Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2244 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.2e-53 213.0 111 100.0
SalBow3G3619 Salvia bowleyana HOM05D005755 ORTHO05D007006 1.2e-53 213.0 111 100.0
SalBow1G5334 Salvia bowleyana HOM05D005755 ORTHO05D007006 3.4e-53 211.5 111 99.1
SalBow1G7067 Salvia bowleyana HOM05D005755 ORTHO05D007006 3.4e-53 211.5 111 99.1
SGA_v2.0_scaffold122G33246 Striga asiatica HOM05D005940 ORTHO05D007027 1.9e-40 169.1 109 77.1
MSTRG.8164 Avicennia marina HOM05D005755 ORTHO05D007006 2.1e-39 165.6 109 74.3
Oeu017232.1 Olea europaea HOM05D005755 ORTHO05D007006 1.1e-38 163.3 111 73.0
Oeu057236.1 Olea europaea HOM05D005755 ORTHO05D007006 9.0e-38 160.2 111 70.3
Migut.F01798 Erythranthe guttata HOM05D005755 ORTHO05D007006 1.1e-35 153.3 100 77.0
SGA_v2.0_scaffold71G24037 Striga asiatica HOM05D005755 ORTHO05D007006 2.1e-34 149.1 112 67.9
vmacro04890 Vaccinium macrocarpon HOM05D005755 ORTHO05D007006 2.1e-31 139.0 113 66.4
Aa31LG7G12880 Aethionema arabicum HOM05D005755 ORTHO05D007006 1.4e-30 136.3 106 67.9
Dinv04676 Davidia involucrata HOM05D005755 ORTHO05D007006 1.8e-30 136.0 110 65.5
Peaxi162Scf00111g00718 Petunia axillaris HOM05D005755 ORTHO05D007006 3.1e-30 135.2 108 64.8
DCAR_015273 Daucus carota HOM05D005755 ORTHO05D007006 4.0e-30 134.8 98 68.4
Peaxi162Scf00373g00210 Petunia axillaris HOM05D005755 ORTHO05D007006 4.0e-30 134.8 99 69.7
BcaB08g35550 Brassica carinata HOM05D005755 ORTHO05D007006 5.3e-30 134.4 94 71.3
Cc00_g19060 Coffea canephora HOM05D005755 ORTHO05D007006 5.3e-30 134.4 106 67.9
Actinidia38859 Actinidia chinensis HOM05D005755 ORTHO05D007006 6.9e-30 134.0 109 68.8
Sc05g0001890 Simmondsia chinensis HOM05D005755 ORTHO05D007006 6.9e-30 134.0 98 67.3
EL10Ac7g15953 Beta vulgaris HOM05D005755 ORTHO05D007006 9.0e-30 133.7 99 66.7
Dinv11808 Davidia involucrata HOM05D005755 ORTHO05D007006 9.0e-30 133.7 98 68.4
Atru.chr12.636 Acer truncatum HOM05D005755 ORTHO05D007006 1.2e-29 133.3 115 60.9
Thhalv10015092m.g Eutrema salsugineum HOM05D005755 ORTHO05D007006 1.2e-29 133.3 98 68.4
EL10Ac3g06003 Beta vulgaris HOM05D005755 ORTHO05D007006 1.5e-29 132.9 99 66.7
EL10Ac7g17935 Beta vulgaris HOM05D005755 ORTHO05D007006 1.5e-29 132.9 99 66.7
Sopen04g020610 Solanum pennellii HOM05D005755 ORTHO05D007006 1.5e-29 132.9 106 64.2
Hma1.2p1_0157F.1_g068960 Hydrangea macrophylla HOM05D005755 ORTHO05D007006 2.0e-29 132.5 98 66.3
Thecc.10G068000 Theobroma cacao HOM05D005755 ORTHO05D007006 2.0e-29 132.5 103 64.1
Cpa.g.sc53.20 Carica papaya HOM05D005755 ORTHO05D007006 2.6e-29 132.1 98 69.4
EL10Ac6g13227 Beta vulgaris HOM05D005755 ORTHO05D007006 3.4e-29 131.7 104 64.4
CAN.G79.77 Capsicum annuum HOM05D005755 ORTHO05D007006 3.4e-29 131.7 103 68.9
Nn5g30302 Nelumbo nucifera HOM05D005755 ORTHO05D007006 3.4e-29 131.7 102 65.7
THA.LOC104799357 Tarenaya hassleriana HOM05D005755 ORTHO05D007006 3.4e-29 131.7 98 65.3
Ciclev10033129m.g Citrus clementina HOM05D005755 ORTHO05D007006 5.8e-29 131.0 102 63.7
TWI15G0398 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 5.8e-29 131.0 100 66.0
CANSAT11G0923 Cannabis sativa HOM05D005755 ORTHO05D007006 7.6e-29 130.6 97 69.1
ECA238G0308 Erigeron canadensis HOM05D005755 ORTHO05D007006 7.6e-29 130.6 104 67.3
Solyc04g049970.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 7.6e-29 130.6 103 64.1
Duzib114G0063 Durio zibethinus HOM05D005755 ORTHO05D007006 9.9e-29 130.2 103 64.1
CSS0044562 Camellia sinensis var. sinensis HOM05D005755 ORTHO05D007006 1.3e-28 129.8 115 64.3
AUR62037483 Chenopodium quinoa HOM05D005755 ORTHO05D007006 1.3e-28 129.8 99 65.7
Solyc07g065720.4 Solanum lycopersicum HOM05D005755 ORTHO05D007006 1.3e-28 129.8 105 63.8
BraA10t43055Z Brassica rapa HOM05D005755 ORTHO05D007006 1.7e-28 129.4 94 70.2
Ca_19066_v3 Cicer arietinum L. HOM05D005755 ORTHO05D007006 1.7e-28 129.4 100 68.0
CARHR264900 Cardamine hirsuta HOM05D005755 ORTHO05D007006 2.2e-28 129.0 99 65.7
Manes.10G042600 Manihot esculenta HOM05D005755 ORTHO05D007006 2.2e-28 129.0 104 62.5
Sp6g14210 Schrenkiella parvula HOM05D005755 ORTHO05D007006 2.2e-28 129.0 99 64.6
Sopen07g033930 Solanum pennellii HOM05D005755 ORTHO05D007006 2.2e-28 129.0 106 62.3
PGSC0003DMG400022164 Solanum tuberosum HOM05D005755 ORTHO05D007006 2.2e-28 129.0 106 60.4
BcaC03g14561 Brassica carinata HOM05D005755 ORTHO05D007006 2.9e-28 128.6 107 63.6
C02p20090 Brassica napus HOM05D005755 ORTHO05D007006 2.9e-28 128.6 107 63.6
RcHm_v2.0_Chr1g0364121 Rosa chinensis HOM05D005755 ORTHO05D007006 2.9e-28 128.6 98 67.3
Hund18453 Selenicereus undatus HOM05D005755 ORTHO05D007006 2.9e-28 128.6 102 63.7
A10p09750 Brassica napus HOM05D005755 ORTHO05D007006 3.8e-28 128.3 94 69.1
BolC2t08139H Brassica oleracea HOM05D005755 ORTHO05D007006 3.8e-28 128.3 107 63.6
BraA02t06267Z Brassica rapa HOM05D005755 ORTHO05D007006 3.8e-28 128.3 107 64.5
TAR381G1573 Trochodendron aralioides HOM05D005755 ORTHO05D007006 3.8e-28 128.3 102 62.7
Duzib106G1131 Durio zibethinus HOM05D005755 ORTHO05D007006 4.9e-28 127.9 103 63.1
Gohir.A01G133200 Gossypium hirsutum HOM05D005755 ORTHO05D007006 4.9e-28 127.9 98 64.3
Ah.04g160050 Amaranthus hybridus HOM05D005755 ORTHO05D007006 6.4e-28 127.5 100 66.0
Nitab4.5_0001721g0080 Nicotiana tabacum HOM05D005755 ORTHO05D007006 6.4e-28 127.5 107 61.7
AUR62004768 Chenopodium quinoa HOM05D005755 ORTHO05D007006 8.4e-28 127.1 99 63.6
Gorai.002G143500 Gossypium raimondii HOM05D005755 ORTHO05D007006 8.4e-28 127.1 98 64.3
Nitab4.5_0000061g0170 Nicotiana tabacum HOM05D005755 ORTHO05D007006 8.4e-28 127.1 103 63.1
AL8G26290 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 1.1e-27 126.7 100 65.0
Prupe.2G218600 Prunus persica HOM05D005755 ORTHO05D007006 1.4e-27 126.3 98 66.3
TPR.G12499 Trifolium pratense HOM05D005755 ORTHO05D007006 1.4e-27 126.3 100 63.0
AT5G51960 Arabidopsis thaliana HOM05D005755 ORTHO05D007006 1.9e-27 125.9 97 66.0
BcaC04g20616 Brassica carinata HOM05D005755 ORTHO05D007006 1.9e-27 125.9 94 68.1
C09p41470 Brassica napus HOM05D005755 ORTHO05D007006 1.9e-27 125.9 94 68.1
BolC9t57024H Brassica oleracea HOM05D005755 ORTHO05D007006 1.9e-27 125.9 94 68.1
Phvul.002G244400 Phaseolus vulgaris HOM05D005755 ORTHO05D007006 1.9e-27 125.9 98 63.3
Rhsim09G0154200 Rhododendron simsii HOM05D001639 ORTHO05D004140 1.9e-27 125.9 138 55.1
Carub.0008s1205 Capsella rubella HOM05D005755 ORTHO05D007006 2.4e-27 125.6 100 63.0
FAN10G3796 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.4e-27 125.6 99 66.7
Glyma.05G164400 Glycine max HOM05D005755 ORTHO05D007006 2.4e-27 125.6 98 64.3
GSVIVG01016339001 Vitis vinifera HOM05D005755 ORTHO05D007006 2.4e-27 125.6 102 63.7
CsaV3_3G030820 Cucumis sativus L. HOM05D005755 ORTHO05D007006 3.2e-27 125.2 112 60.7
Glyma.08G121800 Glycine max HOM05D005755 ORTHO05D007006 3.2e-27 125.2 98 64.3
Lsat_1_v5_gn_2_46180 Lactuca sativa HOM05D005755 ORTHO05D007006 3.2e-27 125.2 102 64.7
QL08p056843 Quercus lobata HOM05D005755 ORTHO05D007006 3.2e-27 125.2 113 62.8
EL10Ac5g11654 Beta vulgaris HOM05D005755 ORTHO05D007006 4.2e-27 124.8 97 67.0
CiPaw.15G145100 Carya illinoinensis HOM05D005755 ORTHO05D007006 4.2e-27 124.8 102 61.8
Eucgr.G02800 Eucalyptus grandis HOM05D005755 ORTHO05D007006 4.2e-27 124.8 102 60.8
FvH4_7g20160 Fragaria vesca HOM05D005755 ORTHO05D007006 4.2e-27 124.8 99 66.7
PGR142G0594 Punica granatum HOM05D005755 ORTHO05D007006 4.2e-27 124.8 102 60.8
Sabra08G0030600 Salix brachista HOM05D005755 ORTHO05D007006 4.2e-27 124.8 100 66.0
Potri.008G044200 Populus trichocarpa HOM05D005755 ORTHO05D007006 5.5e-27 124.4 102 64.7
Cfa019629 Carpinus fangiana HOM05D005755 ORTHO05D007006 7.1e-27 124.0 104 61.5
unitig_8.g3685 Utricularia gibba HOM05D005755 ORTHO05D007006 7.1e-27 124.0 100 69.0
AL8G32330 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 9.3e-27 123.6 97 64.9
MD07G1179300 Malus domestica HOM05D005755 ORTHO05D007006 9.3e-27 123.6 112 59.8
FAN06G3582 Fragaria x ananassa HOM05D005755 ORTHO05D007006 1.2e-26 123.2 99 64.6
Medtr6g068850 Medicago truncatula HOM05D005755 ORTHO05D007006 1.2e-26 123.2 100 61.0
Lj4g0006534 Lotus japonicus HOM05D005755 ORTHO05D007006 2.7e-26 122.1 102 59.8
MBI19_g25006_MAGBIO Magnolia biondii HOM05D005755 ORTHO05D007006 2.7e-26 122.1 97 64.9
BcaB05g23952 Brassica carinata HOM05D005755 ORTHO05D007006 3.5e-26 121.7 99 61.6
FAN01G0677 Fragaria x ananassa HOM05D005755 ORTHO05D007006 4.6e-26 121.3 99 64.6
Psat1g119080 Pisum sativum HOM05D005755 ORTHO05D007006 4.6e-26 121.3 100 61.0
Sed0018161 Sechium edule HOM05D005755 ORTHO05D007006 4.6e-26 121.3 112 55.4
Potri.010G217300 Populus trichocarpa HOM05D005755 ORTHO05D007006 6.0e-26 120.9 104 61.5
TWI38G1562 Tripterygium wilfordii HOM05D005755 ORTHO05D007006 1.0e-25 120.2 100 61.0
ATR1096G048 Amborella trichopoda HOM05D005755 ORTHO05D007006 1.3e-25 119.8 102 58.8
Lalb_Chr07g0186081 Lupinus albus HOM05D005755 ORTHO05D007006 1.3e-25 119.8 111 56.8
HPP92_016041 Vanilla planifolia HOM05D005755 ORTHO05D007006 1.3e-25 119.8 102 61.8
FAN03G2322 Fragaria x ananassa HOM05D005755 ORTHO05D007006 2.3e-25 119.0 96 65.6
PSO675G6920 Papaver somniferum HOM05D005755 ORTHO05D007006 2.3e-25 119.0 100 62.0
arahy.Tifrunner.gnm1.ann1.FL0JYU Arachis hypogaea HOM05D005755 ORTHO05D007006 3.9e-25 118.2 100 63.0
arahy.Tifrunner.gnm1.ann1.QA5RE0 Arachis hypogaea HOM05D005755 ORTHO05D007006 3.9e-25 118.2 100 63.0
CDE10G1261 Ceratophyllum demersum HOM05D005755 ORTHO05D007006 3.9e-25 118.2 98 62.2
MD01G1131200 Malus domestica HOM05D005755 ORTHO05D007006 8.7e-25 117.1 98 61.2
VMungo0251G2378 Vigna mungo HOM05D001210 ORTHO05D001036 8.7e-25 117.1 95 64.2
Aqoxy3G01116 Aquilegia oxysepala HOM05D005755 ORTHO05D007006 1.5e-24 116.3 101 58.4
Gohir.D01G118000 Gossypium hirsutum HOM05D005755 ORTHO05D007006 1.9e-24 115.9 116 54.3
SEGI_41538 Sequoiadendron giganteum HOM05D005755 ORTHO05D007006 5.6e-24 114.4 97 58.8
Os11g0133900 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 9.6e-24 113.6 97 61.9
Zm00001eb235420 Zea mays HOM05D005755 ORTHO05D007006 6.9e-22 107.5 101 59.4
Oeu057237.1 Olea europaea HOM05D005755 ORTHO05D007006 1.7e-20 102.8 75 64.0
Zm00001eb163500 Zea mays HOM05D005755 ORTHO05D007006 3.8e-20 101.7 101 56.4
Os12g0131266 Oryza sativa ssp. japonica HOM05D005755 ORTHO05D007006 2.7e-18 95.5 81 63.0
TPR.G31353 Trifolium pratense HOM05D005755 ORTHO05D007006 4.6e-18 94.7 59 76.3
SMO207G0003 Selaginella moellendorffii HOM05D005755 ORTHO05D007006 1.0e-17 93.6 103 53.4
Glyma.19G087500 Glycine max HOM05D005755 ORTHO05D007006 7.4e-16 87.4 66 69.7
Mapoly0006s0175 Marchantia polymorpha HOM05D005755 ORTHO05D007006 1.6e-15 86.3 101 45.5
AagrBONN_evm.TU.Sc2ySwM_362.2659 Anthoceros agrestis HOM05D005755 ORTHO05D007006 4.8e-15 84.7 100 46.0
Pp3c3_10790 Physcomitrium patens HOM05D005755 ORTHO05D007006 2.9e-12 75.5 97 42.3
Lj3g0006677 Lotus japonicus HOM05D005755 ORTHO05D007006 8.5e-12 73.9 63 57.1
A02p12030 Brassica napus HOM05D005755 ORTHO05D007006 3.6e-10 68.6 65 53.8
AL792U10010 Arabidopsis lyrata HOM05D005755 ORTHO05D007006 6.1e-10 67.8 62 54.8
HanXRQChr14g0436521 Helianthus annuus HOM05D005755 ORTHO05D007006 5.1e-09 64.7 69 49.3
Prupe.2G218400 Prunus persica HOM05D005755 ORTHO05D007006 1.1e-08 63.5 95 48.4
Lj3g0023846 Lotus japonicus HOM05D005755 ORTHO05D007006 1.5e-08 63.2 62 50.0
Haze_18895 Corylus avellana HOM05D005755 ORTHO05D007006 9.7e-08 60.5 88 40.9


User provided reference genes

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