Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G1595 Salvia bowleyana HOM05D003138 ORTHO05D003789 1.7e-91 339.3 175 100.0
MSTRG.15346 Avicennia marina HOM05D003138 ORTHO05D003789 2.5e-50 202.6 164 65.2
Lsat_1_v5_gn_2_82660 Lactuca sativa HOM05D003138 ORTHO05D003789 7.2e-50 201.1 164 67.1
Oeu017637.1 Olea europaea HOM05D003138 ORTHO05D003789 2.7e-49 199.1 159 67.3
Cc07_g07170 Coffea canephora HOM05D003138 ORTHO05D003789 4.0e-48 195.3 161 65.8
Migut.L00418 Erythranthe guttata HOM05D003138 ORTHO05D003789 1.2e-47 193.7 164 64.6
Sc07g0000530 Simmondsia chinensis HOM05D003138 ORTHO05D003789 2.0e-47 193.0 158 64.6
ECA238G1545 Erigeron canadensis HOM05D003138 ORTHO05D003789 3.4e-47 192.2 163 63.8
Lalb_Chr16g0378901 Lupinus albus HOM05D003138 ORTHO05D003789 4.4e-47 191.8 156 67.3
SGA_v2.0_scaffold15G07466 Striga asiatica HOM05D003138 ORTHO05D003789 4.4e-47 191.8 163 63.8
PGSC0003DMG400021414 Solanum tuberosum HOM05D003138 ORTHO05D003789 7.5e-47 191.0 159 63.5
Sopen02g036840 Solanum pennellii HOM05D003138 ORTHO05D003789 1.3e-46 190.3 159 62.9
Solyc02g092260.3 Solanum lycopersicum HOM05D003138 ORTHO05D003789 1.7e-46 189.9 159 62.9
EL10Ac6g15613 Beta vulgaris HOM05D003138 ORTHO05D003789 2.2e-46 189.5 155 64.5
CAN.G1075.45 Capsicum annuum HOM05D003138 ORTHO05D003789 2.2e-46 189.5 159 62.3
Gohir.A02G151100 Gossypium hirsutum HOM05D003138 ORTHO05D003789 2.2e-46 189.5 161 62.7
Nitab4.5_0004242g0020 Nicotiana tabacum HOM05D003138 ORTHO05D003789 2.2e-46 189.5 164 62.2
Dinv26939 Davidia involucrata HOM05D003138 ORTHO05D003789 4.9e-46 188.3 156 64.7
Gohir.D03G029200 Gossypium hirsutum HOM05D003138 ORTHO05D003789 4.9e-46 188.3 161 62.1
Gorai.003G030900 Gossypium raimondii HOM05D003138 ORTHO05D003789 4.9e-46 188.3 161 62.1
HanXRQChr14g0445291 Helianthus annuus HOM05D003138 ORTHO05D003789 4.9e-46 188.3 164 63.4
Lj4C163T19 Lonicera japonica HOM05D003138 ORTHO05D003789 4.9e-46 188.3 163 62.6
AUR62007523 Chenopodium quinoa HOM05D003138 ORTHO05D003789 6.3e-46 188.0 156 62.2
Sp4g01950 Schrenkiella parvula HOM05D003138 ORTHO05D003789 6.3e-46 188.0 156 65.4
C01p01500 Brassica napus HOM05D003138 ORTHO05D003789 8.3e-46 187.6 156 65.4
Carub.0004s0206 Capsella rubella HOM05D003138 ORTHO05D003789 1.1e-45 187.2 156 64.7
Carub.0007s0260 Capsella rubella HOM05D003138 ORTHO05D003789 1.1e-45 187.2 156 64.7
DCAR_025812 Daucus carota HOM05D003138 ORTHO05D003789 1.1e-45 187.2 159 63.5
Lalb_Chr05g0213741 Lupinus albus HOM05D003138 ORTHO05D003789 1.1e-45 187.2 156 64.7
Lalb_Chr09g0323651 Lupinus albus HOM05D003138 ORTHO05D003789 1.1e-45 187.2 156 63.5
Sp7g35320 Schrenkiella parvula HOM05D003138 ORTHO05D003789 1.1e-45 187.2 156 64.7
AT4G37670 Arabidopsis thaliana HOM05D003138 ORTHO05D003789 1.4e-45 186.8 156 65.4
PGSC0003DMG400009061 Solanum tuberosum HOM05D003138 ORTHO05D003789 1.4e-45 186.8 159 62.9
vmacro18022 Vaccinium macrocarpon HOM05D003138 ORTHO05D003789 1.4e-45 186.8 188 57.4
AT2G22910 Arabidopsis thaliana HOM05D003138 ORTHO05D003789 1.8e-45 186.4 156 64.7
A01p01350 Brassica napus HOM05D003138 ORTHO05D003789 1.8e-45 186.4 156 64.7
BolC1t00147H Brassica oleracea HOM05D003138 ORTHO05D003789 1.8e-45 186.4 156 64.7
BraA01t00131Z Brassica rapa HOM05D003138 ORTHO05D003789 1.8e-45 186.4 156 64.7
Solyc03g043950.4 Solanum lycopersicum HOM05D003138 ORTHO05D003789 1.8e-45 186.4 159 62.3
Sopen03g007770 Solanum pennellii HOM05D003138 ORTHO05D003789 1.8e-45 186.4 159 62.3
AL7G13100 Arabidopsis lyrata HOM05D003138 ORTHO05D003789 2.4e-45 186.0 156 64.7
Peaxi162Scf00548g00320 Petunia axillaris HOM05D003138 ORTHO05D003789 2.4e-45 186.0 159 62.3
AL4G12540 Arabidopsis lyrata HOM05D003138 ORTHO05D003789 3.1e-45 185.7 156 64.1
THA.LOC104804210 Tarenaya hassleriana HOM05D003138 ORTHO05D003789 3.1e-45 185.7 156 64.1
CARHR246040 Cardamine hirsuta HOM05D003138 ORTHO05D003789 4.1e-45 185.3 156 64.7
Nitab4.5_0001417g0050 Nicotiana tabacum HOM05D003138 ORTHO05D003789 4.1e-45 185.3 159 62.9
BcaNung02076 Brassica carinata HOM05D003138 ORTHO05D003789 5.4e-45 184.9 158 63.3
BcaNung02080 Brassica carinata HOM05D003138 ORTHO05D003789 5.4e-45 184.9 158 63.3
Haze_15275 Corylus avellana HOM05D003138 ORTHO05D003789 5.4e-45 184.9 161 62.1
CSS0026901 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 7.0e-45 184.5 159 63.5
CSS0031065 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 9.1e-45 184.1 159 62.9
Cfa004138 Carpinus fangiana HOM05D003138 ORTHO05D003789 9.1e-45 184.1 161 62.1
Duzib147G0023 Durio zibethinus HOM05D003138 ORTHO05D003789 9.1e-45 184.1 156 60.9
Eucgr.I00696 Eucalyptus grandis HOM05D003138 ORTHO05D003789 9.1e-45 184.1 156 64.7
Manes.13G110800 Manihot esculenta HOM05D003138 ORTHO05D003789 9.1e-45 184.1 159 62.3
Rhsim08G0093000 Rhododendron simsii HOM05D003138 ORTHO05D003789 9.1e-45 184.1 159 62.3
TAR625G1113 Trochodendron aralioides HOM05D003138 ORTHO05D003789 9.1e-45 184.1 159 63.5
arahy.Tifrunner.gnm1.ann1.GP9GZC Arachis hypogaea HOM05D003138 ORTHO05D003789 1.6e-44 183.3 156 63.5
A03p65450 Brassica napus HOM05D003138 ORTHO05D003789 1.6e-44 183.3 158 62.0
BraA03t15597Z Brassica rapa HOM05D003138 ORTHO05D003789 1.6e-44 183.3 158 62.0
Sabra07G0003800 Salix brachista HOM05D003138 ORTHO05D003789 1.6e-44 183.3 161 60.9
TWI23G0805 Tripterygium wilfordii HOM05D003138 ORTHO05D003789 2.0e-44 183.0 156 64.1
MSTRG.3474 Avicennia marina HOM05D003138 ORTHO05D003789 2.7e-44 182.6 163 58.9
C07p62550 Brassica napus HOM05D003138 ORTHO05D003789 2.7e-44 182.6 158 62.0
BolC7t46670H Brassica oleracea HOM05D003138 ORTHO05D003789 2.7e-44 182.6 158 62.0
CSS0044411 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 2.7e-44 182.6 156 64.1
CSS0050461 Camellia sinensis var. sinensis HOM05D003138 ORTHO05D003789 2.7e-44 182.6 156 64.1
Atru.chr3.1022 Acer truncatum HOM05D003138 ORTHO05D003789 3.5e-44 182.2 161 62.1
BcaNung02073 Brassica carinata HOM05D003138 ORTHO05D003789 4.5e-44 181.8 158 62.0
CiPaw.01G003900 Carya illinoinensis HOM05D003138 ORTHO05D003789 4.5e-44 181.8 168 60.1
Ciclev10025194m.g Citrus clementina HOM05D003138 ORTHO05D003789 4.5e-44 181.8 161 62.1
Glyma.17G160300 Glycine max HOM05D003138 ORTHO05D003789 4.5e-44 181.8 159 61.0
Nitab4.5_0000142g0190 Nicotiana tabacum HOM05D003138 ORTHO05D003789 4.5e-44 181.8 154 63.0
arahy.Tifrunner.gnm1.ann1.U6I4YS Arachis hypogaea HOM05D003138 ORTHO05D003789 5.9e-44 181.4 165 60.6
Lj2g0010709 Lotus japonicus HOM05D003138 ORTHO05D003789 7.7e-44 181.0 163 57.1
Prupe.6G219600 Prunus persica HOM05D003138 ORTHO05D003789 7.7e-44 181.0 161 62.1
SalBow5G3758 Salvia bowleyana HOM05D003138 ORTHO05D003789 7.7e-44 181.0 195 54.9
SalBow5G4243 Salvia bowleyana HOM05D003138 ORTHO05D003789 7.7e-44 181.0 195 54.9
Thecc.01G073500 Theobroma cacao HOM05D003138 ORTHO05D003789 7.7e-44 181.0 161 58.4
COL.COLO4_11585 Corchorus olitorius HOM05D003138 ORTHO05D003789 1.0e-43 180.6 161 59.0
Ca_24681_v3 Cicer arietinum L. HOM05D003138 ORTHO05D003789 1.3e-43 180.3 160 60.0
unitig_748.g8590 Utricularia gibba HOM05D003138 ORTHO05D003789 1.7e-43 179.9 161 59.0
CANSAT01G2723 Cannabis sativa HOM05D003138 ORTHO05D003789 2.3e-43 179.5 158 61.4
Actinidia16425 Actinidia chinensis HOM05D003138 ORTHO05D003789 2.9e-43 179.1 159 61.0
Dinv04041 Davidia involucrata HOM05D003138 ORTHO05D003789 2.9e-43 179.1 156 62.8
FAN28G0014 Fragaria x ananassa HOM05D003138 ORTHO05D003789 2.9e-43 179.1 159 61.6
Phvul.003G234400 Phaseolus vulgaris HOM05D003138 ORTHO05D003789 2.9e-43 179.1 156 62.2
Potri.007G005300 Populus trichocarpa HOM05D003138 ORTHO05D003789 3.8e-43 178.7 161 59.6
RcHm_v2.0_Chr1g0384171 Rosa chinensis HOM05D003138 ORTHO05D003789 3.8e-43 178.7 159 61.0
RcHm_v2.0_Chr2g0108261 Rosa chinensis HOM05D003138 ORTHO05D003789 3.8e-43 178.7 159 61.0
VMungo0251G0938 Vigna mungo HOM05D003138 ORTHO05D003789 3.8e-43 178.7 156 61.5
FvH4_1g17820 Fragaria vesca HOM05D003138 ORTHO05D003789 5.0e-43 178.3 159 61.6
FAN19G1177 Fragaria x ananassa HOM05D003138 ORTHO05D003789 5.0e-43 178.3 159 61.6
Glyma.01G194700 Glycine max HOM05D003138 ORTHO05D003789 5.0e-43 178.3 156 62.2
Hma1.2p1_0852F.1_g228610 Hydrangea macrophylla HOM05D003138 ORTHO05D003789 5.0e-43 178.3 156 61.5
Potri.014G005000 Populus trichocarpa HOM05D003138 ORTHO05D003789 5.0e-43 178.3 161 59.6
Hma1.2p1_0808F.1_g221660 Hydrangea macrophylla HOM05D003138 ORTHO05D003789 6.6e-43 177.9 156 62.2
TAR381G0750 Trochodendron aralioides HOM05D003138 ORTHO05D003789 6.6e-43 177.9 159 61.6
TAR381G1576 Trochodendron aralioides HOM05D003138 ORTHO05D003789 6.6e-43 177.9 159 61.6
CAN.G278.17 Capsicum annuum HOM05D003138 ORTHO05D003789 8.6e-43 177.6 159 59.7
AUR62004014 Chenopodium quinoa HOM05D003138 ORTHO05D003789 8.6e-43 177.6 156 60.3
Migut.H00341 Erythranthe guttata HOM05D003138 ORTHO05D003789 8.6e-43 177.6 159 58.5
Lj7A107G21 Lonicera japonica HOM05D003138 ORTHO05D003789 8.6e-43 177.6 156 60.3
VMungo1215G1848 Vigna mungo HOM05D003138 ORTHO05D003789 8.6e-43 177.6 156 60.3
Thhalv10000095m.g Eutrema salsugineum HOM05D003138 ORTHO05D003789 1.1e-42 177.2 151 64.2
Hund13955 Selenicereus undatus HOM05D003138 ORTHO05D003789 1.1e-42 177.2 159 59.1
MELO3C007642.2 Cucumis melo HOM05D003138 ORTHO05D003789 1.5e-42 176.8 156 60.9
Ah.03g140580 Amaranthus hybridus HOM05D003138 ORTHO05D003789 1.9e-42 176.4 156 59.6
Glyma.11G047200 Glycine max HOM05D003138 ORTHO05D003789 1.9e-42 176.4 156 60.9
Gorai.007G224300 Gossypium raimondii HOM05D003138 ORTHO05D003789 1.9e-42 176.4 156 60.9
Sed0018224 Sechium edule HOM05D003138 ORTHO05D003789 2.5e-42 176.0 156 60.3
Aa31LG7G13900 Aethionema arabicum HOM05D003138 ORTHO05D003789 3.3e-42 175.6 156 60.9
Lj4g0008440 Lotus japonicus HOM05D003138 ORTHO05D003789 3.3e-42 175.6 159 59.7
GSVIVG01002386001 Vitis vinifera HOM05D003138 ORTHO05D003789 3.3e-42 175.6 156 59.6
ClCG01G017650 Citrullus lanatus HOM05D003138 ORTHO05D003789 4.2e-42 175.3 183 55.7
Duzib264G1098 Durio zibethinus HOM05D003138 ORTHO05D003789 4.2e-42 175.3 161 57.8
Psat2g171720 Pisum sativum HOM05D003138 ORTHO05D003789 4.2e-42 175.3 160 57.5
Nn5g30613 Nelumbo nucifera HOM05D003138 ORTHO05D003789 5.6e-42 174.9 159 61.6
Phvul.002G010200 Phaseolus vulgaris HOM05D003138 ORTHO05D003789 5.6e-42 174.9 156 60.3
CsaV3_6G044190 Cucumis sativus L. HOM05D003138 ORTHO05D003789 7.2e-42 174.5 156 60.3
Gohir.A10G089500 Gossypium hirsutum HOM05D003138 ORTHO05D003789 7.2e-42 174.5 161 59.0
Gorai.011G108300 Gossypium raimondii HOM05D003138 ORTHO05D003789 7.2e-42 174.5 161 59.0
MD02G1187100 Malus domestica HOM05D003138 ORTHO05D003789 1.2e-41 173.7 159 60.4
Gohir.D10G098600 Gossypium hirsutum HOM05D003138 ORTHO05D003789 1.6e-41 173.3 161 59.0
Medtr5g015300 Medicago truncatula HOM05D003138 ORTHO05D003789 2.1e-41 172.9 160 57.5
ATR0739G017 Amborella trichopoda HOM05D003138 ORTHO05D003789 2.8e-41 172.6 159 59.1
PSO675G5167 Papaver somniferum HOM05D003138 ORTHO05D003789 3.6e-41 172.2 161 59.6
Sed0009166 Sechium edule HOM05D003138 ORTHO05D003789 8.0e-41 171.0 156 59.0
Aa31LG6G14570 Aethionema arabicum HOM05D003138 ORTHO05D003789 1.0e-40 170.6 157 59.9
Oeu014252.1 Olea europaea HOM05D003138 ORTHO05D003789 1.0e-40 170.6 231 46.3
MD15G1298200 Malus domestica HOM05D003138 ORTHO05D003789 1.4e-40 170.2 159 59.7
PSO541G1195 Papaver somniferum HOM05D003138 ORTHO05D003789 1.4e-40 170.2 161 59.0
Aqoxy6G02588 Aquilegia oxysepala HOM05D003138 ORTHO05D003789 2.3e-40 169.5 155 60.0
PGR004G0610 Punica granatum HOM05D003138 ORTHO05D003789 2.3e-40 169.5 159 57.9
HPP92_018181 Vanilla planifolia HOM05D003138 ORTHO05D003789 6.8e-40 167.9 163 55.8
Aqoxy35s001 Aquilegia oxysepala HOM05D003138 ORTHO05D003789 1.5e-39 166.8 155 59.4
CiPaw.01G003700 Carya illinoinensis HOM05D003138 ORTHO05D003789 1.5e-39 166.8 161 57.8
Gohir.A11G214300 Gossypium hirsutum HOM05D003138 ORTHO05D003789 4.9e-38 161.8 176 52.8
CDE07G0037 Ceratophyllum demersum HOM05D003138 ORTHO05D003789 1.8e-37 159.8 159 54.1
Os07g0585600 Oryza sativa ssp. japonica HOM05D003138 ORTHO05D003789 5.4e-37 158.3 163 54.0
BcaNung02078 Brassica carinata HOM05D003138 ORTHO05D003789 5.9e-36 154.8 145 59.3
Os03g0431200 Oryza sativa ssp. japonica HOM05D003138 ORTHO05D003789 1.0e-35 154.1 149 56.4
Gohir.D11G209100 Gossypium hirsutum HOM05D003138 ORTHO05D003789 1.3e-35 153.7 179 50.8
Zm00001eb404710 Zea mays HOM05D003138 ORTHO05D003789 2.5e-34 149.4 149 56.4
Pp3c2_3880 Physcomitrium patens HOM05D003138 ORTHO05D003789 1.2e-31 140.6 149 49.0
Cpa.g.sc6.8 Carica papaya HOM05D003138 ORTHO05D003789 5.8e-31 138.3 79 86.1
Peaxi162Scf00118g01810 Petunia axillaris HOM05D003138 ORTHO05D003789 1.3e-30 137.1 159 50.3
SMO298G0018 Selaginella moellendorffii HOM05D003138 ORTHO05D003789 1.7e-30 136.7 153 48.4
Oeu013326.4 Olea europaea HOM05D003138 ORTHO05D003789 2.9e-30 136.0 216 44.0
FAN26G0633 Fragaria x ananassa HOM05D003138 ORTHO05D003789 1.4e-29 133.7 79 83.5
RhsimUnG0137900 Rhododendron simsii HOM05D003138 ORTHO05D003789 1.4e-29 133.7 140 55.0
Mapoly0138s0041 Marchantia polymorpha HOM05D003138 ORTHO05D003789 1.9e-29 133.3 163 46.0
Hund16404 Selenicereus undatus HOM05D003138 ORTHO05D003789 5.4e-29 131.7 158 48.1
FAN06G0169 Fragaria x ananassa HOM05D003138 ORTHO05D003789 1.6e-28 130.2 151 53.0
AagrBONN_evm.TU.Sc2ySwM_368.2478 Anthoceros agrestis HOM05D003138 ORTHO05D003789 2.0e-28 129.8 156 46.8
CBR_g45391 Chara braunii HOM05D003138 ORTHO05D003789 1.0e-27 127.5 162 45.7
Mapoly0147s0030 Marchantia polymorpha HOM05D003138 ORTHO05D003789 1.3e-27 127.1 146 45.2
Nitab4.5_0013633g0020 Nicotiana tabacum HOM05D003138 ORTHO05D003789 1.1e-26 124.0 159 46.5
SMO119G0424 Selaginella moellendorffii HOM05D003138 ORTHO05D003789 7.3e-26 121.3 146 44.5
SMO163G0034 Selaginella moellendorffii HOM05D003138 ORTHO05D003789 7.3e-26 121.3 146 44.5
ECA232G0816 Erigeron canadensis HOM05D003138 ORTHO05D003789 2.3e-24 116.3 97 62.9
Zm00001eb325850 Zea mays HOM05D003138 ORTHO05D003789 8.9e-24 114.4 78 74.4
CDE04G0724 Ceratophyllum demersum HOM05D003138 ORTHO05D003789 1.3e-22 110.5 125 48.8
Pp3c10_11390 Physcomitrium patens HOM05D003138 ORTHO05D003789 1.7e-22 110.2 127 48.8
CARHR114220 Cardamine hirsuta HOM05D003138 ORTHO05D003789 4.9e-22 108.6 81 71.6
Prupe.1G259000 Prunus persica HOM05D003138 ORTHO05D003789 3.5e-20 102.4 135 48.1
SHI29452 Sapria himalayana HOM05D003138 ORTHO05D003789 6.2e-17 91.7 142 41.5
PGR102G1221 Punica granatum HOM05D003138 ORTHO05D003789 1.1e-16 90.9 54 81.5
Thhalv10024840m.g Eutrema salsugineum HOM05D003138 ORTHO05D003789 2.3e-16 89.7 54 79.6
FvH4_7g16532 Fragaria vesca HOM05D003138 ORTHO05D003789 3.1e-16 89.4 75 66.7
TPR.G21854 Trifolium pratense HOM05D003138 ORTHO05D003789 3.1e-16 89.4 54 77.8
ECA232G2300 Erigeron canadensis HOM05D003138 ORTHO05D003789 1.5e-15 87.0 97 49.5
TPR.G36111 Trifolium pratense HOM05D003138 ORTHO05D003789 1.5e-15 87.0 104 47.1
CAN.G186.25 Capsicum annuum HOM05D003138 ORTHO05D003789 2.9e-14 82.8 59 66.1
SEGI_03546 Sequoiadendron giganteum HOM05D003138 ORTHO05D003789 8.4e-14 81.3 54 70.4
CAN.G99.5 Capsicum annuum HOM05D003138 ORTHO05D003418 1.1e-13 80.9 60 63.3
Lj7A106T18 Lonicera japonica HOM05D003138 ORTHO05D003789 1.4e-13 80.5 148 38.5
PRCOL_00005931 Prasinoderma coloniale HOM05D003138 ORTHO05D003789 4.1e-13 79.0 148 35.1
TAR376G1027 Trochodendron aralioides HOM05D008657 ORTHO05D010869 1.2e-12 77.4 100 48.0
MCO14G281 Micromonas commoda HOM05D003138 ORTHO05D003789 1.6e-12 77.0 72 51.4
Cre02.g144800 Chlamydomonas reinhardtii HOM05D003138 ORTHO05D003789 3.9e-11 72.4 153 35.3
Sabra14G0000500 Salix brachista HOM05D003138 ORTHO05D003789 2.5e-10 69.7 40 82.5
Rhsim09G0021600 Rhododendron simsii HOM05D003138 ORTHO05D003789 6.2e-09 65.1 143 32.9
AL2G12800 Arabidopsis lyrata HOM05D003138 ORTHO05D003789 5.2e-08 62.0 47 63.8


User provided reference genes

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