Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2298 Salvia bowleyana HOM05D007229 ORTHO05D009131 6.1e-94 347.4 171 100.0
SGA_v2.0_scaffold60G20901 Striga asiatica HOM05D007229 ORTHO05D009131 5.2e-61 238.0 178 71.3
MSTRG.27273 Avicennia marina HOM05D007229 ORTHO05D009131 6.8e-61 237.7 178 72.5
Oeu020108.1 Olea europaea HOM05D007229 ORTHO05D009131 1.5e-60 236.5 179 70.4
PGSC0003DMG400024310 Solanum tuberosum HOM05D007229 ORTHO05D009131 4.9e-59 231.5 185 68.6
Sopen06g015630 Solanum pennellii HOM05D007229 ORTHO05D009131 9.2e-58 227.3 138 84.8
TWI53G0143 Tripterygium wilfordii HOM05D007229 ORTHO05D009131 2.1e-57 226.1 145 77.2
PGR044G2361 Punica granatum HOM05D007229 ORTHO05D009131 3.5e-57 225.3 181 65.7
Thecc.10G183800 Theobroma cacao HOM05D007229 ORTHO05D009131 6.0e-57 224.6 175 69.1
Manes.10G004800 Manihot esculenta HOM05D007229 ORTHO05D009131 2.3e-56 222.6 162 71.6
COL.COLO4_19452 Corchorus olitorius HOM05D007229 ORTHO05D009131 8.6e-56 220.7 176 68.8
Haze_17350 Corylus avellana HOM05D000154 ORTHO05D000092 1.5e-55 219.9 173 68.2
Lj1g0022940 Lotus japonicus HOM05D007229 ORTHO05D009131 1.5e-55 219.9 169 69.2
Gohir.D04G011900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 1.9e-55 219.5 176 68.2
MELO3C020131.2 Cucumis melo HOM05D007229 ORTHO05D009131 2.5e-55 219.2 146 76.7
Glyma.04G221700 Glycine max HOM05D007229 ORTHO05D009131 2.5e-55 219.2 171 69.6
Gohir.A05G403900 Gossypium hirsutum HOM05D007229 ORTHO05D009131 2.5e-55 219.2 176 68.2
ECA233G6234 Erigeron canadensis HOM05D007229 ORTHO05D009131 3.3e-55 218.8 132 81.1
Glyma.06G143700 Glycine max HOM05D007229 ORTHO05D009131 3.3e-55 218.8 139 79.1
BcaB01g00004 Brassica carinata HOM05D007229 ORTHO05D009131 5.6e-55 218.0 138 77.5
BcaB01g00005 Brassica carinata HOM05D007229 ORTHO05D009131 5.6e-55 218.0 138 77.5
Hma1.2p1_2086F.1_g313730 Hydrangea macrophylla HOM05D007229 ORTHO05D009131 5.6e-55 218.0 175 68.0
Gorai.012G014100 Gossypium raimondii HOM05D007229 ORTHO05D009131 7.3e-55 217.6 176 67.6
Sabra19G0072100 Salix brachista HOM05D007229 ORTHO05D009131 9.5e-55 217.2 137 78.1
CsaV3_5G010830 Cucumis sativus L. HOM05D007229 ORTHO05D009131 1.6e-54 216.5 146 76.0
Migut.F00594 Erythranthe guttata HOM05D007229 ORTHO05D009131 1.6e-54 216.5 120 86.7
Lsat_1_v5_gn_8_13541 Lactuca sativa HOM05D007229 ORTHO05D009131 1.6e-54 216.5 152 74.3
arahy.Tifrunner.gnm1.ann1.B9ILCP Arachis hypogaea HOM05D007229 ORTHO05D009131 2.1e-54 216.1 170 66.5
Solyc06g050170.4 Solanum lycopersicum HOM05D000154 ORTHO05D000092 2.1e-54 216.1 124 85.5
GSVIVG01032702001 Vitis vinifera HOM05D007229 ORTHO05D009131 2.8e-54 215.7 141 79.4
FvH4_7g25840 Fragaria vesca HOM05D007229 ORTHO05D009131 3.6e-54 215.3 159 71.7
FAN06G3440 Fragaria x ananassa HOM05D007229 ORTHO05D009131 3.6e-54 215.3 159 71.7
Phvul.009G142501 Phaseolus vulgaris HOM05D007229 ORTHO05D009131 3.6e-54 215.3 169 68.0
Sp5g06210 Schrenkiella parvula HOM05D007229 ORTHO05D009131 3.6e-54 215.3 139 77.7
TAR369G0442 Trochodendron aralioides HOM05D007229 ORTHO05D009131 3.6e-54 215.3 150 74.0
arahy.Tifrunner.gnm1.ann1.I1HNZH Arachis hypogaea HOM05D007229 ORTHO05D009131 4.7e-54 214.9 170 65.9
Lj1A965T45 Lonicera japonica HOM05D007229 ORTHO05D009131 4.7e-54 214.9 150 73.3
Peaxi162Scf00739g00125 Petunia axillaris HOM05D000154 ORTHO05D000092 4.7e-54 214.9 135 81.5
RcHm_v2.0_Chr1g0372111 Rosa chinensis HOM05D007229 ORTHO05D009131 4.7e-54 214.9 168 68.5
Actinidia00993 Actinidia chinensis HOM05D007229 ORTHO05D009131 6.2e-54 214.5 139 76.3
Cc02_g05510 Coffea canephora HOM05D007229 ORTHO05D009131 8.1e-54 214.2 141 77.3
Dinv26059 Davidia involucrata HOM05D007229 ORTHO05D009131 8.1e-54 214.2 178 65.2
Duzib114G0482 Durio zibethinus HOM05D007229 ORTHO05D009131 8.1e-54 214.2 156 71.2
Manes.07G139500 Manihot esculenta HOM05D007229 ORTHO05D009131 8.1e-54 214.2 159 69.8
Medtr3g094080 Medicago truncatula HOM05D007229 ORTHO05D009131 8.1e-54 214.2 168 67.9
DCAR_019811 Daucus carota HOM05D007229 ORTHO05D009131 1.4e-53 213.4 124 83.1
MD07G1232800 Malus domestica HOM05D007229 ORTHO05D009131 1.4e-53 213.4 142 76.8
TPR.G16113 Trifolium pratense HOM05D007229 ORTHO05D009131 1.4e-53 213.4 166 67.5
Lalb_Chr11g0067841 Lupinus albus HOM05D007229 ORTHO05D009131 1.8e-53 213.0 165 68.5
Ciclev10033477m.g Citrus clementina HOM05D007229 ORTHO05D009131 2.3e-53 212.6 179 66.5
Prupe.2G263300 Prunus persica HOM05D007229 ORTHO05D009131 2.3e-53 212.6 144 78.5
QL08p064765 Quercus lobata HOM05D007229 ORTHO05D009131 2.3e-53 212.6 171 66.7
Rhsim09G0184500 Rhododendron simsii HOM05D007229 ORTHO05D009131 2.3e-53 212.6 139 77.0
Sed0026302 Sechium edule HOM05D007229 ORTHO05D009131 3.1e-53 212.2 121 86.0
Potri.019G056400 Populus trichocarpa HOM05D007229 ORTHO05D009131 4.0e-53 211.8 137 76.6
BcaC08g44777 Brassica carinata HOM05D007229 ORTHO05D009131 5.2e-53 211.5 139 76.3
A07p22880 Brassica napus HOM05D007229 ORTHO05D009131 5.2e-53 211.5 139 76.3
C06p23470 Brassica napus HOM05D007229 ORTHO05D009131 5.2e-53 211.5 139 76.3
BraA07t29954Z Brassica rapa HOM05D007229 ORTHO05D009131 5.2e-53 211.5 139 76.3
ClCG07G004950 Citrullus lanatus HOM05D007229 ORTHO05D009131 6.8e-53 211.1 148 74.3
BcaC07g39946 Brassica carinata HOM05D007229 ORTHO05D009131 8.9e-53 210.7 139 76.3
C08p31620 Brassica napus HOM05D007229 ORTHO05D009131 8.9e-53 210.7 139 76.3
BolC8t50783H Brassica oleracea HOM05D007229 ORTHO05D009131 8.9e-53 210.7 139 76.3
CARHR166450 Cardamine hirsuta HOM05D007229 ORTHO05D009131 8.9e-53 210.7 139 75.5
AT3G56290 Arabidopsis thaliana HOM05D007229 ORTHO05D009131 1.2e-52 210.3 138 76.1
CAN.G55.3 Capsicum annuum HOM05D007229 ORTHO05D009131 1.2e-52 210.3 121 83.5
THA.LOC104824356 Tarenaya hassleriana HOM05D007229 ORTHO05D009131 1.2e-52 210.3 120 85.0
BolC6t37520H Brassica oleracea HOM05D007229 ORTHO05D009131 1.5e-52 209.9 139 75.5
Carub.0005s2307 Capsella rubella HOM05D007229 ORTHO05D009131 1.5e-52 209.9 140 76.4
Thhalv10006268m.g Eutrema salsugineum HOM05D007229 ORTHO05D009131 1.5e-52 209.9 121 85.1
VMungo1309G1820 Vigna mungo HOM05D007229 ORTHO05D009131 1.5e-52 209.9 171 65.5
A09p49260 Brassica napus HOM05D007229 ORTHO05D009131 2.6e-52 209.1 136 76.5
BraA09t40379Z Brassica rapa HOM05D007229 ORTHO05D009131 2.6e-52 209.1 136 76.5
Psat5g069080 Pisum sativum HOM05D007229 ORTHO05D009131 2.6e-52 209.1 172 65.1
Hund13463 Selenicereus undatus HOM05D007229 ORTHO05D009131 2.6e-52 209.1 162 66.0
CiPaw.01G306000 Carya illinoinensis HOM05D007229 ORTHO05D009131 3.4e-52 208.8 155 69.0
PSO339G1638 Papaver somniferum HOM05D007229 ORTHO05D009131 1.7e-51 206.5 141 76.6
Cpa.g.sc19.82 Carica papaya HOM05D007229 ORTHO05D009131 2.9e-51 205.7 124 81.5
HanXRQChr08g0222581 Helianthus annuus HOM05D007229 ORTHO05D009131 3.7e-51 205.3 122 81.1
MBI15_g35108_MAGBIO Magnolia biondii HOM05D007229 ORTHO05D009131 4.9e-51 204.9 152 73.0
PSO384G2154 Papaver somniferum HOM05D007229 ORTHO05D009131 4.9e-51 204.9 141 76.6
Sc14g0005610 Simmondsia chinensis HOM05D007229 ORTHO05D009131 8.3e-51 204.1 176 63.6
Duzib106G0259 Durio zibethinus HOM05D007229 ORTHO05D009131 1.4e-50 203.4 144 71.5
CDE12G0285 Ceratophyllum demersum HOM05D007229 ORTHO05D009131 1.9e-50 203.0 139 73.4
Aa31LG10G11190 Aethionema arabicum HOM05D007229 ORTHO05D009131 3.2e-50 202.2 122 81.1
AL5G37620 Arabidopsis lyrata HOM05D007229 ORTHO05D009131 1.2e-49 200.3 120 81.7
Os01g0823600 Oryza sativa ssp. japonica HOM05D007229 ORTHO05D009131 2.1e-49 199.5 142 71.1
HPP92_017919 Vanilla planifolia HOM05D007229 ORTHO05D009131 3.0e-48 195.7 170 58.8
AUR62012362 Chenopodium quinoa HOM05D007229 ORTHO05D009131 3.9e-48 195.3 182 58.8
CSS0032880 Camellia sinensis var. sinensis HOM05D007229 ORTHO05D009131 6.6e-48 194.5 175 61.7
BcaB02g07659 Brassica carinata HOM05D007229 ORTHO05D009131 4.3e-47 191.8 144 68.8
Aqoxy2G00722 Aquilegia oxysepala HOM05D007229 ORTHO05D009131 5.6e-47 191.4 132 74.2
EL10Ac2g04250 Beta vulgaris HOM05D007229 ORTHO05D009131 2.1e-46 189.5 170 61.2
SEGI_31216 Sequoiadendron giganteum HOM05D007229 ORTHO05D009131 1.8e-45 186.4 159 61.0
AUR62031491 Chenopodium quinoa HOM05D000154 ORTHO05D000092 3.1e-45 185.7 114 77.2
Mapoly0032s0114 Marchantia polymorpha HOM05D007229 ORTHO05D009131 1.3e-43 180.3 120 70.8
ATR0681G125 Amborella trichopoda HOM05D007229 ORTHO05D009131 2.2e-43 179.5 146 65.8
Pp3c19_14460 Physcomitrium patens HOM05D007229 ORTHO05D009131 7.1e-42 174.5 121 70.2
SMO230G0076 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 6.6e-40 167.9 123 67.5
Nitab4.5_0000109g0540 Nicotiana tabacum HOM05D000154 ORTHO05D009131 1.1e-39 167.2 136 66.2
Nitab4.5_0003695g0030 Nicotiana tabacum HOM05D007229 ORTHO05D009131 3.3e-39 165.6 136 66.2
vmacro09972 Vaccinium macrocarpon HOM05D007229 ORTHO05D009131 3.6e-38 162.2 139 63.3
SMO230G0102 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.2e-33 147.1 100 72.0
SMO230G0113 Selaginella moellendorffii HOM05D007229 ORTHO05D009131 1.2e-33 147.1 100 72.0
Sed0009884 Sechium edule HOM05D007229 ORTHO05D009131 2.4e-29 132.9 124 59.7
Nn2g10342 Nelumbo nucifera HOM05D000154 ORTHO05D000092 1.3e-24 117.1 67 79.1
SabraUnG0004000 Salix brachista HOM05D007229 ORTHO05D009131 6.7e-24 114.8 110 62.7
Ah.10g035980 Amaranthus hybridus HOM05D007229 ORTHO05D009131 3.3e-23 112.5 138 52.2
MD01G1165900 Malus domestica HOM05D000154 ORTHO05D000092 2.8e-22 109.4 58 84.5
AagrBONN_evm.TU.Sc2ySwM_344.3614 Anthoceros agrestis HOM05D007229 ORTHO05D009131 1.3e-19 100.5 103 57.3
Zm00001eb149430 Zea mays HOM05D007229 ORTHO05D009131 1.7e-19 100.1 105 56.2
FAN01G1364 Fragaria x ananassa HOM05D007229 ORTHO05D009131 1.0e-16 90.9 88 61.4
Eucgr.J00129 Eucalyptus grandis HOM05D007229 ORTHO05D009131 3.7e-06 55.8 90 43.3
unitig_90.g27575 Utricularia gibba HOM05D007229 ORTHO05D009131 6.3e-06 55.1 58 53.4


User provided reference genes

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