Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G3051 Salvia bowleyana HOM05D006663 ORTHO05D008269 6.3e-207 723.8 345 100.0
Migut.F00523 Erythranthe guttata HOM05D006663 ORTHO05D008269 1.7e-188 662.5 337 92.6
MSTRG.8846 Avicennia marina HOM05D006663 ORTHO05D008269 9.5e-187 656.8 337 91.7
SGA_v2.0_scaffold60G20812 Striga asiatica HOM05D006663 ORTHO05D008269 2.3e-185 652.1 337 90.5
Oeu042534.1 Olea europaea HOM05D006663 ORTHO05D008269 2.2e-183 645.6 337 89.9
Lj1C976T20 Lonicera japonica HOM05D006663 ORTHO05D008269 2.3e-180 635.6 338 86.4
Hma1.2p1_1580F.1_g291900 Hydrangea macrophylla HOM05D006663 ORTHO05D008269 1.6e-178 629.4 337 86.6
SalBow3G2644 Salvia bowleyana HOM05D006663 ORTHO05D008269 1.1e-177 626.7 299 99.3
GSVIVG01013975001 Vitis vinifera HOM05D006663 ORTHO05D008269 8.9e-177 623.6 337 85.5
Actinidia13608 Actinidia chinensis HOM05D006663 ORTHO05D008269 3.4e-176 621.7 337 85.5
CiPaw.07G185300 Carya illinoinensis HOM05D006663 ORTHO05D008269 4.4e-176 621.3 337 84.6
CSS0030206 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 5.8e-176 620.9 337 86.1
CSS0049195 Camellia sinensis var. sinensis HOM05D006663 ORTHO05D008269 5.8e-176 620.9 337 86.1
TAR636G2266 Trochodendron aralioides HOM05D006663 ORTHO05D008269 7.5e-176 620.5 337 84.0
Eucgr.A02922 Eucalyptus grandis HOM05D006663 ORTHO05D008269 9.8e-176 620.2 337 84.3
Atru.chr1.907 Acer truncatum HOM05D006663 ORTHO05D008269 8.3e-175 617.1 337 82.2
FAN10G3253 Fragaria x ananassa HOM05D006663 ORTHO05D008269 3.2e-174 615.1 342 83.0
Rhsim03G0161500 Rhododendron simsii HOM05D006663 ORTHO05D008269 7.1e-174 614.0 337 84.3
FAN06G1593 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.7e-173 612.1 337 84.0
FAN06G2606 Fragaria x ananassa HOM05D006663 ORTHO05D008269 2.7e-173 612.1 337 84.0
MD07G1249200 Malus domestica HOM05D006663 ORTHO05D008269 2.7e-173 612.1 337 84.3
RcHm_v2.0_Chr1g0373701 Rosa chinensis HOM05D006663 ORTHO05D008269 3.5e-173 611.7 337 83.7
COL.COLO4_37343 Corchorus olitorius HOM05D006663 ORTHO05D008269 4.6e-173 611.3 337 83.7
DCAR_020172 Daucus carota HOM05D006663 ORTHO05D008269 4.6e-173 611.3 338 82.5
TWI39G0071 Tripterygium wilfordii HOM05D006663 ORTHO05D008269 4.6e-173 611.3 337 84.3
Thecc.03G149200 Theobroma cacao HOM05D006663 ORTHO05D008269 7.8e-173 610.5 337 83.7
Haze_22195 Corylus avellana HOM05D006663 ORTHO05D008269 1.0e-172 610.1 337 83.1
FvH4_7g26970 Fragaria vesca HOM05D006663 ORTHO05D008269 2.3e-172 609.0 337 84.0
CANSAT56G2550 Cannabis sativa HOM05D006663 ORTHO05D008269 3.0e-172 608.6 337 82.8
Lsat_1_v5_gn_8_9600 Lactuca sativa HOM05D006663 ORTHO05D008269 3.9e-172 608.2 337 83.7
QL09p027994 Quercus lobata HOM05D006663 ORTHO05D008269 3.9e-172 608.2 353 80.2
MD01G1177500 Malus domestica HOM05D006663 ORTHO05D008269 6.6e-172 607.4 337 83.7
Nitab4.5_0007080g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.5e-171 605.5 340 83.8
Gorai.008G214300 Gossypium raimondii HOM05D006663 ORTHO05D008269 4.3e-171 604.7 337 83.4
Aqoxy7G00844 Aquilegia oxysepala HOM05D006663 ORTHO05D008269 5.6e-171 604.4 337 81.3
FAN03G0477 Fragaria x ananassa HOM05D006663 ORTHO05D008269 5.6e-171 604.4 342 82.2
VMungo0720G2856 Vigna mungo HOM05D006663 ORTHO05D008269 7.3e-171 604.0 337 83.1
Cc02_g04690 Coffea canephora HOM05D006663 ORTHO05D008269 1.2e-170 603.2 337 82.8
Gohir.A12G196700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.2e-170 603.2 337 82.8
HanXRQChr05g0138181 Helianthus annuus HOM05D006663 ORTHO05D008269 2.1e-170 602.4 337 83.1
Dinv06596 Davidia involucrata HOM05D006663 ORTHO05D008269 2.8e-170 602.1 321 87.2
Gohir.A09G080000 Gossypium hirsutum HOM05D006663 ORTHO05D008269 2.8e-170 602.1 337 82.8
Phvul.007G136100 Phaseolus vulgaris HOM05D006663 ORTHO05D008269 2.8e-170 602.1 337 83.1
Gohir.D09G034800 Gossypium hirsutum HOM05D006663 ORTHO05D008269 4.7e-170 601.3 337 83.1
Lj5g0020638 Lotus japonicus HOM05D006663 ORTHO05D008269 4.7e-170 601.3 337 83.1
Lalb_Chr02g0150831 Lupinus albus HOM05D006663 ORTHO05D008269 4.7e-170 601.3 337 83.1
Potri.003G151400 Populus trichocarpa HOM05D006663 ORTHO05D008269 4.7e-170 601.3 337 83.1
Cpa.g.sc13.257 Carica papaya HOM05D006663 ORTHO05D008269 6.2e-170 600.9 337 82.2
arahy.Tifrunner.gnm1.ann1.JS0B2B Arachis hypogaea HOM05D006663 ORTHO05D008269 1.1e-169 600.1 337 82.8
Ca_10369_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.8e-169 599.4 339 82.3
Ca_10419_v3 Cicer arietinum L. HOM05D006663 ORTHO05D008269 1.8e-169 599.4 339 82.3
ClCG01G004680 Citrullus lanatus HOM05D006663 ORTHO05D008269 2.3e-169 599.0 337 81.0
Glyma.20G195600 Glycine max HOM05D006663 ORTHO05D008269 2.3e-169 599.0 337 82.5
arahy.Tifrunner.gnm1.ann1.78X8E3 Arachis hypogaea HOM05D006663 ORTHO05D008269 5.2e-169 597.8 337 82.2
Manes.14G038500 Manihot esculenta HOM05D006663 ORTHO05D008269 6.8e-169 597.4 337 82.8
PSO732G0765 Papaver somniferum HOM05D006663 ORTHO05D008269 1.2e-168 596.7 337 80.4
Sc10g0004730 Simmondsia chinensis HOM05D006663 ORTHO05D008269 2.0e-168 595.9 337 80.7
BcaC06g32493 Brassica carinata HOM05D006663 ORTHO05D008269 3.4e-168 595.1 337 80.7
PSO675G3877 Papaver somniferum HOM05D006663 ORTHO05D008269 5.8e-168 594.3 337 80.1
ECA233G2092 Erigeron canadensis HOM05D006663 ORTHO05D008269 9.9e-168 593.6 333 81.4
A10p29330 Brassica napus HOM05D006663 ORTHO05D008269 1.3e-167 593.2 337 80.7
Medtr1g090310 Medicago truncatula HOM05D006663 ORTHO05D008269 1.3e-167 593.2 337 81.9
THA.LOC104801603 Tarenaya hassleriana HOM05D006663 ORTHO05D008269 2.2e-167 592.4 337 79.2
C09p69700 Brassica napus HOM05D006663 ORTHO05D008269 2.9e-167 592.0 337 80.4
BolC9t59713H Brassica oleracea HOM05D006663 ORTHO05D008269 2.9e-167 592.0 337 80.4
Sabra03G0109600 Salix brachista HOM05D006663 ORTHO05D008269 2.9e-167 592.0 358 77.9
Psat0s1505g0040 Pisum sativum HOM05D006663 ORTHO05D008269 6.4e-167 590.9 337 81.3
Sed0007931 Sechium edule HOM05D006663 ORTHO05D008269 6.4e-167 590.9 337 80.1
ATR0057G058 Amborella trichopoda HOM05D006663 ORTHO05D008269 4.1e-166 588.2 341 78.6
Sopen03g024320 Solanum pennellii HOM05D006663 ORTHO05D008269 5.4e-166 587.8 338 82.5
PGSC0003DMG400010747 Solanum tuberosum HOM05D006663 ORTHO05D008269 5.4e-166 587.8 338 82.5
vmacro06835 Vaccinium macrocarpon HOM05D006663 ORTHO05D008269 5.4e-166 587.8 339 80.5
CsaV3_5G004880 Cucumis sativus L. HOM05D006663 ORTHO05D008269 9.2e-166 587.0 337 78.9
CANSAT56G3894 Cannabis sativa HOM05D006663 ORTHO05D008269 1.2e-165 586.6 337 81.0
MELO3C005467.2 Cucumis melo HOM05D006663 ORTHO05D008269 2.7e-165 585.5 337 78.9
Potri.001G079100 Populus trichocarpa HOM05D006663 ORTHO05D008269 4.7e-162 574.7 337 80.1
Thhalv10013487m.g Eutrema salsugineum HOM05D006663 ORTHO05D008269 6.2e-162 574.3 337 78.6
HPP92_025692 Vanilla planifolia HOM05D006663 ORTHO05D008269 6.2e-162 574.3 341 76.5
AT5G07590 Arabidopsis thaliana HOM05D006663 ORTHO05D008269 1.1e-161 573.5 337 78.3
Carub.0006s0657 Capsella rubella HOM05D006663 ORTHO05D008269 1.4e-161 573.2 337 78.3
AL6G17900 Arabidopsis lyrata HOM05D006663 ORTHO05D008269 2.4e-161 572.4 337 78.0
CARHR205560 Cardamine hirsuta HOM05D006663 ORTHO05D008269 1.2e-160 570.1 337 78.0
Sabra01G0056700 Salix brachista HOM05D006663 ORTHO05D008269 3.4e-160 568.5 337 78.9
Prupe.2G272800 Prunus persica HOM05D006663 ORTHO05D008269 2.2e-159 565.8 299 87.0
Sp6g35280 Schrenkiella parvula HOM05D006663 ORTHO05D008269 6.4e-159 564.3 337 77.4
Gohir.D04G037700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.9e-158 562.8 296 86.8
Aa31LG3G18830 Aethionema arabicum HOM05D006663 ORTHO05D008269 3.5e-157 558.5 364 72.3
SEGI_30026 Sequoiadendron giganteum HOM05D006663 ORTHO05D008269 6.0e-157 557.8 341 76.0
Hund24931 Selenicereus undatus HOM05D006663 ORTHO05D008269 2.3e-156 555.8 337 74.5
Glyma.10G194400 Glycine max HOM05D006663 ORTHO05D008269 3.9e-156 555.1 297 85.5
TPR.G13385 Trifolium pratense HOM05D006663 ORTHO05D008269 3.9e-156 555.1 340 77.1
Os10g0563300 Oryza sativa ssp. japonica HOM05D006663 ORTHO05D008269 4.3e-155 551.6 341 73.9
EL10Ac7g15901 Beta vulgaris HOM05D006663 ORTHO05D008269 9.6e-155 550.4 337 75.1
Peaxi162Scf00271g00618 Petunia axillaris HOM05D006663 ORTHO05D008269 1.8e-153 546.2 340 77.1
Nitab4.5_0021979g0010 Nicotiana tabacum HOM05D006663 ORTHO05D008269 2.0e-152 542.7 297 85.9
Ciclev10004937m.g Citrus clementina HOM05D006663 ORTHO05D008269 7.6e-152 540.8 337 76.0
Nn1g00884 Nelumbo nucifera HOM05D006663 ORTHO05D008269 4.9e-151 538.1 337 75.7
Solyc03g093490.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.8e-148 529.6 313 80.5
AUR62009686 Chenopodium quinoa HOM05D006663 ORTHO05D008269 3.0e-148 528.9 337 72.4
SHI14080 Sapria himalayana HOM05D006663 ORTHO05D008269 2.2e-143 512.7 365 65.5
Zm00001eb325360 Zea mays HOM05D006663 ORTHO05D008269 1.2e-141 506.9 277 81.2
Pp3c13_8720 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.1e-137 493.8 337 66.8
Pp3c3_11450 Physcomitrium patens HOM05D006663 ORTHO05D008269 2.2e-135 486.1 337 65.9
SMO340G0268 Selaginella moellendorffii HOM05D006663 ORTHO05D008269 1.1e-134 483.8 341 64.8
AUR62001890 Chenopodium quinoa HOM05D006663 ORTHO05D008269 2.1e-133 479.6 337 67.4
AagrBONN_evm.TU.Sc2ySwM_228.1080 Anthoceros agrestis HOM05D006663 ORTHO05D008269 2.5e-131 472.6 337 61.7
Pp3c9_7850 Physcomitrium patens HOM05D006663 ORTHO05D008269 1.5e-128 463.4 342 62.9
Mapoly0178s0015 Marchantia polymorpha HOM05D006663 ORTHO05D008269 2.2e-127 459.5 348 60.9
CDE09G0338 Ceratophyllum demersum HOM05D006663 ORTHO05D008269 3.7e-122 442.2 271 75.6
PGR042G0458 Punica granatum HOM05D006663 ORTHO05D008269 5.9e-120 434.9 337 62.9
CBR_g49329 Chara braunii HOM05D006663 ORTHO05D008269 4.4e-115 418.7 339 56.3
PRCOL_00004773 Prasinoderma coloniale HOM05D006663 ORTHO05D008269 5.6e-78 295.4 355 41.4
Gohir.D12G199100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.7e-71 273.9 168 79.2
Cre13.g567150 Chlamydomonas reinhardtii HOM05D006663 ORTHO05D008269 2.3e-68 263.5 379 37.5
SHI00707 Sapria himalayana HOM05D006663 ORTHO05D008269 6.2e-53 212.2 195 55.4
Gohir.A03G137100 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.8e-52 208.8 110 85.5
Gohir.A07G166700 Gossypium hirsutum HOM05D006663 ORTHO05D008269 6.8e-52 208.8 110 85.5
Gohir.A09G003500 Gossypium hirsutum HOM05D006663 ORTHO05D008269 1.5e-51 207.6 110 84.5
Atru.chr4.2082 Acer truncatum HOM05D006663 ORTHO05D008269 4.3e-38 162.9 99 76.8
Solyc03g093500.3 Solanum lycopersicum HOM05D006663 ORTHO05D008269 1.1e-09 68.6 47 72.3
BcaC06g32421 Brassica carinata HOM05D006663 ORTHO05D008269 6.1e-08 62.8 40 67.5


User provided reference genes

Program Settings