Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G1193 Salvia bowleyana HOM05D003676 ORTHO05D004262 1.1e-154 550.1 313 100.0
MSTRG.2714 Avicennia marina HOM05D003676 ORTHO05D004262 1.1e-77 294.3 342 62.6
Cc07_g10720 Coffea canephora HOM05D003676 ORTHO05D004262 3.2e-72 276.2 341 53.7
Dinv40087 Davidia involucrata HOM05D003676 ORTHO05D004262 3.5e-71 272.7 350 53.4
Lj2A468T73 Lonicera japonica HOM05D003676 ORTHO05D004262 2.3e-70 270.0 347 56.5
QL06p032755 Quercus lobata HOM05D003676 ORTHO05D004262 4.3e-69 265.8 340 58.2
Sabra05G0093400 Salix brachista HOM05D003676 ORTHO05D004262 3.6e-68 262.7 349 53.6
Hma1.2p1_0258F.1_g104145 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 6.2e-68 261.9 350 54.9
Potri.005G114100 Populus trichocarpa HOM05D003676 ORTHO05D004262 4.0e-67 259.2 350 56.0
Oeu063192.2 Olea europaea HOM05D003676 ORTHO05D004262 1.5e-66 257.3 346 52.0
Dinv33627 Davidia involucrata HOM05D003676 ORTHO05D004262 9.9e-66 254.6 336 51.8
CSS0022685 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 2.4e-64 250.0 340 52.6
Manes.01G145700 Manihot esculenta HOM05D003676 ORTHO05D004262 4.1e-64 249.2 330 55.8
CSS0021991 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 5.4e-64 248.8 340 53.2
Hma1.2p1_0956F.1_g241320 Hydrangea macrophylla HOM05D003676 ORTHO05D004262 7.1e-64 248.4 374 52.1
Solyc02g083890.4 Solanum lycopersicum HOM05D003676 ORTHO05D004262 1.2e-63 247.7 331 52.3
Sopen02g028680 Solanum pennellii HOM05D003676 ORTHO05D004262 1.6e-63 247.3 336 51.8
CiPaw.07G058500 Carya illinoinensis HOM05D003676 ORTHO05D004262 3.5e-63 246.1 347 54.8
DCAR_016607 Daucus carota HOM05D003676 ORTHO05D004262 1.0e-62 244.6 334 55.1
Oeu012589.1 Olea europaea HOM05D003676 ORTHO05D004262 1.0e-62 244.6 344 47.7
TAR628G0168 Trochodendron aralioides HOM05D003676 ORTHO05D004262 1.0e-62 244.6 328 56.1
Oeu048461.1 Olea europaea HOM05D003676 ORTHO05D004262 1.3e-62 244.2 338 55.6
CSS0018215 Camellia sinensis var. sinensis HOM05D003676 ORTHO05D004262 6.6e-62 241.9 345 55.9
Nitab4.5_0005660g0010 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.5e-61 240.7 335 55.8
RcHm_v2.0_Chr2g0099451 Rosa chinensis HOM05D003676 ORTHO05D004262 1.9e-61 240.4 359 48.2
unitig_736.g22721 Utricularia gibba HOM05D003676 ORTHO05D004262 3.3e-61 239.6 326 51.5
Duzib187G0981 Durio zibethinus HOM05D003676 ORTHO05D004262 7.3e-61 238.4 346 52.6
Manes.02G104500 Manihot esculenta HOM05D003676 ORTHO05D004262 1.2e-60 237.7 340 51.8
Nitab4.5_0003382g0020 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.6e-60 237.3 331 53.5
TAR381G0332 Trochodendron aralioides HOM05D003676 ORTHO05D004262 6.2e-60 235.3 340 54.4
Cfa006972 Carpinus fangiana HOM05D003676 ORTHO05D004262 1.1e-59 234.6 330 56.1
MD15G1246000 Malus domestica HOM05D003676 ORTHO05D004262 1.8e-59 233.8 348 50.9
Prupe.7G168100 Prunus persica HOM05D003676 ORTHO05D004262 1.8e-59 233.8 360 51.7
Nn5g30150 Nelumbo nucifera HOM05D003676 ORTHO05D004262 4.0e-59 232.6 357 47.9
Peaxi162Scf00083g00320 Petunia axillaris HOM05D003676 ORTHO05D004262 4.0e-59 232.6 344 53.5
Cpa.g.sc6.251 Carica papaya HOM05D003676 ORTHO05D004262 6.8e-59 231.9 335 53.4
PGSC0003DMG400003640 Solanum tuberosum HOM05D003676 ORTHO05D004262 6.8e-59 231.9 330 49.4
Thecc.01G019000 Theobroma cacao HOM05D003676 ORTHO05D004262 6.8e-59 231.9 349 50.7
Ciclev10025949m.g Citrus clementina HOM05D003676 ORTHO05D004262 1.5e-58 230.7 337 50.4
Lj4g0000664 Lotus japonicus HOM05D003676 ORTHO05D004262 2.0e-58 230.3 325 49.8
arahy.Tifrunner.gnm1.ann1.3LB61T Arachis hypogaea HOM05D003676 ORTHO05D004262 3.4e-58 229.6 328 53.4
Atru.chr3.798 Acer truncatum HOM05D003676 ORTHO05D004262 4.4e-58 229.2 356 50.3
MD02G1132500 Malus domestica HOM05D003676 ORTHO05D004262 4.4e-58 229.2 347 46.7
arahy.Tifrunner.gnm1.ann1.CCI0LY Arachis hypogaea HOM05D003676 ORTHO05D004262 1.7e-57 227.3 328 53.0
Lalb_Chr05g0212401 Lupinus albus HOM05D003676 ORTHO05D004262 2.9e-57 226.5 334 50.3
ClCG10G000750 Citrullus lanatus HOM05D003676 ORTHO05D004262 3.8e-57 226.1 339 52.2
CAN.G1671.14 Capsicum annuum HOM05D003676 ORTHO05D004262 1.4e-56 224.2 343 50.1
CsaV3_3G000800 Cucumis sativus L. HOM05D003676 ORTHO05D004262 1.9e-56 223.8 343 52.5
FAN23G0443 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.9e-56 223.8 341 51.0
Eucgr.I02350 Eucalyptus grandis HOM05D003676 ORTHO05D004262 5.4e-56 222.2 345 50.4
vmacro18414 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 5.4e-56 222.2 343 48.4
MELO3C013767.2 Cucumis melo HOM05D003676 ORTHO05D004262 2.1e-55 220.3 348 53.2
FAN26G1220 Fragaria x ananassa HOM05D003676 ORTHO05D004262 2.7e-55 219.9 341 48.7
TAR376G0994 Trochodendron aralioides HOM05D003676 ORTHO05D004262 4.6e-55 219.2 340 49.4
AUR62029464 Chenopodium quinoa HOM05D003676 ORTHO05D004262 6.0e-55 218.8 325 47.4
Gohir.D12G060000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.0e-54 218.0 320 53.4
FAN19G1818 Fragaria x ananassa HOM05D003676 ORTHO05D004262 1.3e-54 217.6 359 47.9
Gorai.008G063100 Gossypium raimondii HOM05D003676 ORTHO05D004262 1.7e-54 217.2 320 51.9
Actinidia17444 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.0e-54 216.5 335 47.2
TWI09G1351 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 3.0e-54 216.5 359 49.6
FvH4_1g11840 Fragaria vesca HOM05D003676 ORTHO05D004262 3.9e-54 216.1 362 48.6
Aa31LG1G14730 Aethionema arabicum HOM05D003676 ORTHO05D004262 1.5e-53 214.2 325 47.7
MBI05_g37447_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.5e-53 214.2 333 48.0
CANSAT01G0038 Cannabis sativa HOM05D003676 ORTHO05D004262 1.9e-53 213.8 335 48.4
Sed0017342 Sechium edule HOM05D003676 ORTHO05D004262 1.9e-53 213.8 335 49.9
Hund14045 Selenicereus undatus HOM05D003676 ORTHO05D004262 5.6e-53 212.2 335 48.1
Medtr8g075950 Medicago truncatula HOM05D003676 ORTHO05D004262 1.2e-52 211.1 328 51.5
Nn1g05889 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.2e-52 211.1 321 54.2
Hund16490 Selenicereus undatus HOM05D003676 ORTHO05D004262 1.6e-52 210.7 352 45.7
Rhsim10G0212200 Rhododendron simsii HOM05D003676 ORTHO05D004262 2.1e-52 210.3 342 52.6
Gohir.A12G059600 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.6e-52 209.5 321 52.0
Psat4g099080 Pisum sativum HOM05D003676 ORTHO05D004262 3.6e-52 209.5 341 44.9
Duzib264G0036 Durio zibethinus HOM05D003676 ORTHO05D004262 4.7e-52 209.1 342 46.8
Gohir.A11G175400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.8e-51 207.2 322 47.2
PSO675G7127 Papaver somniferum HOM05D003676 ORTHO05D004262 1.8e-51 207.2 341 46.6
VMungo0251G0225 Vigna mungo HOM05D003676 ORTHO05D004262 2.4e-51 206.8 338 53.0
Rhsim08G0033700 Rhododendron simsii HOM05D003676 ORTHO05D004262 4.0e-51 206.1 346 50.0
PSO541G5658 Papaver somniferum HOM05D003676 ORTHO05D004262 9.0e-51 204.9 347 45.8
CARHR281500 Cardamine hirsuta HOM05D003676 ORTHO05D004262 1.2e-50 204.5 332 49.1
Glyma.16G128800 Glycine max HOM05D003676 ORTHO05D004262 1.3e-49 201.1 331 48.0
Potri.007G057800 Populus trichocarpa HOM05D003676 ORTHO05D004262 1.3e-49 201.1 335 49.6
PGR119G1864 Punica granatum HOM05D003676 ORTHO05D004262 1.3e-49 201.1 354 48.3
TPR.G30058 Trifolium pratense HOM05D003676 ORTHO05D004262 1.7e-49 200.7 328 47.6
unitig_899.g14713 Utricularia gibba HOM05D003676 ORTHO05D004262 2.2e-49 200.3 281 47.7
AUR62003369 Chenopodium quinoa HOM05D003676 ORTHO05D004262 2.9e-49 199.9 322 46.6
Actinidia30997 Actinidia chinensis HOM05D003676 ORTHO05D004262 3.8e-49 199.5 331 48.0
SGA_v2.0_scaffold78G25382 Striga asiatica HOM05D003676 ORTHO05D004262 1.1e-48 198.0 320 48.4
Carub.0008s2827 Capsella rubella HOM05D003676 ORTHO05D004262 3.2e-48 196.4 330 46.7
ECA232G1625 Erigeron canadensis HOM05D003676 ORTHO05D004262 3.2e-48 196.4 330 43.6
Glyma.01G166300 Glycine max HOM05D003676 ORTHO05D004262 3.2e-48 196.4 327 47.7
Phvul.003G262100 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 4.2e-48 196.1 331 50.2
Aqoxy6G02292 Aquilegia oxysepala HOM05D003676 ORTHO05D004262 7.1e-48 195.3 335 46.9
Gohir.D11G183000 Gossypium hirsutum HOM05D003676 ORTHO05D004262 2.1e-47 193.7 311 46.3
AT5G66230 Arabidopsis thaliana HOM05D003676 ORTHO05D003783 3.5e-47 193.0 327 48.0
Glyma.02G048700 Glycine max HOM05D003676 ORTHO05D004262 3.5e-47 193.0 343 49.3
HanXRQChr09g0256601 Helianthus annuus HOM05D003676 ORTHO05D004262 6.0e-47 192.2 321 44.2
TWI53G0168 Tripterygium wilfordii HOM05D003676 ORTHO05D004262 7.8e-47 191.8 342 47.7
COL.COLO4_21910 Corchorus olitorius HOM05D003676 ORTHO05D004262 1.3e-46 191.0 346 44.8
BolC9t54086H Brassica oleracea HOM05D003676 ORTHO05D004262 1.7e-46 190.7 327 50.2
Thhalv10004614m.g Eutrema salsugineum HOM05D003676 ORTHO05D004262 1.7e-46 190.7 330 45.5
GSVIVG01018782001 Vitis vinifera HOM05D003676 ORTHO05D004262 5.1e-46 189.1 251 52.6
A09p10110 Brassica napus HOM05D003676 ORTHO05D004262 6.6e-46 188.7 327 47.7
C09p11980 Brassica napus HOM05D003676 ORTHO05D004262 6.6e-46 188.7 328 50.3
Gorai.007G195000 Gossypium raimondii HOM05D003676 ORTHO05D004262 6.6e-46 188.7 311 45.3
BraA09t36654Z Brassica rapa HOM05D003676 ORTHO05D004262 1.9e-45 187.2 325 48.9
Sc07g0000980 Simmondsia chinensis HOM05D003676 ORTHO05D004262 1.9e-45 187.2 293 50.5
Glyma.11G077200 Glycine max HOM05D003676 ORTHO05D004262 2.5e-45 186.8 325 50.8
FAN28G1902 Fragaria x ananassa HOM05D003676 ORTHO05D004262 5.6e-45 185.7 341 48.1
Gohir.D11G182900 Gossypium hirsutum HOM05D003676 ORTHO05D004262 7.3e-45 185.3 328 44.2
HanXRQChr15g0487251 Helianthus annuus HOM05D003676 ORTHO05D004262 2.1e-44 183.7 325 45.2
Ca_22374_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 1.8e-43 180.6 332 42.2
MBI05_g30743_MAGBIO Magnolia biondii HOM05D003676 ORTHO05D004262 1.8e-43 180.6 323 43.0
Gorai.007G194900 Gossypium raimondii HOM05D003676 ORTHO05D004262 4.0e-43 179.5 324 44.1
Lj4A218T52 Lonicera japonica HOM05D003676 ORTHO05D004262 9.9e-42 174.9 317 44.2
Sp2g30470 Schrenkiella parvula HOM05D003676 ORTHO05D004262 9.9e-42 174.9 328 47.0
Lsat_1_v5_gn_4_146360 Lactuca sativa HOM05D003676 ORTHO05D004262 2.2e-41 173.7 322 41.3
Sc16g0002190 Simmondsia chinensis HOM05D003676 ORTHO05D004262 8.4e-41 171.8 319 42.3
Ca_25824_v3 Cicer arietinum L. HOM05D003676 ORTHO05D004262 1.4e-40 171.0 327 45.9
THA.LOC104819178 Tarenaya hassleriana HOM05D003676 ORTHO05D004262 1.9e-40 170.6 329 42.9
Gohir.A02G170700 Gossypium hirsutum HOM05D003676 ORTHO05D004262 9.3e-40 168.3 402 37.8
Migut.H01153 Erythranthe guttata HOM05D003676 ORTHO05D004262 1.6e-39 167.5 335 43.6
Haze_03763 Corylus avellana HOM05D003676 ORTHO05D004262 2.1e-39 167.2 183 60.1
Gohir.D03G009400 Gossypium hirsutum HOM05D003676 ORTHO05D004262 3.5e-39 166.4 406 37.4
Actinidia22976 Actinidia chinensis HOM05D003676 ORTHO05D004262 6.0e-39 165.6 260 51.9
Lsat_1_v5_gn_3_74521 Lactuca sativa HOM05D003676 ORTHO05D004262 1.3e-38 164.5 324 42.0
Gorai.003G009600 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.9e-38 162.9 409 37.9
HPP92_020902 Vanilla planifolia HOM05D003676 ORTHO05D004262 6.7e-38 162.2 338 42.0
Ah.03g148760 Amaranthus hybridus HOM05D003676 ORTHO05D004262 8.7e-38 161.8 301 42.9
AL8G45300 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 3.3e-37 159.8 219 51.1
Os10g0577400 Oryza sativa ssp. japonica HOM05D003676 ORTHO05D004262 5.3e-35 152.5 339 38.9
ECA246G1385 Erigeron canadensis HOM05D003676 ORTHO05D004262 1.2e-34 151.4 293 41.0
CDE05G2608 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 8.4e-33 145.2 312 40.4
AL5G31630 Arabidopsis lyrata HOM05D003676 ORTHO05D004262 1.9e-32 144.1 319 41.1
AT3G51230 Arabidopsis thaliana HOM05D003676 ORTHO05D004262 9.3e-32 141.7 195 51.8
CDE05G0776 Ceratophyllum demersum HOM05D003676 ORTHO05D004262 1.2e-31 141.4 246 47.6
Zm00001eb024930 Zea mays HOM05D003676 ORTHO05D004262 6.0e-31 139.0 343 37.0
TPR.G18183 Trifolium pratense HOM05D003676 ORTHO05D004262 7.9e-31 138.7 314 40.4
Zm00001eb224920 Zea mays HOM05D003676 ORTHO05D004262 1.8e-30 137.5 363 35.8
Phvul.002G108800 Phaseolus vulgaris HOM05D003676 ORTHO05D004262 2.3e-30 137.1 298 40.3
Psat2g154560 Pisum sativum HOM05D003676 ORTHO05D004262 6.7e-30 135.6 312 42.9
PGSC0003DMG400023891 Solanum tuberosum HOM05D003676 ORTHO05D004262 6.7e-30 135.6 300 39.7
DCAR_025998 Daucus carota HOM05D003676 ORTHO05D004262 8.7e-30 135.2 236 45.8
Medtr5g022010 Medicago truncatula HOM05D003676 ORTHO05D004262 1.1e-29 134.8 314 38.9
CARHR160810 Cardamine hirsuta HOM05D003676 ORTHO05D004262 4.3e-29 132.9 200 49.5
Sp5g10990 Schrenkiella parvula HOM05D003676 ORTHO05D004262 4.3e-29 132.9 333 40.2
ATR0149G006 Amborella trichopoda HOM05D003676 ORTHO05D004262 5.6e-29 132.5 347 39.5
Nn1g05888 Nelumbo nucifera HOM05D003676 ORTHO05D004262 1.3e-28 131.3 321 33.6
Lalb_Chr09g0321731 Lupinus albus HOM05D003676 ORTHO05D004262 4.8e-28 129.4 317 39.1
BcaNung00393 Brassica carinata HOM05D003676 ORTHO05D004262 4.0e-27 126.3 205 48.3
Solyc02g062170.3 Solanum lycopersicum HOM05D003676 ORTHO05D004262 4.0e-27 126.3 295 37.3
Carub.0005s1760 Capsella rubella HOM05D003676 ORTHO05D004262 6.9e-27 125.6 224 46.9
Sopen02g013140 Solanum pennellii HOM05D003676 ORTHO05D004262 4.5e-26 122.9 295 37.3
SHI32179 Sapria himalayana HOM05D003676 ORTHO05D004262 5.8e-26 122.5 307 36.2
Nitab4.5_0002337g0030 Nicotiana tabacum HOM05D003676 ORTHO05D004262 7.6e-26 122.1 310 36.1
Nitab4.5_0000188g0110 Nicotiana tabacum HOM05D003676 ORTHO05D004262 1.7e-25 120.9 204 50.0
A01p23560 Brassica napus HOM05D003676 ORTHO05D004262 3.2e-24 116.7 210 44.3
BraA01t02262Z Brassica rapa HOM05D003676 ORTHO05D004262 3.2e-24 116.7 210 44.3
BcaC09g50089 Brassica carinata HOM05D003676 ORTHO05D004262 4.2e-24 116.3 239 42.3
C01p29220 Brassica napus HOM05D003676 ORTHO05D004262 4.2e-24 116.3 239 42.3
Atru.chr1.3640 Acer truncatum HOM05D003676 ORTHO05D004262 7.1e-24 115.5 142 60.6
BcaNung04494 Brassica carinata HOM05D003676 ORTHO05D004262 2.1e-23 114.0 224 44.6
HanXRQChr16g0531461 Helianthus annuus HOM05D003676 ORTHO05D004262 4.6e-23 112.8 225 38.2
SEGI_09532 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 8.7e-22 108.6 348 31.0
SEGI_21114 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 8.7e-22 108.6 321 30.8
vmacro23249 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.2e-18 98.2 205 41.5
vmacro23473 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 1.2e-18 98.2 205 41.5
Gorai.010G060700 Gossypium raimondii HOM05D003676 ORTHO05D004262 4.5e-18 96.3 126 58.7
Atru.chr1.3647 Acer truncatum HOM05D003676 ORTHO05D004262 6.5e-17 92.4 338 33.7
RcHm_v2.0_Chr6g0272671 Rosa chinensis HOM05D003676 ORTHO05D004262 3.6e-15 86.7 123 46.3
SEGI_24904 Sequoiadendron giganteum HOM05D003676 ORTHO05D004262 8.8e-14 82.0 279 30.1
vmacro22131 Vaccinium macrocarpon HOM05D003676 ORTHO05D004262 2.0e-13 80.9 275 39.3
SalBow1G4548 Salvia bowleyana HOM05D004561 ORTHO05D005315 1.1e-11 75.1 42 92.9
Mapoly0004s0127 Marchantia polymorpha HOM05D003676 ORTHO05D030105 1.5e-10 71.2 418 28.2
Gohir.D09G239350 Gossypium hirsutum HOM05D003676 ORTHO05D004262 1.7e-09 67.8 56 62.5
Gorai.006G262100 Gossypium raimondii HOM05D003676 ORTHO05D004262 3.8e-09 66.6 56 60.7
TAR629G3197 Trochodendron aralioides HOM05D003676 ORTHO05D004262 2.7e-07 60.5 117 41.0
PSO700G0244 Papaver somniferum HOM05D065651 ORTHO05D004262 3.6e-07 60.1 178 33.7
PSO170G2947 Papaver somniferum HOM05D065651 ORTHO05D004262 6.1e-07 59.3 247 30.8
SMO340G0107 Selaginella moellendorffii HOM05D003676 ORTHO05D004262 1.0e-06 58.5 269 27.5
AagrBONN_evm.TU.Sc2ySwM_362.2718 Anthoceros agrestis HOM05D003676 ORTHO05D004262 6.7e-06 55.8 148 39.9


User provided reference genes

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