Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2059 Salvia bowleyana HOM05D005512 ORTHO05D006716 8.1e-180 633.6 323 100.0
MSTRG.10360 Avicennia marina HOM05D005512 ORTHO05D006716 9.6e-32 141.7 375 34.9
Oeu056908.1 Olea europaea HOM05D005512 ORTHO05D006716 7.6e-21 105.5 363 29.5
arahy.Tifrunner.gnm1.ann1.S7MLB0 Arachis hypogaea HOM05D005512 ORTHO05D006716 5.7e-16 89.4 182 40.1
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 7.4e-16 89.0 190 35.8
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.3e-15 88.2 190 35.3
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.8e-15 87.0 189 35.4
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 1.1e-14 85.1 189 34.9
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.1e-14 85.1 189 34.9
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.1e-14 85.1 189 35.4
ECA238G0726 Erigeron canadensis HOM05D000284 ORTHO05D001229 1.8e-14 84.3 330 29.1
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.4e-14 84.0 305 30.2
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 3.1e-14 83.6 201 35.8
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 4.1e-14 83.2 322 29.2
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 6.9e-14 82.4 226 33.2
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 9.0e-14 82.0 250 30.8
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 1.2e-13 81.6 205 33.2
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 3.4e-13 80.1 331 28.1
HanXRQChr16g0518951 Helianthus annuus HOM05D005512 ORTHO05D006716 3.4e-13 80.1 332 30.7
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 3.4e-13 80.1 371 28.8
Lalb_Chr20g0112081 Lupinus albus HOM05D005512 ORTHO05D006716 3.4e-13 80.1 332 27.7
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 4.5e-13 79.7 330 28.2
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 5.9e-13 79.3 326 26.1
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 7.7e-13 79.0 195 36.9
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.0e-12 78.6 312 29.8
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.3e-12 78.2 181 34.3
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 1.7e-12 77.8 331 27.8
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 1.7e-12 77.8 191 34.0
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 1.7e-12 77.8 168 36.3
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 2.2e-12 77.4 255 30.6
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 2.2e-12 77.4 240 31.7
Peaxi162Scf00752g00310 Petunia axillaris HOM05D005512 ORTHO05D006716 2.2e-12 77.4 220 31.4
Peaxi162Scf36127g00005 Petunia axillaris HOM05D005512 ORTHO05D006716 2.2e-12 77.4 220 31.4
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 2.9e-12 77.0 221 30.8
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 3.8e-12 76.6 331 28.1
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 3.8e-12 76.6 209 32.5
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 6.5e-12 75.9 150 39.3
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 8.5e-12 75.5 211 34.1
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 1.1e-11 75.1 183 32.2
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 1.4e-11 74.7 318 28.9
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.4e-11 74.7 193 31.6
Glyma.19G193400 Glycine max HOM05D005512 ORTHO05D006716 2.5e-11 73.9 212 34.0
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.5e-11 73.9 182 34.6
CAN.G397.46 Capsicum annuum HOM05D005512 ORTHO05D006716 3.2e-11 73.6 319 27.9
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 4.2e-11 73.2 331 29.3
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.6e-10 71.2 178 33.7
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 2.1e-10 70.9 190 33.7
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 2.1e-10 70.9 345 29.3
Lsat_1_v5_gn_2_22561 Lactuca sativa HOM05D005512 ORTHO05D006716 2.7e-10 70.5 298 26.8
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 2.7e-10 70.5 325 28.0
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.7e-10 70.5 181 32.0
Actinidia08422 Actinidia chinensis HOM05D005512 ORTHO05D006716 4.6e-10 69.7 257 29.2
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 4.6e-10 69.7 199 31.2
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 6.1e-10 69.3 241 31.5
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 7.9e-10 68.9 380 28.7
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 1.0e-09 68.6 381 29.1
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 1.0e-09 68.6 296 29.1
Lj1g0021236 Lotus japonicus HOM05D005512 ORTHO05D006716 1.4e-09 68.2 222 31.5
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 1.4e-09 68.2 188 33.5
VMungo1383G0830 Vigna mungo HOM05D005512 ORTHO05D006716 1.4e-09 68.2 188 31.4
Hund14853 Selenicereus undatus HOM05D005512 ORTHO05D006716 1.8e-09 67.8 277 31.0
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.3e-09 67.4 381 28.1
PSO339G0823 Papaver somniferum HOM05D005512 ORTHO05D006716 2.3e-09 67.4 296 29.1
Phvul.001G188300 Phaseolus vulgaris HOM05D005512 ORTHO05D006716 2.3e-09 67.4 191 31.9
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 3.0e-09 67.0 184 31.5
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 3.0e-09 67.0 235 28.5
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 3.0e-09 67.0 364 31.0
Cc08_g02550 Coffea canephora HOM05D005512 ORTHO05D006716 3.0e-09 67.0 343 27.1
COL.COLO4_29783 Corchorus olitorius HOM05D005512 ORTHO05D006716 6.7e-09 65.9 189 32.8
Nitab4.5_0005756g0030 Nicotiana tabacum HOM05D005512 ORTHO05D006716 6.7e-09 65.9 185 35.1
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 8.8e-09 65.5 278 28.8
CSS0012282 Camellia sinensis var. sinensis HOM05D005512 ORTHO05D006716 1.5e-08 64.7 322 26.4
Duzib128G1345 Durio zibethinus HOM05D005512 ORTHO05D006716 1.5e-08 64.7 190 33.7
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 3.3e-08 63.5 180 29.4
EL10Ac7g16952 Beta vulgaris HOM05D005512 ORTHO05D006716 3.3e-08 63.5 294 27.6
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 3.3e-08 63.5 190 31.6
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 4.3e-08 63.2 247 29.6
Nitab4.5_0011780g0020 Nicotiana tabacum HOM05D005512 ORTHO05D006716 7.4e-08 62.4 208 34.1
Rhsim03G0078100 Rhododendron simsii HOM05D005512 ORTHO05D006716 1.3e-07 61.6 378 23.3
Lj2A133G43 Lonicera japonica HOM05D005512 ORTHO05D006716 1.7e-07 61.2 213 28.6
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 2.2e-07 60.8 192 31.8
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 2.2e-07 60.8 364 28.3
Lsat_1_v5_gn_6_66321 Lactuca sativa HOM05D005512 ORTHO05D006716 4.8e-07 59.7 306 25.8
Nitab4.5_0000794g0130 Nicotiana tabacum HOM05D005512 ORTHO05D006716 6.3e-07 59.3 257 28.8
Solyc09g009760.1 Solanum lycopersicum HOM05D005512 ORTHO05D006716 6.3e-07 59.3 233 26.6
Actinidia10388 Actinidia chinensis HOM05D005512 ORTHO05D006716 1.1e-06 58.5 198 27.3
Sopen09g004520 Solanum pennellii HOM05D005512 ORTHO05D006716 1.4e-06 58.2 260 27.3
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 1.8e-06 57.8 214 29.0
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 2.4e-06 57.4 219 31.1
Sc20g0006160 Simmondsia chinensis HOM05D005512 ORTHO05D006716 2.4e-06 57.4 193 30.1
Glyma.03G193300 Glycine max HOM05D005512 ORTHO05D006716 4.1e-06 56.6 100 42.0
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 9.1e-06 55.5 77 46.8


User provided reference genes

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