Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G1388 Salvia bowleyana HOM05D002977 ORTHO05D003225 1.1e-198 696.4 348 100.0
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 5.1e-55 219.2 405 42.5
SGA_v2.0_scaffold153G37063 Striga asiatica HOM05D002977 ORTHO05D003225 2.4e-52 210.3 383 41.5
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 1.9e-49 200.7 400 40.8
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 9.0e-44 181.8 391 36.3
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 1.5e-43 181.0 391 37.3
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 1.5e-43 181.0 392 36.0
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 1.9e-41 174.1 389 36.2
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 2.3e-39 167.2 408 35.3
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.5e-38 164.5 369 36.9
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 2.8e-37 160.2 421 34.2
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 8.2e-37 158.7 443 35.4
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 1.3e-34 151.4 354 35.9
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 6.5e-34 149.1 354 35.3
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.1e-33 148.3 382 35.1
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 2.5e-33 147.1 386 35.8
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 5.5e-33 146.0 358 34.1
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 5.5e-33 146.0 395 34.4
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 3.0e-31 140.2 380 33.2
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 5.1e-31 139.4 399 33.1
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 5.7e-30 136.0 407 32.9
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 7.4e-30 135.6 436 31.4
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 6.3e-29 132.5 424 29.5
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 8.2e-29 132.1 369 35.5
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 1.1e-28 131.7 369 35.5
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 4.5e-27 126.3 412 31.3
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 4.5e-27 126.3 455 27.7
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 5.9e-27 125.9 477 28.1
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 7.7e-27 125.6 471 29.5
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 1.0e-26 125.2 428 29.0
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 5.0e-26 122.9 355 32.4
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.9e-25 120.9 469 27.9
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 4.2e-25 119.8 416 28.4
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 4.7e-24 116.3 459 27.2
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 7.9e-24 115.5 428 28.7
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 7.9e-24 115.5 424 28.8
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 1.4e-23 114.8 410 28.8
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.3e-23 114.0 426 29.1
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 2.3e-23 114.0 418 30.9
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 3.9e-23 113.2 423 26.5
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 3.9e-23 113.2 476 26.9
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 5.2e-23 112.8 427 28.8
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 8.8e-23 112.1 432 27.5
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 2.0e-22 110.9 430 27.9
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.7e-21 107.8 497 27.6
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 2.2e-21 107.5 442 26.7
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 3.7e-21 106.7 448 27.7
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 6.3e-21 105.9 396 31.1
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 8.2e-21 105.5 439 28.5
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 1.1e-20 105.1 422 27.0
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 1.8e-20 104.4 437 29.5
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 2.4e-20 104.0 449 28.1
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 3.1e-20 103.6 441 26.8
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 3.1e-20 103.6 412 28.6
MBI12_g11809_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 7.0e-20 102.4 445 27.6
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.2e-19 101.7 396 30.3
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 2.6e-19 100.5 445 27.4
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 2.6e-19 100.5 284 29.9
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 5.9e-19 99.4 349 27.5
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 7.7e-19 99.0 398 31.2
Nn1g01342 Nelumbo nucifera HOM05D002977 ORTHO05D003225 1.0e-18 98.6 488 26.8
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 1.3e-18 98.2 444 27.5
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 2.2e-18 97.4 429 27.0
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 5.0e-18 96.3 333 28.5
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 2.5e-17 94.0 218 32.6
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 4.2e-17 93.2 415 27.0
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 4.2e-17 93.2 410 27.3
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 5.5e-17 92.8 472 25.8
ECA236G0338 Erigeron canadensis HOM05D002977 ORTHO05D003225 6.1e-16 89.4 319 29.5
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 8.0e-16 89.0 423 27.7
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 1.8e-15 87.8 337 32.3
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 3.0e-15 87.0 293 28.0
Psat4g151680 Pisum sativum HOM05D002977 ORTHO05D003225 3.0e-15 87.0 433 27.0
Dinv37695 Davidia involucrata HOM05D002977 ORTHO05D003225 1.5e-14 84.7 446 24.9
Lj3g0026127 Lotus japonicus HOM05D002977 ORTHO05D003225 9.7e-14 82.0 435 24.4
Haze_08955 Corylus avellana HOM05D002977 ORTHO05D003225 1.3e-13 81.6 454 25.8
Cc08_g13950 Coffea canephora HOM05D002977 ORTHO05D003225 6.3e-13 79.3 98 39.8
arahy.Tifrunner.gnm1.ann1.YQQF81 Arachis hypogaea HOM05D002977 ORTHO05D003225 8.2e-13 79.0 356 24.7
EL10Ac1g00967 Beta vulgaris HOM05D002977 ORTHO05D003225 1.1e-12 78.6 344 29.9
Manes.01G067700 Manihot esculenta HOM05D002977 ORTHO05D003225 1.1e-12 78.6 476 24.6
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 1.1e-12 78.6 381 26.2
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 1.8e-12 77.8 229 30.1
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 1.8e-12 77.8 291 28.2
Ah.16g108930 Amaranthus hybridus HOM05D002977 ORTHO05D003225 5.3e-12 76.3 374 28.3
RcHm_v2.0_Chr7g0199421 Rosa chinensis HOM05D002977 ORTHO05D003225 1.2e-11 75.1 496 24.0
arahy.Tifrunner.gnm1.ann1.XNH79U Arachis hypogaea HOM05D002977 ORTHO05D003225 2.0e-11 74.3 357 24.1
DCAR_006762 Daucus carota HOM05D002977 ORTHO05D003225 5.9e-11 72.8 98 34.7
FvH4_5g01430 Fragaria vesca HOM05D002977 ORTHO05D003225 5.9e-11 72.8 417 24.7
Thecc.03G270800 Theobroma cacao HOM05D002977 ORTHO05D003225 7.7e-11 72.4 488 24.2
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 1.0e-10 72.0 449 27.2
Hma1.2p1_0371F.1_g138190 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 1.0e-10 72.0 101 39.6
COL.COLO4_05272 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.7e-10 71.2 218 28.9
Sabra01G0084500 Salix brachista HOM05D002977 ORTHO05D003225 6.5e-10 69.3 460 24.3
Eucgr.E00527 Eucalyptus grandis HOM05D002977 ORTHO05D003225 8.5e-10 68.9 123 38.2
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 1.9e-09 67.8 339 28.0
Potri.003G121100 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.5e-09 67.4 157 30.6
Cfa012096 Carpinus fangiana HOM05D002524 ORTHO05D002718 3.2e-09 67.0 204 28.9
Migut.E01299 Erythranthe guttata HOM05D002977 ORTHO05D003225 3.2e-09 67.0 309 27.5
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 4.2e-09 66.6 413 25.9
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 4.2e-09 66.6 405 24.9
FAN04G2551 Fragaria x ananassa HOM05D002524 ORTHO05D002718 4.2e-09 66.6 418 23.9
Sabra03G0085100 Salix brachista HOM05D002977 ORTHO05D003225 4.2e-09 66.6 475 23.8
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 5.5e-09 66.2 372 28.0
Duzib205G0359 Durio zibethinus HOM05D002977 ORTHO05D003225 9.4e-09 65.5 100 40.0
Potri.001G110900 Populus trichocarpa HOM05D002977 ORTHO05D003225 9.4e-09 65.5 227 26.9
Atru.chr9.1537 Acer truncatum HOM05D002977 ORTHO05D003225 1.2e-08 65.1 210 28.6
Gohir.D08G197000 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.2e-08 65.1 211 27.5
Gorai.004G207700 Gossypium raimondii HOM05D002977 ORTHO05D003225 1.2e-08 65.1 211 27.5
Gohir.A08G178500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 1.6e-08 64.7 211 28.0
CsaV3_5G003260 Cucumis sativus L. HOM05D002977 ORTHO05D003225 2.1e-08 64.3 232 27.6
FAN18G2499 Fragaria x ananassa HOM05D002524 ORTHO05D002718 2.1e-08 64.3 211 27.0
FAN13G0210 Fragaria x ananassa HOM05D002524 ORTHO05D002718 3.6e-08 63.5 434 23.5
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 4.7e-08 63.2 451 25.5
QL12p017099 Quercus lobata HOM05D002977 ORTHO05D003225 6.1e-08 62.8 122 33.6
Duzib084G1184 Durio zibethinus HOM05D002977 ORTHO05D003225 8.0e-08 62.4 479 24.0
Manes.02G027900 Manihot esculenta HOM05D002977 ORTHO05D003225 8.0e-08 62.4 238 25.2
arahy.Tifrunner.gnm1.ann1.ELA92E Arachis hypogaea HOM05D002977 ORTHO05D003225 1.4e-07 61.6 217 27.2
MELO3C005628.2 Cucumis melo HOM05D002977 ORTHO05D003225 1.4e-07 61.6 205 27.8
ECA233G2885 Erigeron canadensis HOM05D002977 ORTHO05D003225 1.4e-07 61.6 203 27.6
Actinidia02049 Actinidia chinensis HOM05D002977 ORTHO05D003225 1.8e-07 61.2 241 24.5
SGA_v2.0_scaffold196G40889 Striga asiatica HOM05D002977 ORTHO05D003225 2.3e-07 60.8 452 23.7
TWI81G0253 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 2.3e-07 60.8 201 28.4
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 4.0e-07 60.1 205 29.8
CiPaw.11G141500 Carya illinoinensis HOM05D002977 ORTHO05D003225 6.8e-07 59.3 477 22.6
ClCG01G003130 Citrullus lanatus HOM05D002977 ORTHO05D003225 6.8e-07 59.3 203 27.1
Psat4g067560 Pisum sativum HOM05D002977 ORTHO05D003225 6.8e-07 59.3 421 22.8
CANSAT21G2154 Cannabis sativa HOM05D002977 ORTHO05D003225 1.5e-06 58.2 214 26.6
AUR62010660 Chenopodium quinoa HOM05D002977 ORTHO05D003225 1.5e-06 58.2 166 30.1
Peaxi162Scf00714g00621 Petunia axillaris HOM05D002977 ORTHO05D003225 1.5e-06 58.2 101 33.7
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 2.6e-06 57.4 374 26.2
Prupe.5G089800 Prunus persica HOM05D002977 ORTHO05D003225 2.6e-06 57.4 169 29.6
Nitab4.5_0011100g0010 Nicotiana tabacum HOM05D002977 ORTHO05D003225 3.4e-06 57.0 102 31.4
CiPaw.12G098800 Carya illinoinensis HOM05D002977 ORTHO05D003225 4.4e-06 56.6 489 24.1
arahy.Tifrunner.gnm1.ann1.BQI3IB Arachis hypogaea HOM05D002977 ORTHO05D003225 7.5e-06 55.8 218 26.1
Sopen08g028630 Solanum pennellii HOM05D002977 ORTHO05D003225 7.5e-06 55.8 96 33.3


User provided reference genes

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