Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G1981 Salvia bowleyana HOM05D002160 ORTHO05D002012 5.8e-27 123.6 69 100.0
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.1e-12 76.3 67 56.7
Solyc06g005465.1 Solanum lycopersicum HOM05D002160 ORTHO05D002012 2.4e-12 75.1 52 71.2
Sopen06g001440 Solanum pennellii HOM05D002160 ORTHO05D002012 1.2e-11 72.8 52 69.2
Cc01_g12850 Coffea canephora HOM05D002160 ORTHO05D002012 4.5e-11 70.9 70 57.1
Dinv12424 Davidia involucrata HOM05D002160 ORTHO05D002012 4.9e-10 67.4 52 65.4
Peaxi162Scf00946g00028 Petunia axillaris HOM05D002160 ORTHO05D002012 1.4e-09 65.9 74 52.7
Dinv17000 Davidia involucrata HOM05D002160 ORTHO05D002012 1.9e-09 65.5 52 63.5
Dinv42949 Davidia involucrata HOM05D002160 ORTHO05D002012 1.9e-09 65.5 52 63.5
Dinv43151 Davidia involucrata HOM05D002160 ORTHO05D002012 1.9e-09 65.5 52 63.5
Nitab4.5_0003635g0040 Nicotiana tabacum HOM05D002160 ORTHO05D002012 3.2e-09 64.7 64 50.0
Nitab4.5_0022803g0010 Nicotiana tabacum HOM05D002160 ORTHO05D002012 4.2e-09 64.3 49 63.3
CAN.G111.42 Capsicum annuum HOM05D002160 ORTHO05D002012 5.4e-09 63.9 52 63.5
CAN.G394.56 Capsicum annuum HOM05D002160 ORTHO05D002012 1.2e-08 62.8 52 57.7
Nitab4.5_0000317g0020 Nicotiana tabacum HOM05D002160 ORTHO05D002012 1.2e-08 62.8 73 47.9
Hma1.2p1_0035F.1_g022400 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 2.7e-08 61.6 53 60.4
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 6.0e-08 60.5 51 58.8
Hma1.2p1_0418F.1_g149080 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 6.0e-08 60.5 53 56.6
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 6.0e-08 60.5 52 61.5
Oeu007792.1 Olea europaea HOM05D002160 ORTHO05D002012 7.9e-08 60.1 77 51.9
BcaC01g04233 Brassica carinata HOM05D002160 ORTHO05D002012 1.0e-07 59.7 72 50.0
Oeu051437.1 Olea europaea HOM05D002160 ORTHO05D002012 1.0e-07 59.7 64 50.0
CSS0035762 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.3e-07 59.3 76 52.6
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.3e-07 59.3 79 50.6
Lsat_1_v5_gn_9_23460 Lactuca sativa HOM05D002160 ORTHO05D002012 1.3e-07 59.3 75 50.7
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 1.8e-07 58.9 51 56.9
C03p43610 Brassica napus HOM05D002160 ORTHO05D002012 2.3e-07 58.5 75 48.0
Os12g0567800 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 2.3e-07 58.5 79 44.3
CSS0001348 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 3.0e-07 58.2 76 51.3
Haze_24095 Corylus avellana HOM05D002160 ORTHO05D002012 3.0e-07 58.2 70 58.6
ECA247G1660 Erigeron canadensis HOM05D002160 ORTHO05D002012 3.0e-07 58.2 75 50.7
Lsat_1_v5_gn_8_73001 Lactuca sativa HOM05D002160 ORTHO05D002012 3.0e-07 58.2 52 57.7
COL.COLO4_19168 Corchorus olitorius HOM05D002160 ORTHO05D002012 3.9e-07 57.8 47 61.7
A03p35970 Brassica napus HOM05D002160 ORTHO05D002012 5.1e-07 57.4 75 46.7
Cfa011500 Carpinus fangiana HOM05D002160 ORTHO05D002012 5.1e-07 57.4 70 58.6
HanXRQChr11g0350841 Helianthus annuus HOM05D002160 ORTHO05D002012 5.1e-07 57.4 75 49.3
Os12g0571100 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 5.1e-07 57.4 79 44.3
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 5.1e-07 57.4 52 59.6
QL07p048278 Quercus lobata HOM05D002160 ORTHO05D002012 5.1e-07 57.4 75 48.0
Rhsim04G0157100 Rhododendron simsii HOM05D002160 ORTHO05D002012 5.1e-07 57.4 47 53.2
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 5.1e-07 57.4 70 47.1
Haze_11621 Corylus avellana HOM05D002160 ORTHO05D002012 6.7e-07 57.0 52 59.6
Hma1.2p1_0035F.1_g022410 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 8.7e-07 56.6 74 47.3
CANSAT35G0429 Cannabis sativa HOM05D002160 ORTHO05D002012 1.1e-06 56.2 47 59.6
Gohir.A13G224300 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.1e-06 56.2 48 60.4
Gohir.D13G229100 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.1e-06 56.2 48 60.4
Gorai.013G260000 Gossypium raimondii HOM05D002160 ORTHO05D002012 1.1e-06 56.2 48 60.4
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 1.1e-06 56.2 77 48.1
PGR004G1599 Punica granatum HOM05D002160 ORTHO05D002012 1.1e-06 56.2 52 55.8
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 1.1e-06 56.2 51 56.9
Dinv35604 Davidia involucrata HOM05D002160 ORTHO05D002012 1.5e-06 55.8 52 53.8
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.9e-06 55.5 51 54.9
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 1.9e-06 55.5 51 54.9
ECA236G3652 Erigeron canadensis HOM05D002160 ORTHO05D002012 1.9e-06 55.5 76 48.7
Hma1.2p1_0418F.1_g149100 Hydrangea macrophylla HOM05D002160 ORTHO05D002012 1.9e-06 55.5 53 56.6
Os12g0568200 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 1.9e-06 55.5 80 42.5
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 1.9e-06 55.5 52 57.7
PGR102G1600 Punica granatum HOM05D002160 ORTHO05D002012 1.9e-06 55.5 44 59.1
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 1.9e-06 55.5 52 53.8
GSVIVG01027808001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.9e-06 55.5 43 58.1
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 2.5e-06 55.1 45 64.4
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 2.5e-06 55.1 51 56.9
Cpa.g.sc81.153 Carica papaya HOM05D002160 ORTHO05D002012 2.5e-06 55.1 70 50.0
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 2.5e-06 55.1 55 54.5
TWI31G0007 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 2.5e-06 55.1 51 52.9
Atru.chr3.3900 Acer truncatum HOM05D002160 ORTHO05D002012 3.3e-06 54.7 78 57.7
Atru.chr3.3901 Acer truncatum HOM05D002160 ORTHO05D002012 3.3e-06 54.7 78 57.7
Gohir.D01G211900 Gossypium hirsutum HOM05D002160 ORTHO05D002012 3.3e-06 54.7 78 46.2
Os12g0568500 Oryza sativa ssp. japonica HOM05D002160 ORTHO05D002012 3.3e-06 54.7 80 42.5
MBI14_g20107_MAGBIO Magnolia biondii HOM05D002160 ORTHO05D002012 4.3e-06 54.3 52 55.8
MD12G1141500 Malus domestica HOM05D002160 ORTHO05D002012 4.3e-06 54.3 51 56.9
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 4.3e-06 54.3 46 56.5
TWI31G0178 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 5.6e-06 53.9 51 54.9
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 7.4e-06 53.5 51 52.9
Gorai.007G376000 Gossypium raimondii HOM05D002160 ORTHO05D002012 7.4e-06 53.5 72 48.6
Prupe.6G077800 Prunus persica HOM05D002160 ORTHO05D002012 7.4e-06 53.5 75 56.0
Glyma.17G230500 Glycine max HOM05D002160 ORTHO05D002012 9.6e-06 53.1 48 54.2
Gohir.D11G345700 Gossypium hirsutum HOM05D002160 ORTHO05D002012 9.6e-06 53.1 72 48.6
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 9.6e-06 53.1 52 55.8


User provided reference genes

Program Settings