Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 7.8e-86 320.9 217 100.0
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 4.5e-33 145.6 209 47.4
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 1.1e-28 131.0 262 46.6
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 5.7e-28 128.6 223 42.2
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 7.4e-28 128.3 218 44.0
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 6.3e-27 125.2 230 49.1
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 6.3e-27 125.2 221 42.1
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 1.4e-26 124.0 249 41.0
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 6.9e-26 121.7 217 40.1
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 6.9e-26 121.7 227 41.9
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 2.0e-25 120.2 238 40.3
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 1.0e-24 117.9 202 62.9
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 5.0e-24 115.5 252 37.7
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 4.2e-23 112.5 241 40.7
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 7.2e-23 111.7 250 36.4
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 2.1e-22 110.2 246 37.0
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 2.7e-22 109.8 246 37.0
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 2.7e-22 109.8 246 37.0
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.6e-22 109.4 221 38.5
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 4.6e-22 109.0 239 37.7
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 8.7e-21 104.8 209 44.5
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 5.7e-20 102.1 233 37.3
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 2.2e-19 100.1 249 33.3
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.8e-19 99.8 219 38.4
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 2.8e-19 99.8 204 53.9
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 2.4e-18 96.7 208 38.9
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 3.1e-18 96.3 209 39.2
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 4.1e-18 95.9 204 38.2
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 5.3e-18 95.5 214 38.8
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 6.9e-18 95.1 91 59.3
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 6.9e-18 95.1 237 33.8
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 9.1e-18 94.7 237 39.7
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 3.4e-17 92.8 216 35.6
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 3.4e-17 92.8 213 35.7
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 1.3e-16 90.9 204 39.2
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 2.2e-16 90.1 220 35.9
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.2e-16 90.1 200 40.5
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 2.9e-16 89.7 216 35.2
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 1.1e-15 87.8 227 33.9
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 1.9e-15 87.0 218 34.9
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 3.2e-15 86.3 245 36.7
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 5.5e-15 85.5 205 38.0
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 7.2e-15 85.1 259 33.2
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 1.2e-14 84.3 221 34.4
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 2.1e-14 83.6 185 36.8
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 2.7e-14 83.2 235 33.6
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 4.6e-14 82.4 223 37.2
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 4.6e-14 82.4 256 32.0
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 6.1e-14 82.0 259 32.8
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 6.1e-14 82.0 223 39.0
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 1.0e-13 81.3 202 39.6
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 1.4e-13 80.9 213 37.6
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 1.8e-13 80.5 239 33.1
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 1.8e-13 80.5 89 53.9
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 2.3e-13 80.1 84 59.5
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 6.7e-13 78.6 231 34.2
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 1.1e-12 77.8 199 32.7
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 1.5e-12 77.4 203 52.2
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 1.5e-12 77.4 250 31.6
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 2.6e-12 76.6 207 38.6
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 3.3e-12 76.3 263 36.1
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 4.4e-12 75.9 216 33.3
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 7.4e-12 75.1 207 33.8
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 9.7e-12 74.7 97 52.6
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 9.7e-12 74.7 108 45.4
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 1.7e-11 73.9 98 51.0
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 2.8e-11 73.2 106 47.2
FAN05G5322 Fragaria x ananassa HOM05D007616 ORTHO05D008751 3.4e-09 66.2 92 45.7
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 4.5e-09 65.9 250 32.8
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 7.7e-09 65.1 226 44.2
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 7.7e-09 65.1 291 29.6
unitig_21.g20913 Utricularia gibba HOM05D007616 ORTHO05D008751 1.3e-08 64.3 181 30.4
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 1.1e-07 61.2 247 29.1
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 1.4e-07 60.8 222 29.7
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 1.9e-07 60.5 209 37.3
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 1.9e-07 60.5 243 28.8
Psat2g154760 Pisum sativum HOM05D002661 ORTHO05D002786 1.9e-07 60.5 211 33.2
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 2.5e-07 60.1 47 63.8
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 5.5e-07 58.9 224 43.8
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.2e-06 57.8 202 32.7
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 2.7e-06 56.6 125 38.4
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 2.7e-06 56.6 100 44.0
Peaxi162Scf00034g02717 Petunia axillaris HOM05D002661 ORTHO05D002786 4.7e-06 55.8 89 40.4
Prupe.7G167800 Prunus persica HOM05D002668 ORTHO05D003295 4.7e-06 55.8 84 41.7
THA.LOC104807494 Tarenaya hassleriana HOM05D002661 ORTHO05D002786 4.7e-06 55.8 111 34.2


User provided reference genes

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