Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G1214 Salvia bowleyana HOM05D007637 ORTHO05D009508 2.0e-65 252.3 126 100.0
SalBow3G3066 Salvia bowleyana HOM05D007637 ORTHO05D009508 2.0e-65 252.3 126 100.0
Oeu047428.1 Olea europaea HOM05D007637 ORTHO05D009508 8.7e-21 104.0 116 53.4
Dinv14862 Davidia involucrata HOM05D007637 ORTHO05D009508 5.6e-20 101.3 124 54.0
Gohir.A07G075400 Gossypium hirsutum HOM05D007637 ORTHO05D009508 2.1e-19 99.4 104 53.8
CSS0034381 Camellia sinensis var. sinensis HOM05D007637 ORTHO05D009508 2.8e-19 99.0 100 58.0
Thecc.04G125100 Theobroma cacao HOM05D007637 ORTHO05D009508 3.6e-19 98.6 131 51.1
Hma1.2p1_0283F.1_g113660 Hydrangea macrophylla HOM05D007637 ORTHO05D009508 6.2e-19 97.8 123 48.8
GSVIVG01030918001 Vitis vinifera HOM05D007637 ORTHO05D009508 1.4e-18 96.7 104 56.7
Gohir.D07G079900 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.8e-18 96.3 102 53.9
Gorai.001G084700 Gossypium raimondii HOM05D007637 ORTHO05D009508 1.8e-18 96.3 102 53.9
Oeu007437.1 Olea europaea HOM05D007637 ORTHO05D009508 2.4e-18 95.9 128 43.8
GSVIVG01030917001 Vitis vinifera HOM05D007637 ORTHO05D009508 3.1e-18 95.5 104 55.8
CiPaw.04G044900 Carya illinoinensis HOM05D007637 ORTHO05D009508 1.2e-17 93.6 108 51.9
Gohir.D07G182150 Gossypium hirsutum HOM05D007637 ORTHO05D009508 3.4e-17 92.0 127 44.9
Gorai.001G203000 Gossypium raimondii HOM05D007637 ORTHO05D009508 3.4e-17 92.0 127 44.9
Gohir.A07G175550 Gossypium hirsutum HOM05D007637 ORTHO05D009508 5.8e-17 91.3 127 44.1
TAR629G1467 Trochodendron aralioides HOM05D007637 ORTHO05D009508 5.8e-17 91.3 104 52.9
Solyc02g091193.1 Solanum lycopersicum HOM05D007637 ORTHO05D009508 1.3e-16 90.1 116 45.7
GSVIVG01030920001 Vitis vinifera HOM05D007637 ORTHO05D009508 2.2e-16 89.4 104 51.0
DCAR_010721 Daucus carota HOM05D007637 ORTHO05D009508 3.8e-16 88.6 122 45.9
Eucgr.J01537 Eucalyptus grandis HOM05D007637 ORTHO05D009508 3.8e-16 88.6 108 50.9
PGSC0003DMG400030637 Solanum tuberosum HOM05D007637 ORTHO05D009508 3.8e-16 88.6 120 45.0
Duzib133G0287 Durio zibethinus HOM05D007637 ORTHO05D009508 4.9e-16 88.2 126 47.6
Lj1g0007116 Lotus japonicus HOM05D007637 ORTHO05D009508 4.9e-16 88.2 111 45.0
Eucgr.J01538 Eucalyptus grandis HOM05D007637 ORTHO05D009508 8.4e-16 87.4 107 49.5
TAR374G0670 Trochodendron aralioides HOM05D007637 ORTHO05D009508 1.4e-15 86.7 104 49.0
PGR042G0465 Punica granatum HOM05D007637 ORTHO05D009508 2.4e-15 85.9 109 45.0
Dinv33980 Davidia involucrata HOM05D007637 ORTHO05D009508 3.2e-15 85.5 105 51.4
Haze_14202 Corylus avellana HOM05D007637 ORTHO05D009508 4.2e-15 85.1 88 55.7
Medtr7g082920 Medicago truncatula HOM05D007637 ORTHO05D009508 5.4e-15 84.7 104 50.0
Sabra04G0062800 Salix brachista HOM05D007637 ORTHO05D009508 5.4e-15 84.7 99 46.5
Sed0013286 Sechium edule HOM05D007637 ORTHO05D009508 7.1e-15 84.3 106 46.2
Actinidia36353 Actinidia chinensis HOM05D007637 ORTHO05D009508 9.3e-15 84.0 131 45.8
Manes.02G073000 Manihot esculenta HOM05D007637 ORTHO05D009508 2.1e-14 82.8 106 48.1
MD09G1259400 Malus domestica HOM05D007637 ORTHO05D009508 3.5e-14 82.0 128 43.0
Eucgr.J01536 Eucalyptus grandis HOM05D007637 ORTHO05D009508 7.9e-14 80.9 122 42.6
Ciclev10013623m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.0e-13 80.5 107 44.9
TPR.G28401 Trifolium pratense HOM05D007637 ORTHO05D009508 1.0e-13 80.5 106 45.3
Atru.chr1.1552 Acer truncatum HOM05D007637 ORTHO05D009508 1.3e-13 80.1 97 49.5
Cfa007872 Carpinus fangiana HOM05D007637 ORTHO05D009508 1.3e-13 80.1 101 51.5
Psat3g096920 Pisum sativum HOM05D007637 ORTHO05D009508 1.7e-13 79.7 100 48.0
Rhsim10G0078000 Rhododendron simsii HOM05D007637 ORTHO05D009508 3.0e-13 79.0 103 47.6
Prupe.3G151000 Prunus persica HOM05D007637 ORTHO05D009508 3.9e-13 78.6 132 39.4
COL.COLO4_38443 Corchorus olitorius HOM05D007637 ORTHO05D009508 5.1e-13 78.2 76 55.3
Nitab4.5_0005700g0020 Nicotiana tabacum HOM05D007637 ORTHO05D009508 6.6e-13 77.8 129 40.3
Manes.14G136000 Manihot esculenta HOM05D007637 ORTHO05D009508 1.1e-12 77.0 127 38.6
Gohir.D07G182500 Gossypium hirsutum HOM05D007637 ORTHO05D009508 1.5e-12 76.6 132 39.4
Potri.017G122100 Populus trichocarpa HOM05D007637 ORTHO05D009508 1.5e-12 76.6 106 45.3
Manes.02G073100 Manihot esculenta HOM05D007637 ORTHO05D009508 3.3e-12 75.5 127 36.2
Dinv16187 Davidia involucrata HOM05D007637 ORTHO05D009508 5.6e-12 74.7 105 45.7
Gorai.001G203100 Gossypium raimondii HOM05D007637 ORTHO05D009508 5.6e-12 74.7 104 44.2
TWI74G0234 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 5.6e-12 74.7 134 43.3
Manes.06G062300 Manihot esculenta HOM05D007637 ORTHO05D009508 7.4e-12 74.3 128 40.6
TAR622G1280 Trochodendron aralioides HOM05D007637 ORTHO05D009508 9.6e-12 73.9 84 52.4
Glyma.02G090700 Glycine max HOM05D007637 ORTHO05D009508 1.3e-11 73.6 118 44.1
Cpa.g.sc116.6 Carica papaya HOM05D007637 ORTHO05D009508 1.6e-11 73.2 114 42.1
Glyma.18G292400 Glycine max HOM05D007637 ORTHO05D009508 1.6e-11 73.2 110 45.5
Rhsim10G0078100 Rhododendron simsii HOM05D007637 ORTHO05D009508 1.1e-10 70.5 90 51.1
TWI79G1694 Tripterygium wilfordii HOM05D007637 ORTHO05D009508 1.1e-10 70.5 125 38.4
MD09G1259200 Malus domestica HOM05D007637 ORTHO05D009508 3.1e-10 68.9 127 38.6
Lsat_1_v5_gn_4_155320 Lactuca sativa HOM05D007637 ORTHO05D009508 6.9e-10 67.8 101 42.6
VMungo1383G3686 Vigna mungo HOM05D007637 ORTHO05D009508 9.0e-10 67.4 98 44.9
Eucgr.G02214 Eucalyptus grandis HOM05D007637 ORTHO05D009508 2.6e-09 65.9 94 39.4
Thecc.04G124800 Theobroma cacao HOM05D007637 ORTHO05D009508 2.6e-09 65.9 111 43.2
Glyma.20G124500 Glycine max HOM05D007637 ORTHO05D009508 4.5e-09 65.1 104 38.5
HanXRQChr09g0262421 Helianthus annuus HOM05D007637 ORTHO05D009508 4.5e-09 65.1 123 35.8
Actinidia15914 Actinidia chinensis HOM05D007637 ORTHO05D009508 5.8e-09 64.7 93 47.3
ATR0326G042 Amborella trichopoda HOM05D007637 ORTHO05D009508 5.8e-09 64.7 98 38.8
arahy.Tifrunner.gnm1.ann1.AC9JIC Arachis hypogaea HOM05D007637 ORTHO05D009508 5.8e-09 64.7 106 41.5
arahy.Tifrunner.gnm1.ann1.BY2X14 Arachis hypogaea HOM05D007637 ORTHO05D009508 5.8e-09 64.7 106 41.5
MBI10_g37696_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 7.6e-09 64.3 106 39.6
Phvul.008G009500 Phaseolus vulgaris HOM05D007637 ORTHO05D009508 1.3e-08 63.5 99 45.5
Ciclev10017462m.g Citrus clementina HOM05D007637 ORTHO05D009508 1.7e-08 63.2 129 32.6
Manes.01G114400 Manihot esculenta HOM05D007637 ORTHO05D009508 1.7e-08 63.2 104 36.5
Actinidia33410 Actinidia chinensis HOM05D007637 ORTHO05D009508 2.2e-08 62.8 93 36.6
HanXRQChr09g0262411 Helianthus annuus HOM05D007637 ORTHO05D009508 2.2e-08 62.8 101 38.6
Potri.010G115900 Populus trichocarpa HOM05D007637 ORTHO05D009508 2.2e-08 62.8 131 35.9
Glyma.10G266100 Glycine max HOM05D007637 ORTHO05D009508 2.9e-08 62.4 104 37.5
Sabra10G0085700 Salix brachista HOM05D004972 ORTHO05D006309 2.9e-08 62.4 103 38.8
Sabra10G0087400 Salix brachista HOM05D004972 ORTHO05D006309 2.9e-08 62.4 103 38.8
Nitab4.5_0002456g0080 Nicotiana tabacum HOM05D007637 ORTHO05D009508 4.9e-08 61.6 72 51.4
Rhsim09G0068300 Rhododendron simsii HOM05D007637 ORTHO05D009508 6.4e-08 61.2 121 35.5
CiPaw.05G246900 Carya illinoinensis HOM05D007637 ORTHO05D009508 8.4e-08 60.8 130 36.2
Lalb_Chr17g0336081 Lupinus albus HOM05D007637 ORTHO05D009508 1.1e-07 60.5 103 45.6
MBI16_g21183_MAGBIO Magnolia biondii HOM05D007637 ORTHO05D009508 1.9e-07 59.7 65 47.7
arahy.Tifrunner.gnm1.ann1.NE5PRN Arachis hypogaea HOM05D026189 ORTHO05D009508 5.5e-07 58.2 90 35.6
Actinidia31983 Actinidia chinensis HOM05D007637 ORTHO05D009508 1.2e-06 57.0 76 42.1
Nitab4.5_0002456g0100 Nicotiana tabacum HOM05D007637 ORTHO05D009508 1.2e-06 57.0 44 63.6
Lalb_Chr17g0336031 Lupinus albus HOM05D007637 ORTHO05D009508 1.6e-06 56.6 105 45.7
Nitab4.5_0002644g0060 Nicotiana tabacum HOM05D007637 ORTHO05D009508 6.0e-06 54.7 68 48.5


User provided reference genes

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