Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2496 Salvia bowleyana HOM05D005581 ORTHO05D006792 2.4e-101 372.1 180 100.0
Lsat_1_v5_gn_0_16520 Lactuca sativa HOM05D005581 ORTHO05D006792 2.3e-30 136.3 166 42.8
MSTRG.23979 Avicennia marina HOM05D005581 ORTHO05D006792 2.9e-30 136.0 169 42.6
DCAR_003657 Daucus carota HOM05D005581 ORTHO05D006792 2.9e-30 136.0 174 43.7
Peaxi162Scf00129g00828 Petunia axillaris HOM05D000793 ORTHO05D000783 3.8e-30 135.6 169 42.6
Nitab4.5_0007185g0080 Nicotiana tabacum HOM05D005581 ORTHO05D006792 5.0e-30 135.2 169 42.6
Hma1.2p1_1975F.1_g309690 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 6.5e-30 134.8 178 41.6
SalBow1G8695 Salvia bowleyana HOM05D005581 ORTHO05D006792 6.5e-30 134.8 170 42.4
Nitab4.5_0004905g0030 Nicotiana tabacum HOM05D000793 ORTHO05D006792 8.6e-30 134.4 169 42.6
ECA240G2828 Erigeron canadensis HOM05D005581 ORTHO05D006792 1.1e-29 134.0 166 43.4
Gohir.A07G217500 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.1e-29 134.0 168 42.9
Gorai.012G059200 Gossypium raimondii HOM05D005581 ORTHO05D006792 1.1e-29 134.0 167 42.5
PGSC0003DMG400001392 Solanum tuberosum HOM05D005581 ORTHO05D006792 1.9e-29 133.3 169 42.0
Dinv33676 Davidia involucrata HOM05D005581 ORTHO05D006792 2.5e-29 132.9 169 42.0
Migut.N00270 Erythranthe guttata HOM05D005581 ORTHO05D006792 2.5e-29 132.9 165 44.2
Gohir.A05G361700 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.5e-29 132.9 167 41.9
Gohir.D07G224600 Gossypium hirsutum HOM05D005581 ORTHO05D006792 2.5e-29 132.9 168 42.9
Gorai.001G259000 Gossypium raimondii HOM05D005581 ORTHO05D006792 2.5e-29 132.9 168 42.9
Manes.15G178800 Manihot esculenta HOM05D005581 ORTHO05D006792 2.5e-29 132.9 167 43.1
Duzib147G0516 Durio zibethinus HOM05D005581 ORTHO05D006792 3.2e-29 132.5 168 41.7
COL.COLO4_06153 Corchorus olitorius HOM05D000793 ORTHO05D000783 4.2e-29 132.1 166 42.2
Migut.H00163 Erythranthe guttata HOM05D005581 ORTHO05D006792 4.2e-29 132.1 183 38.8
Oeu031508.1 Olea europaea HOM05D005581 ORTHO05D006792 4.2e-29 132.1 166 42.8
Solyc02g087250.4 Solanum lycopersicum HOM05D000793 ORTHO05D000783 4.2e-29 132.1 169 42.0
Sopen02g032000 Solanum pennellii HOM05D005581 ORTHO05D006792 4.2e-29 132.1 169 42.0
CAN.G206.63 Capsicum annuum HOM05D005581 ORTHO05D006792 7.2e-29 131.3 166 41.6
Actinidia06044 Actinidia chinensis HOM05D005581 ORTHO05D006792 9.5e-29 131.0 166 41.6
RhsimUnG0168100 Rhododendron simsii HOM05D005581 ORTHO05D006792 9.5e-29 131.0 169 40.8
Sc06g0002610 Simmondsia chinensis HOM05D005581 ORTHO05D006792 9.5e-29 131.0 167 43.1
CSS0034562 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.2e-28 130.6 169 40.2
CSS0041908 Camellia sinensis var. sinensis HOM05D005581 ORTHO05D006792 1.2e-28 130.6 169 40.2
Gohir.D04G052800 Gossypium hirsutum HOM05D005581 ORTHO05D006792 1.2e-28 130.6 167 40.7
Prupe.3G278300 Prunus persica HOM05D005581 ORTHO05D006792 1.2e-28 130.6 166 43.4
Thecc.04G002800 Theobroma cacao HOM05D005581 ORTHO05D006792 1.2e-28 130.6 168 41.7
MSTRG.21916 Avicennia marina HOM05D005581 ORTHO05D006792 1.6e-28 130.2 157 47.1
Actinidia36059 Actinidia chinensis HOM05D005581 ORTHO05D006792 2.1e-28 129.8 166 41.0
Oeu062376.1 Olea europaea HOM05D005581 ORTHO05D006792 2.1e-28 129.8 170 41.2
Duzib187G0556 Durio zibethinus HOM05D005581 ORTHO05D006792 2.8e-28 129.4 166 41.6
Lalb_Chr05g0228941 Lupinus albus HOM05D005581 ORTHO05D006792 2.8e-28 129.4 166 41.6
Aqoxy3G03110 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 4.7e-28 128.6 166 41.0
Sed0016453 Sechium edule HOM05D005581 ORTHO05D006792 6.1e-28 128.3 166 41.6
SGA_v2.0_scaffold135G34832 Striga asiatica HOM05D005581 ORTHO05D006792 6.1e-28 128.3 170 41.2
Cpa.g.sc14.80 Carica papaya HOM05D005581 ORTHO05D006792 1.0e-27 127.5 165 41.8
DCAR_011192 Daucus carota HOM05D005581 ORTHO05D006792 2.3e-27 126.3 195 39.0
FvH4_6g50030 Fragaria vesca HOM05D005581 ORTHO05D006792 2.3e-27 126.3 169 42.6
FAN05G2284 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.3e-27 126.3 169 42.6
FAN09G0871 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.3e-27 126.3 169 42.6
FAN14G0942 Fragaria x ananassa HOM05D005581 ORTHO05D006792 2.3e-27 126.3 169 42.6
Hund12510 Selenicereus undatus HOM05D005581 ORTHO05D006792 2.3e-27 126.3 166 42.2
Phvul.003G125600 Phaseolus vulgaris HOM05D005581 ORTHO05D006792 4.0e-27 125.6 166 42.2
Psat3g165640 Pisum sativum HOM05D005581 ORTHO05D006792 4.0e-27 125.6 168 39.3
Hma1.2p1_0375F.1_g139010 Hydrangea macrophylla HOM05D005581 ORTHO05D006792 5.2e-27 125.2 169 38.5
Potri.001G470300 Populus trichocarpa HOM05D005581 ORTHO05D006792 5.2e-27 125.2 166 41.6
ATR0624G029 Amborella trichopoda HOM05D005581 ORTHO05D006792 6.8e-27 124.8 166 39.8
CsaV3_5G037490 Cucumis sativus L. HOM05D005581 ORTHO05D006792 8.8e-27 124.4 166 41.0
Lj2g0006948 Lotus japonicus HOM05D005581 ORTHO05D006792 8.8e-27 124.4 166 39.8
GSVIVG01032543001 Vitis vinifera HOM05D005581 ORTHO05D006792 8.8e-27 124.4 166 41.6
Lj2g0014392 Lotus japonicus HOM05D005581 ORTHO05D006792 1.2e-26 124.0 166 40.4
RcHm_v2.0_Chr2g0170291 Rosa chinensis HOM05D005581 ORTHO05D006792 1.2e-26 124.0 169 42.0
Glyma.13G116200 Glycine max HOM05D005581 ORTHO05D006792 1.5e-26 123.6 166 41.0
Hund20033 Selenicereus undatus HOM05D005581 ORTHO05D006792 1.5e-26 123.6 166 41.0
Atru.BG.224.p Acer truncatum HOM05D005581 ORTHO05D006792 2.0e-26 123.2 166 41.0
MELO3C033644.2 Cucumis melo HOM05D005581 ORTHO05D006792 2.6e-26 122.9 166 40.4
MD17G1040700 Malus domestica HOM05D005581 ORTHO05D006792 2.6e-26 122.9 166 42.2
TAR629G0716 Trochodendron aralioides HOM05D005581 ORTHO05D006792 2.6e-26 122.9 166 39.8
HPP92_026859 Vanilla planifolia HOM05D005581 ORTHO05D006792 2.6e-26 122.9 171 38.0
PGR083G1021 Punica granatum HOM05D005581 ORTHO05D006792 3.4e-26 122.5 166 39.8
QL02p078462 Quercus lobata HOM05D005581 ORTHO05D006792 4.4e-26 122.1 169 39.6
VMungo1215G0614 Vigna mungo HOM05D005581 ORTHO05D006792 4.4e-26 122.1 166 40.4
Eucgr.J02171 Eucalyptus grandis HOM05D005581 ORTHO05D006792 5.7e-26 121.7 169 40.8
Ciclev10016724m.g Citrus clementina HOM05D005581 ORTHO05D006792 7.5e-26 121.3 169 38.5
Cfa007475 Carpinus fangiana HOM05D005581 ORTHO05D006792 9.8e-26 120.9 166 39.2
TWI12G0742 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 1.3e-25 120.6 166 40.4
Carub.0003s2629 Capsella rubella HOM05D005581 ORTHO05D006792 1.7e-25 120.2 169 40.8
Ciclev10012718m.g Citrus clementina HOM05D005581 ORTHO05D006792 1.7e-25 120.2 166 39.8
arahy.Tifrunner.gnm1.ann1.E9CGF1 Arachis hypogaea HOM05D005581 ORTHO05D006792 2.2e-25 119.8 166 39.2
TPR.G39154 Trifolium pratense HOM05D005581 ORTHO05D006792 2.2e-25 119.8 166 39.8
Zm00001eb279970 Zea mays HOM05D005581 ORTHO05D006792 2.2e-25 119.8 170 36.5
BcaB06g27424 Brassica carinata HOM05D005581 ORTHO05D006792 3.7e-25 119.0 166 41.0
CDE06G0044 Ceratophyllum demersum HOM05D005581 ORTHO05D006792 3.7e-25 119.0 168 38.7
PSO832G2358 Papaver somniferum HOM05D005581 ORTHO05D006792 3.7e-25 119.0 166 39.2
AL3G42310 Arabidopsis lyrata HOM05D005581 ORTHO05D006792 4.9e-25 118.6 169 40.8
AT2G04690 Arabidopsis thaliana HOM05D005581 ORTHO05D006792 4.9e-25 118.6 169 40.2
Medtr7g030020 Medicago truncatula HOM05D005581 ORTHO05D006792 6.3e-25 118.2 166 39.2
Medtr7g038730 Medicago truncatula HOM05D005581 ORTHO05D006792 6.3e-25 118.2 166 39.2
Sabra16G0319200 Salix brachista HOM05D005581 ORTHO05D006792 6.3e-25 118.2 166 41.0
Sp7g01930 Schrenkiella parvula HOM05D005581 ORTHO05D006792 6.3e-25 118.2 166 42.2
EL10Ac7g18001 Beta vulgaris HOM05D005581 ORTHO05D006792 8.3e-25 117.9 186 36.6
Ca_19611_v3 Cicer arietinum L. HOM05D005581 ORTHO05D006792 8.3e-25 117.9 168 39.3
Migut.H00162 Erythranthe guttata HOM05D005581 ORTHO05D006792 8.3e-25 117.9 138 42.8
Lalb_Chr21g0319231 Lupinus albus HOM05D005581 ORTHO05D006792 8.3e-25 117.9 169 37.3
BraA04t16955Z Brassica rapa HOM05D005581 ORTHO05D006792 1.1e-24 117.5 166 41.0
CARHR102620 Cardamine hirsuta HOM05D005581 ORTHO05D006792 1.1e-24 117.5 169 41.4
Thhalv10027934m.g Eutrema salsugineum HOM05D005581 ORTHO05D006792 1.1e-24 117.5 166 41.6
Lj7A408G12 Lonicera japonica HOM05D005581 ORTHO05D006792 1.1e-24 117.5 133 46.6
Mapoly0035s0056 Marchantia polymorpha HOM05D005581 ORTHO05D006792 1.4e-24 117.1 169 39.1
PSO591G0467 Papaver somniferum HOM05D005581 ORTHO05D006792 1.4e-24 117.1 166 38.6
PSO832G0275 Papaver somniferum HOM05D005581 ORTHO05D006792 1.4e-24 117.1 166 38.6
arahy.Tifrunner.gnm1.ann1.2M0NJC Arachis hypogaea HOM05D005581 ORTHO05D006792 1.8e-24 116.7 166 38.6
Migut.H00166 Erythranthe guttata HOM05D005581 ORTHO05D006792 1.8e-24 116.7 154 42.9
EL10Ac7g18000 Beta vulgaris HOM05D005581 ORTHO05D006792 2.4e-24 116.3 167 40.1
Os06g0238300 Oryza sativa ssp. japonica HOM05D005581 ORTHO05D006792 2.4e-24 116.3 174 35.6
C04p46650 Brassica napus HOM05D005581 ORTHO05D006792 3.1e-24 115.9 166 41.0
BolC4t26253H Brassica oleracea HOM05D005581 ORTHO05D006792 3.1e-24 115.9 166 41.0
PSO063G2781 Papaver somniferum HOM05D005581 ORTHO05D006792 4.1e-24 115.5 156 39.7
Aqoxy3G03108 Aquilegia oxysepala HOM05D005581 ORTHO05D006792 5.4e-24 115.2 156 41.7
CiPaw.04G022300 Carya illinoinensis HOM05D005581 ORTHO05D006792 5.4e-24 115.2 166 39.8
AUR62001208 Chenopodium quinoa HOM05D005581 ORTHO05D006792 5.4e-24 115.2 166 39.2
MBI15_g35865_MAGBIO Magnolia biondii HOM05D005581 ORTHO05D006792 5.4e-24 115.2 156 41.7
arahy.Tifrunner.gnm1.ann1.B679M5 Arachis hypogaea HOM05D005581 ORTHO05D006792 7.0e-24 114.8 166 38.6
A04p12950 Brassica napus HOM05D005581 ORTHO05D006792 7.0e-24 114.8 166 40.4
Nn3g17019 Nelumbo nucifera HOM05D005581 ORTHO05D006792 7.0e-24 114.8 168 36.9
arahy.Tifrunner.gnm1.ann1.UYM2HQ Arachis hypogaea HOM05D005581 ORTHO05D006792 9.2e-24 114.4 166 38.6
AUR62022121 Chenopodium quinoa HOM05D005581 ORTHO05D006792 1.2e-23 114.0 166 39.2
SEGI_16176 Sequoiadendron giganteum HOM05D005581 ORTHO05D006792 1.2e-23 114.0 166 36.7
SHI25585 Sapria himalayana HOM05D005581 ORTHO05D006792 1.6e-23 113.6 166 40.4
SMO356G0730 Selaginella moellendorffii HOM05D005581 ORTHO05D006792 2.0e-23 113.2 170 37.1
ClCG00G001710 Citrullus lanatus HOM05D005581 ORTHO05D006792 2.7e-23 112.8 182 36.8
ClCG09G018630 Citrullus lanatus HOM05D005581 ORTHO05D006792 2.7e-23 112.8 182 36.8
Pp3c1_40840 Physcomitrium patens HOM05D005581 ORTHO05D006792 7.8e-23 111.3 170 36.5
TWI12G0286 Tripterygium wilfordii HOM05D005581 ORTHO05D006792 1.0e-22 110.9 136 44.9
THA.LOC104823921 Tarenaya hassleriana HOM05D005581 ORTHO05D006792 6.6e-22 108.2 169 40.8
Cc07_g02660 Coffea canephora HOM05D005581 ORTHO05D006792 1.1e-21 107.5 127 44.9
vmacro05787 Vaccinium macrocarpon HOM05D005581 ORTHO05D006792 4.3e-21 105.5 144 39.6
Atru.chr8.2410 Acer truncatum HOM05D005581 ORTHO05D006792 1.2e-20 104.0 126 42.9
PRCOL_00005184 Prasinoderma coloniale HOM05D005581 ORTHO05D006792 1.2e-20 104.0 183 36.1
AagrBONN_evm.TU.Sc2ySwM_368.1768 Anthoceros agrestis HOM05D005581 ORTHO05D006792 2.8e-20 102.8 169 34.9
CBR_g36833 Chara braunii HOM05D005581 ORTHO05D006792 1.0e-19 100.9 171 35.7
Psat3g011960 Pisum sativum HOM05D005581 ORTHO05D006792 5.2e-19 98.6 126 39.7
Aa31LG9G1540 Aethionema arabicum HOM05D005581 ORTHO05D006792 2.0e-15 86.7 127 41.7
Haze_14640 Corylus avellana HOM05D005581 ORTHO05D006792 5.9e-15 85.1 104 44.2
MD09G1040100 Malus domestica HOM05D005581 ORTHO05D006792 1.7e-14 83.6 162 34.0
Cre10.g440700 Chlamydomonas reinhardtii HOM05D005581 ORTHO05D006792 5.6e-13 78.6 192 28.1
Glyma.17G043600 Glycine max HOM05D005581 ORTHO05D006792 7.0e-08 61.6 74 39.2
HanXRQChr17g0548091 Helianthus annuus HOM05D005581 ORTHO05D006792 1.0e-06 57.8 64 43.8


User provided reference genes

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