Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 0.0e+00 1312.0 656 100.0
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 5.2e-85 319.7 714 36.7
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 3.8e-75 287.0 724 36.3
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 5.6e-71 273.1 399 48.9
Migut.B00223 Erythranthe guttata HOM05D007001 ORTHO05D005587 6.6e-64 249.6 688 33.4
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 3.5e-57 227.3 454 39.6
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 4.6e-57 226.9 766 30.2
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 1.1e-55 222.2 704 32.2
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 2.5e-55 221.1 438 36.8
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 4.8e-54 216.9 733 31.1
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 4.8e-54 216.9 428 40.4
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 8.1e-54 216.1 714 32.1
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 1.4e-53 215.3 758 29.3
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 1.4e-53 215.3 758 29.9
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 3.1e-53 214.2 389 40.1
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 9.0e-53 212.6 738 29.9
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 1.5e-52 211.8 435 38.6
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.5e-52 211.8 450 37.6
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 1.5e-52 211.8 444 36.7
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 1.5e-52 211.8 446 36.3
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 1.0e-51 209.1 444 36.5
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 1.1e-50 205.7 465 36.8
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 1.4e-50 205.3 697 31.7
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 5.5e-50 203.4 463 35.6
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 1.6e-49 201.8 710 28.6
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.0e-48 199.1 692 29.9
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 3.9e-48 197.2 425 38.1
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 3.9e-48 197.2 403 38.5
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 1.1e-47 195.7 425 36.2
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 5.7e-47 193.4 769 27.7
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 7.4e-47 193.0 423 38.8
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 4.8e-46 190.3 697 30.4
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 6.2e-46 189.9 693 29.6
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 5.3e-45 186.8 699 30.6
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 6.9e-45 186.4 674 29.5
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 6.9e-45 186.4 431 36.7
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 7.6e-44 183.0 428 36.4
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 2.2e-43 181.4 394 35.8
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 6.5e-43 179.9 418 35.4
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 8.4e-43 179.5 427 34.7
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 7.9e-41 172.9 425 35.8
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 1.0e-40 172.6 760 28.3
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 6.7e-40 169.9 707 27.0
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 8.7e-40 169.5 387 35.1
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 5.7e-39 166.8 566 29.2
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 9.7e-39 166.0 718 26.6
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 2.8e-38 164.5 405 34.1
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 3.7e-38 164.1 429 33.6
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 8.2e-38 162.9 417 32.1
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 3.1e-37 161.0 447 32.7
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 3.1e-37 161.0 442 33.0
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 9.0e-37 159.5 398 35.4
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 1.2e-36 159.1 401 35.4
VMungo1127G1486 Vigna mungo HOM05D007001 ORTHO05D005587 1.5e-36 158.7 400 33.8
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 3.4e-36 157.5 443 33.9
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 4.5e-36 157.1 398 33.7
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 4.5e-36 157.1 473 32.3
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 7.7e-36 156.4 399 34.8
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 1.9e-34 151.8 472 29.7
Nitab4.5_0008874g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 1.2e-33 149.1 377 32.9
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 2.1e-33 148.3 645 28.2
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 7.9e-33 146.4 408 32.4
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 7.9e-33 146.4 399 33.8
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 1.0e-32 146.0 397 32.7
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 1.4e-32 145.6 505 29.7
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 1.1e-31 142.5 466 31.5
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 7.4e-31 139.8 701 26.4
SGA_v2.0_scaffold125G33736 Striga asiatica HOM05D007001 ORTHO05D005587 3.7e-30 137.5 335 36.4
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 2.4e-29 134.8 390 31.3
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 2.0e-28 131.7 419 32.2
Nitab4.5_0007728g0020 Nicotiana tabacum HOM05D007001 ORTHO05D005587 2.6e-28 131.3 203 40.4
Dinv23502 Davidia involucrata HOM05D007001 ORTHO05D005587 3.8e-27 127.5 341 34.9
Oeu020745.1 Olea europaea HOM05D000342 ORTHO05D000217 8.5e-27 126.3 224 39.7
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 1.1e-26 125.9 428 31.5
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 1.4e-26 125.6 417 29.7
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 1.9e-26 125.2 407 32.4
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 5.5e-26 123.6 447 30.2
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 1.6e-25 122.1 448 30.4
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 1.6e-25 122.1 393 31.6
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 7.9e-25 119.8 395 29.4
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 1.4e-24 119.0 475 29.7
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 2.3e-24 118.2 666 25.4
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 3.0e-24 117.9 419 30.3
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 8.8e-24 116.3 351 31.3
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 1.1e-23 115.9 405 29.6
PGSC0003DMG400007729 Solanum tuberosum HOM05D007001 ORTHO05D005587 1.5e-23 115.5 231 37.2
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 2.0e-23 115.2 446 29.8
Lsat_1_v5_gn_9_108461 Lactuca sativa HOM05D007001 ORTHO05D005587 7.4e-23 113.2 684 26.3
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 9.1e-21 106.3 359 30.1
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 2.6e-20 104.8 359 30.1
DCAR_028976 Daucus carota HOM05D007001 ORTHO05D005587 4.5e-20 104.0 583 25.7
Sopen10g023370 Solanum pennellii HOM05D007001 ORTHO05D005587 7.7e-20 103.2 226 35.0
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 5.5e-18 97.1 214 35.0
Gohir.A12G029800 Gossypium hirsutum HOM05D007001 ORTHO05D005587 1.2e-17 95.9 171 40.4
unitig_699.g19881 Utricularia gibba HOM05D007001 ORTHO05D005587 1.6e-17 95.5 378 29.6
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 2.1e-17 95.1 347 28.5
CDE05G0774 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 6.1e-17 93.6 251 31.5
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 1.0e-16 92.8 387 27.4
Sc08g0000600 Simmondsia chinensis HOM05D007001 ORTHO05D005587 8.8e-16 89.7 283 32.9
Solyc10g052650.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 2.6e-15 88.2 84 53.6
Aqoxy6G01158 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 9.7e-15 86.3 429 28.2
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 1.7e-14 85.5 379 27.7
PSO170G6310 Papaver somniferum HOM05D007001 ORTHO05D005587 2.2e-14 85.1 372 28.0
PSO764G0276 Papaver somniferum HOM05D007001 ORTHO05D005587 2.4e-13 81.6 304 29.6
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 4.1e-13 80.9 338 28.7
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 7.0e-13 80.1 386 28.0
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 7.0e-13 80.1 386 28.0
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 4.5e-12 77.4 386 25.6
Nn1g04928 Nelumbo nucifera HOM05D007001 ORTHO05D005587 5.9e-12 77.0 153 35.3
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 1.7e-11 75.5 393 26.5
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 1.7e-11 75.5 278 30.9
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 1.7e-11 75.5 385 27.0
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 1.7e-11 75.5 278 30.9
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 2.9e-11 74.7 320 30.9
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 6.5e-11 73.6 307 29.0
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 1.5e-10 72.4 303 29.0
CDE06G0685 Ceratophyllum demersum HOM05D007001 ORTHO05D005587 1.5e-10 72.4 204 28.4
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 3.2e-10 71.2 384 27.6
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 4.2e-10 70.9 310 30.0
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 1.2e-09 69.3 376 25.0
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 1.2e-09 69.3 376 25.0
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 1.2e-09 69.3 376 25.0
CARHR106580 Cardamine hirsuta HOM05D008776 ORTHO05D005587 8.8e-08 63.2 200 28.5
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 1.5e-07 62.4 308 27.9


User provided reference genes

Program Settings