Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G2028 Salvia bowleyana HOM05D006283 ORTHO05D007727 2.9e-162 575.1 273 100.0
MSTRG.9766 Avicennia marina HOM05D006283 ORTHO05D007727 2.4e-124 449.1 272 76.5
Migut.N02075 Erythranthe guttata HOM05D006283 ORTHO05D007727 1.3e-122 443.4 274 75.5
Dinv22729 Davidia involucrata HOM05D006283 ORTHO05D007727 9.4e-121 437.2 270 74.4
Cc03_g13090 Coffea canephora HOM05D006283 ORTHO05D007727 6.1e-120 434.5 270 74.1
Peaxi162Scf00126g00015 Petunia axillaris HOM05D006283 ORTHO05D007727 2.5e-118 429.1 273 71.8
TAR362G0864 Trochodendron aralioides HOM05D006283 ORTHO05D007727 1.8e-116 422.9 263 73.4
Ciclev10021635m.g Citrus clementina HOM05D006283 ORTHO05D007727 1.2e-115 420.2 270 72.2
Manes.11G120300 Manihot esculenta HOM05D006283 ORTHO05D007727 4.5e-115 418.3 270 70.7
Sopen06g019520 Solanum pennellii HOM05D006283 ORTHO05D007727 1.0e-114 417.2 261 72.4
Solyc06g054450.3 Solanum lycopersicum HOM05D006283 ORTHO05D007727 2.2e-114 416.0 261 72.4
Atru.chr3.1494 Acer truncatum HOM05D006283 ORTHO05D007727 2.9e-114 415.6 269 68.4
CAN.G1247.5 Capsicum annuum HOM05D006283 ORTHO05D007727 2.9e-114 415.6 269 71.4
Actinidia35975 Actinidia chinensis HOM05D006283 ORTHO05D007727 1.1e-113 413.7 268 70.1
Hma1.2p1_0847F.1_g227833 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 9.4e-113 410.6 245 74.7
CANSAT78G1066 Cannabis sativa HOM05D006283 ORTHO05D007727 7.9e-112 407.5 267 70.0
CiPaw.02G054900 Carya illinoinensis HOM05D006283 ORTHO05D007727 7.9e-112 407.5 263 69.6
Eucgr.H00372 Eucalyptus grandis HOM05D006283 ORTHO05D007727 7.9e-112 407.5 270 68.5
Glyma.11G127900 Glycine max HOM05D006283 ORTHO05D007727 5.1e-111 404.8 262 71.0
Prupe.1G192800 Prunus persica HOM05D006283 ORTHO05D007727 5.1e-111 404.8 270 68.5
VMungo1127G0333 Vigna mungo HOM05D006283 ORTHO05D007727 5.1e-111 404.8 268 69.8
GSVIVG01010753001 Vitis vinifera HOM05D006283 ORTHO05D007727 8.8e-111 404.1 266 69.5
Gohir.D10G129700 Gossypium hirsutum HOM05D006283 ORTHO05D007727 1.1e-110 403.7 267 68.5
Gorai.011G143000 Gossypium raimondii HOM05D006283 ORTHO05D007727 1.1e-110 403.7 267 68.5
Ca_20784_v3 Cicer arietinum L. HOM05D006283 ORTHO05D007727 1.5e-110 403.3 264 70.8
Phvul.011G054600 Phaseolus vulgaris HOM05D006283 ORTHO05D007727 2.6e-110 402.5 267 69.7
Potri.019G051300 Populus trichocarpa HOM05D006283 ORTHO05D007727 2.6e-110 402.5 268 68.3
Thecc.04G180000 Theobroma cacao HOM05D006283 ORTHO05D007727 1.3e-109 400.2 263 68.8
Actinidia34602 Actinidia chinensis HOM05D006283 ORTHO05D007727 2.8e-109 399.1 268 68.7
Gohir.A10G137000 Gossypium hirsutum HOM05D006283 ORTHO05D007727 3.7e-109 398.7 267 67.4
MD04G1040100 Malus domestica HOM05D006283 ORTHO05D007727 4.8e-109 398.3 267 67.0
TPR.G34200 Trifolium pratense HOM05D006283 ORTHO05D007727 6.3e-109 397.9 248 73.0
Rhsim09G0027900 Rhododendron simsii HOM05D006283 ORTHO05D007727 1.4e-108 396.7 286 65.7
Nn1g09881 Nelumbo nucifera HOM05D006283 ORTHO05D007727 2.4e-108 396.0 267 68.9
DCAR_029916 Daucus carota HOM05D006283 ORTHO05D007727 3.1e-108 395.6 267 65.2
Aqoxy2G04092 Aquilegia oxysepala HOM05D006283 ORTHO05D007727 5.3e-108 394.8 267 66.3
THA.LOC104803704 Tarenaya hassleriana HOM05D006283 ORTHO05D007727 7.0e-108 394.4 268 66.4
Oeu034461.3 Olea europaea HOM05D006283 ORTHO05D007727 1.2e-107 393.7 267 68.9
PGR142G0689 Punica granatum HOM05D006283 ORTHO05D007727 1.5e-107 393.3 263 68.1
MELO3C017715.2 Cucumis melo HOM05D006283 ORTHO05D007727 2.6e-107 392.5 273 64.8
CsaV3_4G003450 Cucumis sativus L. HOM05D006283 ORTHO05D007727 3.5e-107 392.1 273 64.5
PSO675G6362 Papaver somniferum HOM05D006283 ORTHO05D007727 3.5e-107 392.1 267 67.0
TWI15G0224 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 4.5e-107 391.7 249 68.3
TWI15G1054 Tripterygium wilfordii HOM05D006283 ORTHO05D007727 4.5e-107 391.7 249 68.3
PSO017G4585 Papaver somniferum HOM05D006283 ORTHO05D007727 5.9e-107 391.3 251 69.3
Lj3g0020373 Lotus japonicus HOM05D006283 ORTHO05D007727 7.7e-107 391.0 263 68.8
FvH4_4g10770 Fragaria vesca HOM05D006283 ORTHO05D007727 1.3e-106 390.2 269 66.2
RcHm_v2.0_Chr4g0406391 Rosa chinensis HOM05D006283 ORTHO05D007727 1.7e-106 389.8 264 67.4
Nitab4.5_0000130g0340 Nicotiana tabacum HOM05D006283 ORTHO05D007727 2.2e-106 389.4 252 70.2
AT3G59390 Arabidopsis thaliana HOM05D006283 ORTHO05D007727 6.5e-106 387.9 271 64.9
Medtr4g067140 Medicago truncatula HOM05D006283 ORTHO05D007727 1.1e-105 387.1 262 68.7
Lsat_1_v5_gn_4_30241 Lactuca sativa HOM05D006283 ORTHO05D007727 1.4e-105 386.7 266 66.9
Sc13g0006800 Simmondsia chinensis HOM05D006283 ORTHO05D007727 5.5e-105 384.8 289 62.3
Thhalv10006168m.g Eutrema salsugineum HOM05D006283 ORTHO05D007727 7.2e-105 384.4 267 65.5
AL5G41290 Arabidopsis lyrata HOM05D006283 ORTHO05D007727 1.2e-104 383.6 270 64.8
HanXRQChr16g0525531 Helianthus annuus HOM05D006283 ORTHO05D007727 1.6e-104 383.3 260 67.3
ECA234G3618 Erigeron canadensis HOM05D006283 ORTHO05D007727 1.8e-103 379.8 251 68.9
CARHR169780 Cardamine hirsuta HOM05D006283 ORTHO05D007727 5.2e-103 378.3 267 63.3
Sp5g03750 Schrenkiella parvula HOM05D006283 ORTHO05D007727 5.2e-103 378.3 270 64.4
Carub.0005s2613 Capsella rubella HOM05D006283 ORTHO05D007727 9.7e-102 374.0 268 62.7
Lalb_Chr01g0003171 Lupinus albus HOM05D006283 ORTHO05D007727 1.3e-101 373.6 263 65.0
Sed0010312 Sechium edule HOM05D006283 ORTHO05D007727 1.3e-101 373.6 273 61.2
BraA07t30108Z Brassica rapa HOM05D006283 ORTHO05D007727 2.8e-101 372.5 267 64.0
BolC6t37776H Brassica oleracea HOM05D006283 ORTHO05D007727 4.8e-101 371.7 270 63.7
C06p26110 Brassica napus HOM05D006283 ORTHO05D007727 8.2e-101 370.9 270 63.3
Aa31LG10G13740 Aethionema arabicum HOM05D006283 ORTHO05D007727 1.1e-100 370.5 270 61.9
A07p24630 Brassica napus HOM05D006283 ORTHO05D007727 1.4e-100 370.2 267 63.3
Sed0022341 Sechium edule HOM05D006283 ORTHO05D007727 1.4e-100 370.2 274 63.1
PGSC0003DMG400030791 Solanum tuberosum HOM05D006283 ORTHO05D007727 5.3e-100 368.2 222 74.3
Lalb_Chr03g0026141 Lupinus albus HOM05D006283 ORTHO05D007727 9.4e-97 357.5 251 64.1
COL.COLO4_07661 Corchorus olitorius HOM05D006283 ORTHO05D007727 1.8e-95 353.2 242 66.1
unitig_747.g21679 Utricularia gibba HOM05D006283 ORTHO05D007727 2.6e-94 349.4 249 62.2
Duzib151G0050 Durio zibethinus HOM05D006283 ORTHO05D007727 5.7e-94 348.2 234 67.5
Zm00001eb406800 Zea mays HOM05D006283 ORTHO05D007727 7.5e-94 347.8 254 60.2
FAN12G2405 Fragaria x ananassa HOM05D006283 ORTHO05D007727 3.1e-92 342.4 254 62.6
EL10Ac3g05930 Beta vulgaris HOM05D006283 ORTHO05D007727 5.0e-90 335.1 234 64.5
arahy.Tifrunner.gnm1.ann1.7GR0QN Arachis hypogaea HOM05D006283 ORTHO05D007727 3.2e-89 332.4 244 65.6
arahy.Tifrunner.gnm1.ann1.9EYB94 Arachis hypogaea HOM05D006283 ORTHO05D007727 7.2e-89 331.3 244 65.2
Haze_01514 Corylus avellana HOM05D006283 ORTHO05D007727 1.6e-88 330.1 282 57.1
BcaB02g07471 Brassica carinata HOM05D006283 ORTHO05D007727 2.3e-87 326.2 236 63.1
CDE08G0087 Ceratophyllum demersum HOM05D006283 ORTHO05D007727 4.0e-87 325.5 230 63.9
BcaC08g44981 Brassica carinata HOM05D006283 ORTHO05D007727 2.8e-85 319.3 236 62.7
Hund12011 Selenicereus undatus HOM05D006283 ORTHO05D007727 2.7e-83 312.8 194 71.1
AUR62015391 Chenopodium quinoa HOM05D006283 ORTHO05D007727 2.5e-81 306.2 193 70.5
SGA_v2.0_scaffold12G06158 Striga asiatica HOM05D006283 ORTHO05D007727 7.2e-81 304.7 267 58.8
HPP92_009172 Vanilla planifolia HOM05D006283 ORTHO05D007727 1.2e-78 297.4 235 57.9
AUR62002299 Chenopodium quinoa HOM05D006283 ORTHO05D007727 1.4e-76 290.4 182 70.9
Duzib268G1109 Durio zibethinus HOM05D006283 ORTHO05D007727 9.2e-76 287.7 175 75.4
Pp3c25_2030 Physcomitrium patens HOM05D006283 ORTHO05D007727 7.3e-73 278.1 236 54.7
Mapoly0093s0081 Marchantia polymorpha HOM05D006283 ORTHO05D007727 1.8e-71 273.5 234 48.7
SMO119G0098 Selaginella moellendorffii HOM05D006283 ORTHO05D007727 9.8e-70 267.7 236 49.2
Glyma.12G052600 Glycine max HOM05D006283 ORTHO05D007727 6.6e-66 255.0 186 64.5
QL10p048744 Quercus lobata HOM05D006283 ORTHO05D007727 9.2e-60 234.6 152 67.1
Lj3A196G22 Lonicera japonica HOM05D006283 ORTHO05D007727 1.9e-57 226.9 138 69.6
Sabra19G0057300 Salix brachista HOM05D006283 ORTHO05D007727 6.4e-53 211.8 144 66.7
SEGI_31631 Sequoiadendron giganteum HOM05D006283 ORTHO05D007727 1.1e-52 211.1 163 57.1
ATR0824G015 Amborella trichopoda HOM05D006283 ORTHO05D007727 2.3e-50 203.4 144 63.9
Hma1.2p1_0639F.1_g194055 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 6.6e-50 201.8 131 73.3
Hma1.2p1_0847F.1_g227840 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 6.6e-50 201.8 131 73.3
FAN07G2518 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.2e-48 197.6 138 67.4
QL10p048749 Quercus lobata HOM05D006283 ORTHO05D007727 2.1e-43 180.3 109 74.3
RcHm_v2.0_Chr4g0406831 Rosa chinensis HOM05D006283 ORTHO05D007727 1.3e-42 177.6 146 56.2
FAN12G0556 Fragaria x ananassa HOM05D006283 ORTHO05D007727 1.7e-42 177.2 129 58.1
vmacro00624 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 9.6e-41 171.4 150 58.0
Cre16.g673841 Chlamydomonas reinhardtii HOM05D006283 ORTHO05D007727 2.3e-34 150.2 238 34.0
Prupe.1G193700 Prunus persica HOM05D006283 ORTHO05D007727 4.0e-31 139.4 98 65.3
ClCG07G015660 Citrullus lanatus HOM05D006283 ORTHO05D007727 3.9e-26 122.9 264 36.0
Peaxi162Scf00126g00003 Petunia axillaris HOM05D006283 ORTHO05D007727 1.1e-25 121.3 110 54.5
Psat7g091240 Pisum sativum HOM05D006283 ORTHO05D007727 2.8e-24 116.7 167 42.5
Lj3A196T13 Lonicera japonica HOM05D006283 ORTHO05D007727 2.0e-22 110.5 95 55.8
RcHm_v2.0_Chr4g0406821 Rosa chinensis HOM05D006283 ORTHO05D007727 2.6e-22 110.2 62 75.8
vmacro00625 Vaccinium macrocarpon HOM05D006283 ORTHO05D007727 2.3e-18 97.1 60 75.0
HanXRQChr16g0525261 Helianthus annuus HOM05D006283 ORTHO05D007727 1.5e-17 94.4 62 69.4
Hma1.2p1_0639F.1_g194050 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.1e-15 86.7 43 86.0
Hma1.2p1_0847F.1_g227839 Hydrangea macrophylla HOM05D006283 ORTHO05D007727 3.1e-15 86.7 43 86.0
Os11g0267100 Oryza sativa ssp. japonica HOM05D006283 ORTHO05D007727 1.9e-12 77.4 59 54.2
PRCOL_00001858 Prasinoderma coloniale HOM05D006283 ORTHO05D007727 5.5e-12 75.9 146 30.1
CSS0010514 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 9.7e-09 65.1 38 71.1
CSS0034877 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 9.7e-09 65.1 38 71.1
C09p49630 Brassica napus HOM05D006283 ORTHO05D007727 1.3e-08 64.7 44 59.1
BolC3t18408H Brassica oleracea HOM05D006283 ORTHO05D007727 1.3e-08 64.7 44 59.1
Cfa015166 Carpinus fangiana HOM05D006283 ORTHO05D007727 1.3e-08 64.7 41 68.3
Ah.07g201980 Amaranthus hybridus HOM05D006283 ORTHO05D007727 5.3e-07 59.3 37 67.6
CSS0022675 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 5.3e-07 59.3 93 37.6
CSS0026672 Camellia sinensis var. sinensis HOM05D006283 ORTHO05D007727 6.9e-07 58.9 71 43.7


User provided reference genes

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