Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2040 Salvia bowleyana HOM05D005679 ORTHO05D007228 1.0e-123 446.8 235 100.0
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 2.2e-54 216.5 154 70.8
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 1.8e-51 206.8 163 67.5
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 4.7e-44 182.2 159 59.7
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 3.7e-41 172.6 160 55.0
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 1.1e-40 171.0 142 65.5
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 2.4e-40 169.9 155 56.8
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 5.3e-40 168.7 158 55.1
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 7.0e-40 168.3 161 52.8
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.0e-38 164.5 158 53.8
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 1.3e-38 164.1 157 56.1
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 1.7e-38 163.7 158 55.7
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 2.2e-38 163.3 149 53.7
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 3.8e-38 162.5 157 56.1
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 3.8e-38 162.5 159 53.5
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 3.8e-38 162.5 162 51.9
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 5.0e-38 162.2 157 55.4
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 5.0e-38 162.2 163 53.4
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 8.5e-38 161.4 159 53.5
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 1.1e-37 161.0 159 52.2
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.1e-37 161.0 201 44.8
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 4.2e-37 159.1 163 50.3
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 9.4e-37 157.9 160 50.6
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 1.2e-36 157.5 154 52.6
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 1.6e-36 157.1 154 52.6
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 2.1e-36 156.8 193 49.2
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 2.1e-36 156.8 172 50.0
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 2.7e-36 156.4 154 53.2
Lj2A135T55 Lonicera japonica HOM05D005679 ORTHO05D007228 4.7e-36 155.6 157 50.3
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 1.8e-35 153.7 154 50.0
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.8e-35 153.7 157 52.2
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 2.3e-35 153.3 154 50.0
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 3.0e-35 152.9 157 52.2
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 3.0e-35 152.9 158 50.6
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 4.0e-35 152.5 160 50.0
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 4.0e-35 152.5 155 49.7
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 5.2e-35 152.1 154 50.6
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 6.8e-35 151.8 163 49.1
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 6.8e-35 151.8 155 49.0
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 8.8e-35 151.4 157 52.2
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 8.8e-35 151.4 177 45.2
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.2e-34 151.0 157 52.2
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 1.2e-34 151.0 163 49.1
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 1.2e-34 151.0 164 50.6
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 1.5e-34 150.6 157 51.6
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 2.0e-34 150.2 167 52.1
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 7.5e-34 148.3 163 47.2
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 1.3e-33 147.5 154 48.1
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 1.7e-33 147.1 160 48.8
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 1.7e-33 147.1 160 49.4
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 2.2e-33 146.7 154 48.1
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 2.8e-33 146.4 163 47.9
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 2.8e-33 146.4 149 55.0
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 4.8e-33 145.6 160 48.8
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 4.8e-33 145.6 157 49.7
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 8.3e-33 144.8 154 51.3
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 1.1e-32 144.4 163 47.2
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 1.4e-32 144.1 160 49.4
CARHR130580 Cardamine hirsuta HOM05D005679 ORTHO05D007228 3.1e-32 142.9 160 48.1
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 5.4e-32 142.1 182 44.5
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 9.1e-32 141.4 167 46.7
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 1.2e-31 141.0 182 43.4
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 2.0e-31 140.2 160 48.1
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 2.0e-31 140.2 154 46.8
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 3.5e-31 139.4 160 49.4
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 5.9e-31 138.7 162 48.8
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 7.7e-31 138.3 154 46.1
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 7.7e-31 138.3 158 48.1
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 7.7e-31 138.3 157 47.8
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 1.0e-30 137.9 159 46.5
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 1.0e-30 137.9 170 45.9
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.0e-30 137.9 154 46.1
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 1.3e-30 137.5 156 48.7
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 2.2e-30 136.7 159 46.5
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 2.2e-30 136.7 159 46.5
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 2.9e-30 136.3 147 46.9
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 2.9e-30 136.3 154 46.8
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 3.8e-30 136.0 163 47.2
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 5.0e-30 135.6 154 46.8
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 6.5e-30 135.2 159 45.3
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 2.5e-29 133.3 160 45.6
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 2.5e-29 133.3 152 47.4
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 2.5e-29 133.3 154 46.1
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 3.2e-29 132.9 184 40.8
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 4.2e-29 132.5 145 48.3
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 6.8e-27 125.2 166 44.6
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 3.4e-26 122.9 157 45.2
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 7.5e-26 121.7 169 41.4
Dinv31674 Davidia involucrata HOM05D005679 ORTHO05D007228 2.2e-25 120.2 184 41.3
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 8.3e-25 118.2 155 45.2
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 2.0e-23 113.6 158 44.3
SEGI_36814 Sequoiadendron giganteum HOM05D005679 ORTHO05D007228 1.0e-22 111.3 166 39.2
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 1.7e-22 110.5 155 40.0
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 3.8e-22 109.4 157 40.1
AUR62033501 Chenopodium quinoa HOM05D005679 ORTHO05D007228 8.6e-22 108.2 187 38.0
AUR62028549 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.5e-21 106.7 158 40.5
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 2.0e-18 97.1 160 40.0
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 4.4e-18 95.9 118 44.9
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 3.7e-17 92.8 105 46.7
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 3.7e-17 92.8 179 35.2
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 7.0e-16 88.6 158 34.2
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 9.5e-13 78.2 163 35.6
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 3.6e-12 76.3 78 44.9
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 1.8e-11 73.9 149 32.9
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 1.8e-11 73.9 149 30.9
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 3.7e-09 66.2 71 45.1
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 4.6e-07 59.3 103 36.9
Actinidia14313 Actinidia chinensis HOM05D005679 ORTHO05D007228 2.3e-06 57.0 45 62.2
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 3.9e-06 56.2 71 42.3


User provided reference genes

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