Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3117 Salvia bowleyana HOM05D001944 ORTHO05D002405 0.0e+00 2274.6 1281 100.0
MSTRG.18675 Avicennia marina HOM05D001944 ORTHO05D002405 1.3e-50 206.5 1452 23.8
MSTRG.12332 Avicennia marina HOM05D001944 ORTHO05D002405 2.2e-47 195.7 1137 25.6
MSTRG.17786 Avicennia marina HOM05D001944 ORTHO05D002405 8.2e-42 177.2 1264 23.9
Migut.N02586 Erythranthe guttata HOM05D001944 ORTHO05D002405 1.1e-35 156.8 1036 25.1
Migut.D02244 Erythranthe guttata HOM05D001944 ORTHO05D002405 1.5e-32 146.4 1038 25.0
Oeu056301.1 Olea europaea HOM05D001944 ORTHO05D002405 1.4e-30 139.8 325 33.8
Oeu013469.1 Olea europaea HOM05D001944 ORTHO05D002405 1.4e-25 123.2 341 30.2
Dinv01067 Davidia involucrata HOM05D001944 ORTHO05D002405 6.7e-20 104.4 570 27.7
Oeu002984.1 Olea europaea HOM05D001944 ORTHO05D002405 2.6e-19 102.4 235 32.8
Sopen06g005090 Solanum pennellii HOM05D001944 ORTHO05D002405 4.4e-19 101.7 1041 22.5
Hma1.2p1_0307F.1_g119910 Hydrangea macrophylla HOM05D001944 ORTHO05D002405 9.7e-19 100.5 326 27.0
Manes.03G122401 Manihot esculenta HOM05D001944 ORTHO05D002405 1.4e-17 96.7 482 27.0
Actinidia07154 Actinidia chinensis HOM05D001944 ORTHO05D002405 2.4e-17 95.9 306 28.4
CSS0012038 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 1.6e-16 93.2 304 29.9
Solyc06g010240.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 3.5e-16 92.0 1040 22.1
SGA_v2.0_scaffold180G39633 Striga asiatica HOM05D001944 ORTHO05D002405 4.5e-16 91.7 153 38.6
Sc21g0003900 Simmondsia chinensis HOM05D001944 ORTHO05D002405 1.3e-15 90.1 294 27.9
Cc01_g10870 Coffea canephora HOM05D001944 ORTHO05D002405 5.0e-15 88.2 445 26.5
SGA_v2.0_scaffold127G34027 Striga asiatica HOM05D001944 ORTHO05D002405 8.5e-15 87.4 145 34.5
Oeu056302.1 Olea europaea HOM05D001944 ORTHO05D002405 1.1e-14 87.0 213 31.9
Prupe.6G104600 Prunus persica HOM05D001944 ORTHO05D002405 1.1e-14 87.0 511 24.3
Lj2C1021G5 Lonicera japonica HOM05D001944 ORTHO05D002405 1.5e-14 86.7 175 36.6
Dinv32718 Davidia involucrata HOM05D001944 ORTHO05D002405 3.2e-14 85.5 351 26.8
MD03G1121600 Malus domestica HOM05D001944 ORTHO05D002405 9.4e-14 84.0 262 28.2
Nitab4.5_0006619g0010 Nicotiana tabacum HOM05D001944 ORTHO05D002405 9.4e-14 84.0 326 27.0
CAN.G171.6 Capsicum annuum HOM05D001944 ORTHO05D002405 1.6e-13 83.2 1047 22.3
Cfa011296 Carpinus fangiana HOM05D001944 ORTHO05D002405 2.1e-13 82.8 257 31.9
GSVIVG01025215001 Vitis vinifera HOM05D001944 ORTHO05D002405 2.7e-13 82.4 365 27.9
Actinidia03719 Actinidia chinensis HOM05D001944 ORTHO05D002405 3.6e-13 82.0 199 31.2
Peaxi162Scf00167g00092 Petunia axillaris HOM05D001944 ORTHO05D002405 3.6e-13 82.0 199 34.7
Potri.004G212700 Populus trichocarpa HOM05D001944 ORTHO05D002405 3.6e-13 82.0 429 27.0
Peaxi162Scf00948g00114 Petunia axillaris HOM05D001944 ORTHO05D002405 4.7e-13 81.6 332 30.4
EL10Ac9g22555 Beta vulgaris HOM05D001944 ORTHO05D002405 1.0e-12 80.5 350 26.3
Nitab4.5_0000181g0180 Nicotiana tabacum HOM05D001944 ORTHO05D002405 1.4e-12 80.1 1095 22.7
Rhsim01G0215200 Rhododendron simsii HOM05D001944 ORTHO05D014293 1.8e-12 79.7 242 31.8
Dinv32719 Davidia involucrata HOM05D001944 ORTHO05D002405 3.0e-12 79.0 211 31.3
Nitab4.5_0006619g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 3.0e-12 79.0 291 33.0
Nitab4.5_0000602g0020 Nicotiana tabacum HOM05D001944 ORTHO05D002405 4.0e-12 78.6 364 26.1
TAR636G3431 Trochodendron aralioides HOM05D001944 ORTHO05D002405 4.0e-12 78.6 199 30.2
Hund01491 Selenicereus undatus HOM05D001944 ORTHO05D002405 8.8e-12 77.4 274 29.2
Thecc.09G343900 Theobroma cacao HOM05D001944 ORTHO05D002405 8.8e-12 77.4 485 25.6
CsaV3_1G013920 Cucumis sativus L. HOM05D001944 ORTHO05D002405 1.2e-11 77.0 350 26.6
vmacro14422 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 1.5e-11 76.6 243 30.0
Nitab4.5_0006532g0030 Nicotiana tabacum HOM05D001944 ORTHO05D002405 2.6e-11 75.9 467 25.3
TWI79G1706 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 3.4e-11 75.5 509 23.8
Prupe.6G104700 Prunus persica HOM05D001944 ORTHO05D002405 4.4e-11 75.1 270 27.8
AUR62029226 Chenopodium quinoa HOM05D001944 ORTHO05D002405 5.7e-11 74.7 308 28.6
MELO3C004905.2 Cucumis melo HOM05D001944 ORTHO05D002405 5.7e-11 74.7 303 29.0
Potri.013G006000 Populus trichocarpa HOM05D001944 ORTHO05D002405 7.5e-11 74.3 470 24.5
Actinidia20444 Actinidia chinensis HOM05D001944 ORTHO05D002405 9.8e-11 73.9 237 32.9
Thecc.05G062600 Theobroma cacao HOM05D001944 ORTHO05D002405 9.8e-11 73.9 375 28.3
TAR369G0775 Trochodendron aralioides HOM05D001944 ORTHO05D002405 1.7e-10 73.2 380 27.1
MD11G1139900 Malus domestica HOM05D001944 ORTHO05D002405 2.2e-10 72.8 983 22.5
ClCG03G002980 Citrullus lanatus HOM05D001944 ORTHO05D002405 3.7e-10 72.0 385 25.7
Lj1A201T35 Lonicera japonica HOM05D001944 ORTHO05D011318 3.7e-10 72.0 76 44.7
Lalb_Chr01g0004401 Lupinus albus HOM05D001944 ORTHO05D011318 4.8e-10 71.6 287 26.1
CAN.G631.45 Capsicum annuum HOM05D000550 ORTHO05D009781 6.3e-10 71.2 342 27.8
Gorai.009G108800 Gossypium raimondii HOM05D001944 ORTHO05D002405 8.3e-10 70.9 98 36.7
Nn2g13727 Nelumbo nucifera HOM05D001944 ORTHO05D002405 1.1e-09 70.5 141 34.8
Ciclev10027663m.g Citrus clementina HOM05D001944 ORTHO05D002405 1.4e-09 70.1 450 25.8
Ca_01379_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 1.8e-09 69.7 219 31.1
Ca_01395_v3 Cicer arietinum L. HOM05D001944 ORTHO05D002405 1.8e-09 69.7 219 31.1
Duzib168G0647 Durio zibethinus HOM05D001944 ORTHO05D002405 1.8e-09 69.7 258 27.9
QL01p026770 Quercus lobata HOM05D001944 ORTHO05D002405 1.8e-09 69.7 483 24.6
TWI31G0996 Tripterygium wilfordii HOM05D001944 ORTHO05D002405 2.4e-09 69.3 88 39.8
vmacro03215 Vaccinium macrocarpon HOM05D001944 ORTHO05D002405 2.4e-09 69.3 435 25.5
Actinidia20443 Actinidia chinensis HOM05D001944 ORTHO05D014293 3.1e-09 68.9 367 24.3
CSS0042132 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 3.1e-09 68.9 124 32.3
Haze_23780 Corylus avellana HOM05D001944 ORTHO05D002405 4.1e-09 68.6 90 43.3
Gohir.A05G105000 Gossypium hirsutum HOM05D001944 ORTHO05D002405 4.1e-09 68.6 102 35.3
Rhsim13G0096400 Rhododendron simsii HOM05D001944 ORTHO05D002405 4.1e-09 68.6 488 26.0
Lalb_Chr24g0394751 Lupinus albus HOM05D001944 ORTHO05D002405 7.0e-09 67.8 270 27.8
TPR.G11481 Trifolium pratense HOM05D001944 ORTHO05D002405 7.0e-09 67.8 118 37.3
ECA238G1293 Erigeron canadensis HOM05D001944 ORTHO05D002405 9.1e-09 67.4 193 29.0
Medtr2g095030 Medicago truncatula HOM05D001944 ORTHO05D002405 1.2e-08 67.0 321 25.9
FAN16G2569 Fragaria x ananassa HOM05D001944 ORTHO05D002405 2.0e-08 66.2 447 23.5
Gohir.D05G104800 Gossypium hirsutum HOM05D001944 ORTHO05D002405 2.0e-08 66.2 188 26.1
Potri.005G010133 Populus trichocarpa HOM05D001944 ORTHO05D002405 3.5e-08 65.5 230 28.3
arahy.Tifrunner.gnm1.ann1.02PMC1 Arachis hypogaea HOM05D001944 ORTHO05D002405 5.9e-08 64.7 305 26.9
arahy.Tifrunner.gnm1.ann1.D4VV12 Arachis hypogaea HOM05D001944 ORTHO05D002405 5.9e-08 64.7 307 27.7
Gohir.A08G199401 Gossypium hirsutum HOM05D001944 ORTHO05D002405 5.9e-08 64.7 332 24.7
Sabra05G0007500 Salix brachista HOM05D001944 ORTHO05D002405 5.9e-08 64.7 331 26.3
Sopen11g028320 Solanum pennellii HOM05D001944 ORTHO05D002405 5.9e-08 64.7 172 31.4
CiPaw.14G085200 Carya illinoinensis HOM05D001944 ORTHO05D002405 7.7e-08 64.3 455 22.9
Solyc11g069610.3 Solanum lycopersicum HOM05D001944 ORTHO05D002405 7.7e-08 64.3 196 30.1
TAR633G2605 Trochodendron aralioides HOM05D001944 ORTHO05D002405 7.7e-08 64.3 89 40.4
FAN21G2742 Fragaria x ananassa HOM05D001944 ORTHO05D002405 1.0e-07 63.9 307 25.1
SGA_v2.0_scaffold116G32253 Striga asiatica HOM05D001944 ORTHO05D002405 1.3e-07 63.5 270 27.4
Lj3g0013525 Lotus japonicus HOM05D001944 ORTHO05D002405 1.7e-07 63.2 299 27.4
MD11G1140000 Malus domestica HOM05D001944 ORTHO05D002405 1.7e-07 63.2 427 24.8
PSO339G1466 Papaver somniferum HOM05D001944 ORTHO05D002405 1.7e-07 63.2 342 25.7
AUR62022774 Chenopodium quinoa HOM05D001944 ORTHO05D002405 2.3e-07 62.8 276 28.6
Lj1A201T36 Lonicera japonica HOM05D001944 ORTHO05D002405 2.9e-07 62.4 130 33.1
COL.COLO4_18305 Corchorus olitorius HOM05D001944 ORTHO05D002405 5.0e-07 61.6 469 22.6
unitig_21.g20906 Utricularia gibba HOM05D001944 ORTHO05D002405 6.5e-07 61.2 161 31.7
CSS0007832 Camellia sinensis var. sinensis HOM05D001944 ORTHO05D002405 8.6e-07 60.8 115 32.2
Phvul.005G133500 Phaseolus vulgaris HOM05D001944 ORTHO05D002405 8.6e-07 60.8 344 24.4
Psat5g279720 Pisum sativum HOM05D001944 ORTHO05D002405 8.6e-07 60.8 168 30.4
Sed0024562 Sechium edule HOM05D001944 ORTHO05D002405 1.1e-06 60.5 212 28.8
Aqoxy1G01204 Aquilegia oxysepala HOM05D001944 ORTHO05D002405 1.5e-06 60.1 1269 21.0
AUR62029227 Chenopodium quinoa HOM05D001944 ORTHO05D002405 1.5e-06 60.1 272 26.8
Cpa.g.sc311.2 Carica papaya HOM05D001944 ORTHO05D002405 1.9e-06 59.7 430 24.9
CDE02G3605 Ceratophyllum demersum HOM05D001944 ORTHO05D002405 1.9e-06 59.7 185 27.6
ECA248G3660 Erigeron canadensis HOM05D001944 ORTHO05D002405 1.9e-06 59.7 103 35.0
Ah.01g003060 Amaranthus hybridus HOM05D001944 ORTHO05D002405 2.5e-06 59.3 335 25.4
Gorai.004G230500 Gossypium raimondii HOM05D001944 ORTHO05D002405 2.5e-06 59.3 282 23.4
ECA248G2414 Erigeron canadensis HOM05D001944 ORTHO05D002405 3.2e-06 58.9 349 25.8
PSO063G0478 Papaver somniferum HOM05D001944 ORTHO05D002405 3.2e-06 58.9 271 26.9
PGR102G2473 Punica granatum HOM05D001944 ORTHO05D002405 4.2e-06 58.5 215 27.4
FAN25G3826 Fragaria x ananassa HOM05D001944 ORTHO05D002405 5.5e-06 58.2 164 28.7
HanXRQChr14g0452741 Helianthus annuus HOM05D001944 ORTHO05D002405 5.5e-06 58.2 241 25.3
AL1G18410 Arabidopsis lyrata HOM05D001944 ORTHO05D002405 7.2e-06 57.8 271 24.7
RcHm_v2.0_Chr5g0058411 Rosa chinensis HOM05D001944 ORTHO05D002405 7.2e-06 57.8 264 26.1


User provided reference genes

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