 28.6
C06p52380 Brassica napus HOM05D001815 ORTHO05D001830 2.0e-09 67.0 158 23.4
TWI14G0237 Tripterygium wilfordii HOM05D001815 ORTHO05D001830 2.0e-09 67.0 188 26.1
BolC6t40258H Brassica oleracea HOM05D001815 ORTHO05D001830 2.6e-09 66.6 158 23.4
Cc05_g10400 Coffea canephora HOM05D001815 ORTHO05D001830 2.6e-09 66.6 181 24.3
BcaB03g16019 Brassica carinata HOM05D001815 ORTHO05D001830 3.4e-09 66.2 183 24.0
Glyma.02G019600 Glycine max HOM05D001815 ORTHO05D001830 3.4e-09 66.2 192 23.4
Nn4g26577 Nelumbo nucifera HOM05D001815 ORTHO05D001830 3.4e-09 66.2 188 25.0
Sabra16G0249700 Salix brachista HOM05D001815 ORTHO05D001830 3.4e-09 66.2 194 27.3
A07p43740 Brassica napus HOM05D001815 ORTHO05D001830 4.4e-09 65.9 156 23.7
BraA07t31883Z Brassica rapa HOM05D001815 ORTHO05D001830 4.4e-09 65.9 156 23.7
DCAR_013789 Daucus carota HOM05D001815 ORTHO05D001830 5.7e-09 65.5 205 26.3
Peaxi162Scf00111g00924 Petunia axillaris HOM05D001815 ORTHO05D020311 5.7e-09 65.5 221 25.3
vmacro09428 Vaccinium macrocarpon HOM05D001815 ORTHO05D001830 5.7e-09 65.5 193 24.9
CAN.G375.89 Capsicum annuum HOM05D001815 ORTHO05D001830 7.5e-09 65.1 165 25.5
Manes.03G091032 Manihot esculenta HOM05D001815 ORTHO05D001830 7.5e-09 65.1 156 27.6
Thecc.07G145400 Theobroma cacao HOM05D001815 ORTHO05D001830 9.8e-09 64.7 159 28.9
HanXRQChr10g0305701 Helianthus annuus HOM05D001815 ORTHO05D001830 1.3e-08 64.3 219 24.2
QL04p070114 Quercus lobata HOM05D001815 ORTHO05D001830 1.3e-08 64.3 167 25.1
Dinv26678 Davidia involucrata HOM05D001815 ORTHO05D001830 1.7e-08 63.9 192 25.5
PGR083G2498 Punica granatum HOM05D001815 ORTHO05D001830 1.7e-08 63.9 165 26.1
THA.LOC104813983 Tarenaya hassleriana HOM05D001815 ORTHO05D001830 1.7e-08 63.9 168 24.4
Aa31LG7G1920 Aethionema arabicum HOM05D001815 ORTHO05D001830 2.2e-08 63.5 160 23.8
Potri.001G379000 Populus trichocarpa HOM05D001815 ORTHO05D001830 2.2e-08 63.5 192 25.5
Lalb_Chr19g0133621 Lupinus albus HOM05D001815 ORTHO05D001830 2.8e-08 63.2 156 23.7
Psat4g136760 Pisum sativum HOM05D001815 ORTHO05D001830 2.8e-08 63.2 159 26.4
PGSC0003DMG400027630 Solanum tuberosum HOM05D001815 ORTHO05D001830 2.8e-08 63.2 191 24.6
COL.COLO4_17427 Corchorus olitorius HOM05D001815 ORTHO05D001830 3.7e-08 62.8 158 27.8
EL10Ac4g08493 Beta vulgaris HOM05D001815 ORTHO05D001830 4.8e-08 62.4 181 24.9
CAN.G375.90 Capsicum annuum HOM05D001815 ORTHO05D001830 4.8e-08 62.4 196 25.5
CDE02G4739 Ceratophyllum demersum HOM05D001815 ORTHO05D001830 4.8e-08 62.4 158 24.1
DCAR_013788 Daucus carota HOM05D001815 ORTHO05D001830 4.8e-08 62.4 182 23.1
ECA234G3837 Erigeron canadensis HOM05D001815 ORTHO05D001830 4.8e-08 62.4 189 24.3
Glyma.06G226900 Glycine max HOM05D001815 ORTHO05D001830 4.8e-08 62.4 184 27.2
Glyma.06G227000 Glycine max HOM05D001815 ORTHO05D001830 4.8e-08 62.4 184 27.7
Prupe.4G150500 Prunus persica HOM05D001815 ORTHO05D001830 4.8e-08 62.4 166 27.1
MSTRG.23147 Avicennia marina HOM05D001815 ORTHO05D001830 6.3e-08 62.0 152 27.6
Phvul.011G173900 Phaseolus vulgaris HOM05D001815 ORTHO05D001830 6.3e-08 62.0 191 25.1
HPP92_004049 Vanilla planifolia HOM05D001815 ORTHO05D001830 6.3e-08 62.0 158 27.8
BcaC08g47418 Brassica carinata HOM05D001815 ORTHO05D001830 8.3e-08 61.6 158 23.4
FAN11G0591 Fragaria x ananassa HOM05D001815 ORTHO05D001830 8.3e-08 61.6 180 25.0
Lalb_Chr05g0228321 Lupinus albus HOM05D001815 ORTHO05D001830 8.3e-08 61.6 215 24.7
PSO541G1351 Papaver somniferum HOM05D001815 ORTHO05D001830 8.3e-08 61.6 161 27.3
Zm00001eb120200 Zea mays HOM05D001815 ORTHO05D001830 8.3e-08 61.6 158 24.7
ATR0733G060 Amborella trichopoda HOM05D001815 ORTHO05D001830 1.1e-07 61.2 157 28.0
CAN.G375.88 Capsicum annuum HOM05D001815 ORTHO05D001830 1.1e-07 61.2 214 23.4
CDE06G0414 Ceratophyllum demersum HOM05D001815 ORTHO05D001830 1.1e-07 61.2 158 24.1
FAN21G2157 Fragaria x ananassa HOM05D001815 ORTHO05D001830 1.1e-07 61.2 180 25.0
FAN21G2691 Fragaria x ananassa HOM05D001815 ORTHO05D001830 1.1e-07 61.2 180 25.0
MBI07_g26351_MAGBIO Magnolia biondii HOM05D001815 ORTHO05D001830 1.1e-07 61.2 158 27.8
VMungo1127G0210 Vigna mungo HOM05D001815 ORTHO05D001830 1.1e-07 61.2 160 23.8
Glyma.01G044000 Glycine max HOM05D001815 ORTHO05D001830 1.4e-07 60.8 164 25.0
Medtr8g461390 Medicago truncatula HOM05D001815 ORTHO05D001830 1.4e-07 60.8 160 25.6
Nitab4.5_0001140g0220 Nicotiana tabacum HOM05D001815 ORTHO05D001830 1.4e-07 60.8 191 23.6
Nitab4.5_0006614g0010 Nicotiana tabacum HOM05D001815 ORTHO05D001830 1.4e-07 60.8 194 23.7
QL03p058681 Quercus lobata HOM05D001815 ORTHO05D001830 1.4e-07 60.8 153 28.1
arahy.Tifrunner.gnm1.ann1.SEKD5X Arachis hypogaea HOM05D001815 ORTHO05D001830 1.8e-07 60.5 221 23.5
CSS0003616 Camellia sinensis var. sinensis HOM05D001815 ORTHO05D001830 1.8e-07 60.5 173 24.3
Gohir.A01G042200 Gossypium hirsutum HOM05D001815 ORTHO05D001830 1.8e-07 60.5 180 26.1
Gohir.D01G030200 Gossypium hirsutum HOM05D001815 ORTHO05D001830 1.8e-07 60.5 180 26.1
Gorai.002G039700 Gossypium raimondii HOM05D001815 ORTHO05D001830 1.8e-07 60.5 180 26.1
SGA_v2.0_scaffold73G24344 Striga asiatica HOM05D001815 ORTHO05D001830 1.8e-07 60.5 166 25.3
TAR627G0127 Trochodendron aralioides HOM05D001815 ORTHO05D001830 1.8e-07 60.5 158 27.2
arahy.Tifrunner.gnm1.ann1.QR9HB8 Arachis hypogaea HOM05D001815 ORTHO05D001830 2.4e-07 60.1 194 23.7
CANSAT56G0607 Cannabis sativa HOM05D001815 ORTHO05D001830 2.4e-07 60.1 160 23.8
FvH4_3g16830 Fragaria vesca HOM05D001815 ORTHO05D001830 2.4e-07 60.1 180 24.4
Lsat_1_v5_gn_5_125561 Lactuca sativa HOM05D001815 ORTHO05D001830 2.4e-07 60.1 191 25.7
Os01g0210500 Oryza sativa ssp. japonica HOM05D001815 ORTHO05D001830 2.4e-07 60.1 159 25.2
RcHm_v2.0_Chr5g0028041 Rosa chinensis HOM05D001815 ORTHO05D001830 2.4e-07 60.1 180 25.0
Aqoxy3G02837 Aquilegia oxysepala HOM05D001815 ORTHO05D001830 3.1e-07 59.7 154 27.9
Cfa019461 Carpinus fangiana HOM05D001815 ORTHO05D001830 3.1e-07 59.7 169 22.5
FAN16G1693 Fragaria x ananassa HOM05D001815 ORTHO05D001830 3.1e-07 59.7 159 25.8
Sabra15G0104200 Salix brachista HOM05D001815 ORTHO05D001830 3.1e-07 59.7 155 28.4
Eucgr.B00246 Eucalyptus grandis HOM05D001815 ORTHO05D001830 4.1e-07 59.3 151 27.8
Hund02763 Selenicereus undatus HOM05D001815 ORTHO05D001830 4.1e-07 59.3 151 29.8
Ah.06g187460 Amaranthus hybridus HOM05D001815 ORTHO05D001830 5.4e-07 58.9 193 24.4
MD11G1160600 Malus domestica HOM05D001815 ORTHO05D001830 7.0e-07 58.5 155 28.4
COL.COLO4_21768 Corchorus olitorius HOM05D001815 ORTHO05D001830 9.1e-07 58.2 98 35.7
HanXRQChr11g0348301 Helianthus annuus HOM05D001815 ORTHO05D001830 9.1e-07 58.2 153 29.4
AUR62008181 Chenopodium quinoa HOM05D001815 ORTHO05D001830 1.2e-06 57.8 149 30.2
Lsat_1_v5_gn_4_75660 Lactuca sativa HOM05D001815 ORTHO05D001830 1.2e-06 57.8 184 26.6
Pp3c4_25180 Physcomitrium patens HOM05D001815 ORTHO05D001830 1.2e-06 57.8 154 28.6
SGA_v2.0_scaffold90G27883 Striga asiatica HOM05D001815 ORTHO05D001830 1.2e-06 57.8 156 26.3
AUR62028762 Chenopodium quinoa HOM05D001815 ORTHO05D001830 1.6e-06 57.4 149 30.2
Haze_07545 Corylus avellana HOM05D001815 ORTHO05D001830 1.6e-06 57.4 152 28.3
TWI39G0426 Tripterygium wilfordii HOM05D001815 ORTHO05D001830 1.6e-06 57.4 179 24.6
TAR629G0524 Trochodendron aralioides HOM05D001815 ORTHO05D001830 1.6e-06 57.4 163 25.8
AUR62037967 Chenopodium quinoa HOM05D001815 ORTHO05D001830 2.0e-06 57.0 161 24.8
Hund02315 Selenicereus undatus HOM05D001815 ORTHO05D001830 2.0e-06 57.0 158 24.7
AUR62043085 Chenopodium quinoa HOM05D001815 ORTHO05D001830 2.7e-06 56.6 161 25.5
Lalb_Chr19g0133631 Lupinus albus HOM05D001815 ORTHO05D001830 2.7e-06 56.6 155 23.2
SalBow8G3045 Salvia bowleyana HOM05D001815 ORTHO05D001830 2.7e-06 56.6 203 21.7
unitig_37.g12023 Utricularia gibba HOM05D001815 ORTHO05D001830 2.7e-06 56.6 215 22.8
CiPaw.05G184700 Carya illinoinensis HOM05D001815 ORTHO05D001830 4.5e-06 55.8 146 28.8
Sc03g0011030 Simmondsia chinensis HOM05D001815 ORTHO05D001830 4.5e-06 55.8 191 23.0
TWI39G0478 Tripterygium wilfordii HOM05D001815 ORTHO05D001830 4.5e-06 55.8 147 28.6
Gorai.005G180400 Gossypium raimondii HOM05D001815 ORTHO05D001830 5.9e-06 55.5 141 27.0
Peaxi162Scf00089g01729 Petunia axillaris HOM05D001815 ORTHO05D001830 5.9e-06 55.5 190 26.8
QL10p008913 Quercus lobata HOM05D001815 ORTHO05D001830 5.9e-06 55.5 159 26.4
Gohir.D02G160300 Gossypium hirsutum HOM05D001815 ORTHO05D001830 7.7e-06 55.1 141 27.0
Potri.010G044200 Populus trichocarpa HOM05D001815 ORTHO05D001830 7.7e-06 55.1 139 26.6


User provided reference genes

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