Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2365 Salvia bowleyana HOM05D006482 ORTHO05D008149 1.9e-70 269.2 154 100.0
Migut.E00300 Erythranthe guttata HOM05D006482 ORTHO05D008149 2.4e-20 102.8 74 74.3
Oeu010737.1 Olea europaea HOM05D006482 ORTHO05D008149 1.1e-17 94.0 68 69.1
HanXRQChr07g0192381 Helianthus annuus HOM05D006482 ORTHO05D008149 7.1e-17 91.3 77 64.9
Solyc08g083200.3 Solanum lycopersicum HOM05D006482 ORTHO05D008149 1.2e-16 90.5 81 61.7
TAR629G1047 Trochodendron aralioides HOM05D006482 ORTHO05D008149 1.2e-16 90.5 74 70.3
Actinidia27284 Actinidia chinensis HOM05D000567 ORTHO05D000767 1.6e-16 90.1 75 66.7
Phvul.009G047100 Phaseolus vulgaris HOM05D006482 ORTHO05D008149 1.6e-16 90.1 74 67.6
TAR374G1512 Trochodendron aralioides HOM05D006482 ORTHO05D008149 1.6e-16 90.1 65 70.8
Potri.012G022900 Populus trichocarpa HOM05D006482 ORTHO05D008149 2.7e-16 89.4 74 67.6
Dinv18742 Davidia involucrata HOM05D006482 ORTHO05D008149 3.5e-16 89.0 64 70.3
ECA233G2670 Erigeron canadensis HOM05D006482 ORTHO05D008149 7.9e-16 87.8 64 65.6
Nn3g18841 Nelumbo nucifera HOM05D006482 ORTHO05D008149 1.0e-15 87.4 75 66.7
Lsat_1_v5_gn_6_10060 Lactuca sativa HOM05D006482 ORTHO05D008149 1.3e-15 87.0 74 64.9
Hund21041 Selenicereus undatus HOM05D006482 ORTHO05D008149 1.3e-15 87.0 63 71.4
PGSC0003DMG400012236 Solanum tuberosum HOM05D006482 ORTHO05D008149 1.7e-15 86.7 74 64.9
FvH4_7g32700 Fragaria vesca HOM05D006482 ORTHO05D008149 2.3e-15 86.3 75 64.0
FAN01G3112 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.3e-15 86.3 75 64.0
FAN03G2872 Fragaria x ananassa HOM05D006482 ORTHO05D008149 2.3e-15 86.3 75 64.0
RcHm_v2.0_Chr1g0382671 Rosa chinensis HOM05D006482 ORTHO05D008149 2.3e-15 86.3 74 64.9
TPR.G14847 Trifolium pratense HOM05D006482 ORTHO05D008149 2.3e-15 86.3 65 66.2
Ah.13g070630 Amaranthus hybridus HOM05D006482 ORTHO05D008149 3.0e-15 85.9 74 63.5
EL10Ac3g05199 Beta vulgaris HOM05D006482 ORTHO05D008149 3.0e-15 85.9 74 66.2
Lj1g0026941 Lotus japonicus HOM05D006482 ORTHO05D008149 3.0e-15 85.9 74 64.9
Nitab4.5_0008141g0050 Nicotiana tabacum HOM05D006482 ORTHO05D008149 3.0e-15 85.9 73 63.0
unitig_699.g19497 Utricularia gibba HOM05D006482 ORTHO05D008149 3.9e-15 85.5 71 63.4
Hma1.2p1_0456F.1_g156710 Hydrangea macrophylla HOM05D006482 ORTHO05D008149 6.6e-15 84.7 74 66.2
Potri.015G006500 Populus trichocarpa HOM05D006482 ORTHO05D008149 6.6e-15 84.7 74 64.9
Sopen08g031390 Solanum pennellii HOM05D006482 ORTHO05D008149 6.6e-15 84.7 74 63.5
Prupe.2G317400 Prunus persica HOM05D006482 ORTHO05D008149 8.7e-15 84.3 74 66.2
Sabra15G0004500 Salix brachista HOM05D006482 ORTHO05D008149 8.7e-15 84.3 74 64.9
Thecc.03G206900 Theobroma cacao HOM05D006482 ORTHO05D008149 8.7e-15 84.3 74 64.9
arahy.Tifrunner.gnm1.ann1.ZIU4UI Arachis hypogaea HOM05D006482 ORTHO05D008149 1.1e-14 84.0 74 60.8
Glyma.04G230700 Glycine max HOM05D006482 ORTHO05D008149 1.1e-14 84.0 74 62.2
Psat5g073480 Pisum sativum HOM05D006482 ORTHO05D008149 1.1e-14 84.0 74 62.2
vmacro06428 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 1.1e-14 84.0 74 60.8
arahy.Tifrunner.gnm1.ann1.CVH3M3 Arachis hypogaea HOM05D006482 ORTHO05D008149 1.5e-14 83.6 74 60.8
CSS0017170 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 1.5e-14 83.6 74 64.9
Nitab4.5_0002720g0020 Nicotiana tabacum HOM05D006482 ORTHO05D008149 1.5e-14 83.6 65 63.1
TWI39G0373 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 1.5e-14 83.6 74 62.2
Duzib205G0332 Durio zibethinus HOM05D006482 ORTHO05D008149 1.9e-14 83.2 74 64.9
Gorai.008G265700 Gossypium raimondii HOM05D006482 ORTHO05D008149 1.9e-14 83.2 65 67.7
Medtr3g092270 Medicago truncatula HOM05D006482 ORTHO05D008149 1.9e-14 83.2 65 64.6
PGR142G0199 Punica granatum HOM05D006482 ORTHO05D008149 1.9e-14 83.2 65 64.6
MD01G1227400 Malus domestica HOM05D006482 ORTHO05D008149 2.5e-14 82.8 74 62.2
PSO063G1999 Papaver somniferum HOM05D006482 ORTHO05D008149 2.5e-14 82.8 74 64.9
Sc19g0000660 Simmondsia chinensis HOM05D006482 ORTHO05D008149 2.5e-14 82.8 70 60.0
Ciclev10023193m.g Citrus clementina HOM05D006482 ORTHO05D008149 3.3e-14 82.4 74 63.5
Gohir.A08G103900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 5.6e-14 81.6 74 63.5
QL05p036199 Quercus lobata HOM05D006482 ORTHO05D008149 5.6e-14 81.6 73 63.0
GSVIVG01038627001 Vitis vinifera HOM05D006482 ORTHO05D008149 5.6e-14 81.6 74 63.5
CSS0001288 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 7.3e-14 81.3 74 64.9
TWI14G0741 Tripterygium wilfordii HOM05D006482 ORTHO05D008149 7.3e-14 81.3 69 60.9
COL.COLO4_14353 Corchorus olitorius HOM05D006482 ORTHO05D008149 9.6e-14 80.9 74 62.2
CANSAT21G0227 Cannabis sativa HOM05D006482 ORTHO05D008149 1.3e-13 80.5 68 64.7
Atru.chr12.2369 Acer truncatum HOM05D006482 ORTHO05D008149 1.6e-13 80.1 74 62.2
Gohir.D08G115300 Gossypium hirsutum HOM05D006482 ORTHO05D008149 1.6e-13 80.1 74 62.2
Gorai.004G124200 Gossypium raimondii HOM05D006482 ORTHO05D008149 1.6e-13 80.1 74 62.2
Rhsim03G0214200 Rhododendron simsii HOM05D006482 ORTHO05D008149 2.8e-13 79.3 74 58.1
CiPaw.05G203100 Carya illinoinensis HOM05D006482 ORTHO05D008149 3.6e-13 79.0 65 64.6
Manes.01G041500 Manihot esculenta HOM05D006482 ORTHO05D008149 4.8e-13 78.6 68 60.3
CDE09G1364 Ceratophyllum demersum HOM05D001294 ORTHO05D001178 6.2e-13 78.2 73 54.8
Lalb_Chr11g0067291 Lupinus albus HOM05D006482 ORTHO05D008149 6.2e-13 78.2 73 60.3
CSS0049934 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 8.1e-13 77.8 74 63.5
Dinv29224 Davidia involucrata HOM05D006482 ORTHO05D008149 8.1e-13 77.8 69 58.0
CARHR266810 Cardamine hirsuta HOM05D006482 ORTHO05D008149 1.4e-12 77.0 68 60.3
Sc13g0010170 Simmondsia chinensis HOM05D006482 ORTHO05D008149 1.8e-12 76.6 74 59.5
Peaxi162Scf00074g00224 Petunia axillaris HOM05D006482 ORTHO05D008149 2.4e-12 76.3 74 58.1
Aa31LG3G9780 Aethionema arabicum HOM05D006482 ORTHO05D008149 3.1e-12 75.9 74 59.5
Carub.0008s1398 Capsella rubella HOM05D006482 ORTHO05D008149 3.1e-12 75.9 74 59.5
Cc08_g16820 Coffea canephora HOM05D006482 ORTHO05D008149 3.1e-12 75.9 72 59.7
Eucgr.K00422 Eucalyptus grandis HOM05D006482 ORTHO05D008149 3.1e-12 75.9 74 59.5
Glyma.04G154600 Glycine max HOM05D006482 ORTHO05D008149 3.1e-12 75.9 70 61.4
Gohir.A12G246900 Gossypium hirsutum HOM05D006482 ORTHO05D008149 3.1e-12 75.9 65 61.5
THA.LOC109117152 Tarenaya hassleriana HOM05D006482 ORTHO05D008149 3.1e-12 75.9 68 63.2
AL8G28600 Arabidopsis lyrata HOM05D006482 ORTHO05D008149 4.0e-12 75.5 74 59.5
C03p17520 Brassica napus HOM05D006482 ORTHO05D008149 5.3e-12 75.1 65 60.0
BolC3t14165H Brassica oleracea HOM05D006482 ORTHO05D008149 5.3e-12 75.1 65 60.0
ClCG01G000130 Citrullus lanatus HOM05D006482 ORTHO05D008149 6.9e-12 74.7 74 54.1
Thhalv10015198m.g Eutrema salsugineum HOM05D006482 ORTHO05D008149 6.9e-12 74.7 74 58.1
Lalb_Chr23g0271851 Lupinus albus HOM05D006482 ORTHO05D008149 6.9e-12 74.7 74 58.1
AT5G53650 Arabidopsis thaliana HOM05D006482 ORTHO05D008149 9.0e-12 74.3 74 58.1
A03p15030 Brassica napus HOM05D006482 ORTHO05D008149 9.0e-12 74.3 64 60.9
BraA03t10797Z Brassica rapa HOM05D006482 ORTHO05D008149 9.0e-12 74.3 64 60.9
CsaV3_5G000030 Cucumis sativus L. HOM05D006482 ORTHO05D008149 9.0e-12 74.3 74 55.4
Sed0025475 Sechium edule HOM05D006482 ORTHO05D008149 9.0e-12 74.3 60 58.3
AUR62035606 Chenopodium quinoa HOM05D006482 ORTHO05D008149 1.5e-11 73.6 96 49.0
Sp6g15770 Schrenkiella parvula HOM05D006482 ORTHO05D008149 1.5e-11 73.6 74 56.8
MELO3C005924.2 Cucumis melo HOM05D006482 ORTHO05D008149 2.0e-11 73.2 74 54.1
Hund09702 Selenicereus undatus HOM05D006482 ORTHO05D008149 3.4e-11 72.4 74 58.1
BcaC01g06263 Brassica carinata HOM05D006482 ORTHO05D008149 4.5e-11 72.0 64 59.4
A02p10930 Brassica napus HOM05D006482 ORTHO05D008149 5.8e-11 71.6 65 56.9
Duzib068G1219 Durio zibethinus HOM05D006482 ORTHO05D008149 5.8e-11 71.6 80 52.5
MD07G1297700 Malus domestica HOM05D006482 ORTHO05D008149 5.8e-11 71.6 100 49.0
BcaB01g04252 Brassica carinata HOM05D006482 ORTHO05D008149 7.6e-11 71.2 64 57.8
BraA02t06158Z Brassica rapa HOM05D006482 ORTHO05D008149 7.6e-11 71.2 64 57.8
CiPaw.06G042200 Carya illinoinensis HOM05D006482 ORTHO05D008149 9.9e-11 70.9 63 58.7
BcaB05g22064 Brassica carinata HOM05D006482 ORTHO05D008149 1.7e-10 70.1 64 57.8
BcaC03g14399 Brassica carinata HOM05D006482 ORTHO05D008149 1.7e-10 70.1 64 56.2
C02p18140 Brassica napus HOM05D006482 ORTHO05D008149 1.7e-10 70.1 64 56.2
BolC2t07944H Brassica oleracea HOM05D006482 ORTHO05D008149 1.7e-10 70.1 64 56.2
Os05g0535700 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 1.7e-10 70.1 73 52.1
Glyma.06G134500 Glycine max HOM05D006482 ORTHO05D008149 2.9e-10 69.3 74 55.4
HPP92_020659 Vanilla planifolia HOM05D001695 ORTHO05D002735 3.8e-10 68.9 73 50.7
Sed0001965 Sechium edule HOM05D006482 ORTHO05D008149 4.2e-09 65.5 73 47.9
SEGI_31465 Sequoiadendron giganteum HOM05D006482 ORTHO05D008149 4.2e-09 65.5 73 46.6
Duzib084G1447 Durio zibethinus HOM05D006482 ORTHO05D008149 9.3e-09 64.3 60 56.7
Gohir.D12G247600 Gossypium hirsutum HOM05D006482 ORTHO05D008149 2.1e-08 63.2 65 58.5
Sabra12G0010900 Salix brachista HOM05D006482 ORTHO05D008149 2.7e-08 62.8 133 36.1
vmacro13845 Vaccinium macrocarpon HOM05D006482 ORTHO05D008149 7.9e-08 61.2 45 64.4
Haze_00279 Corylus avellana HOM05D006482 ORTHO05D008149 1.0e-07 60.8 41 73.2
QL09p007382 Quercus lobata HOM05D006482 ORTHO05D008149 1.0e-07 60.8 42 71.4
AUR62006020 Chenopodium quinoa HOM05D006482 ORTHO05D008149 1.3e-07 60.5 42 69.0
Rhsim07G0077300 Rhododendron simsii HOM05D006482 ORTHO05D008149 1.3e-07 60.5 42 69.0
ATR0579G147 Amborella trichopoda HOM05D006482 ORTHO05D008149 2.3e-07 59.7 42 64.3
FAN17G0467 Fragaria x ananassa HOM05D006482 ORTHO05D008149 3.0e-07 59.3 41 73.2
CSS0015195 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 3.9e-07 58.9 65 50.8
CSS0018303 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 5.1e-07 58.5 41 68.3
CDE11G0870 Ceratophyllum demersum HOM05D006482 ORTHO05D008149 1.1e-06 57.4 107 36.4
DCAR_006554 Daucus carota HOM05D006482 ORTHO05D008149 1.1e-06 57.4 48 58.3
CSS0007382 Camellia sinensis var. sinensis HOM05D006482 ORTHO05D008149 1.5e-06 57.0 65 49.2
Os01g0589100 Oryza sativa ssp. japonica HOM05D006482 ORTHO05D008149 2.5e-06 56.2 64 48.4
Zm00001eb294050 Zea mays HOM05D006482 ORTHO05D008149 2.5e-06 56.2 73 42.5


User provided reference genes

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