Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0862 Salvia bowleyana HOM05D007633 ORTHO05D008817 1.3e-131 473.0 238 100.0
Migut.N00191 Erythranthe guttata HOM05D007633 ORTHO05D008817 3.1e-43 179.5 224 47.8
Oeu011618.1 Olea europaea HOM05D007633 ORTHO05D008817 4.1e-40 169.1 217 43.8
Hma1.2p1_0745F.1_g212150 Hydrangea macrophylla HOM05D007633 ORTHO05D008817 1.7e-38 163.7 232 40.5
MSTRG.21860 Avicennia marina HOM05D007633 ORTHO05D008817 4.7e-36 155.6 258 42.2
CSS0018565 Camellia sinensis var. sinensis HOM05D007633 ORTHO05D008817 2.9e-33 146.4 239 38.1
Nitab4.5_0008118g0020 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.1e-32 144.4 243 36.2
Cc03_g03920 Coffea canephora HOM05D007633 ORTHO05D008817 1.4e-32 144.1 246 38.2
Nitab4.5_0001342g0010 Nicotiana tabacum HOM05D007633 ORTHO05D008817 4.2e-32 142.5 243 37.9
Actinidia36954 Actinidia chinensis HOM05D007633 ORTHO05D008817 3.5e-31 139.4 205 39.5
Sopen09g031040 Solanum pennellii HOM05D007633 ORTHO05D008817 4.6e-31 139.0 245 36.3
PGSC0003DMG400032254 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.0e-30 137.9 245 36.3
Manes.03G177200 Manihot esculenta HOM05D007633 ORTHO05D008817 1.3e-30 137.5 239 35.1
Solyc09g082160.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 1.3e-30 137.5 245 35.9
Nn1g02349 Nelumbo nucifera HOM05D007633 ORTHO05D008817 6.6e-30 135.2 237 37.1
Dinv14003 Davidia involucrata HOM05D007633 ORTHO05D008817 1.2e-28 131.0 225 36.0
Peaxi162Scf00192g01119 Petunia axillaris HOM05D007633 ORTHO05D008817 1.8e-27 127.1 239 36.4
Sopen06g019290 Solanum pennellii HOM05D007633 ORTHO05D008817 3.1e-27 126.3 168 41.7
TAR636G0739 Trochodendron aralioides HOM05D007633 ORTHO05D008817 6.9e-27 125.2 227 34.8
Ca_24403_v3 Cicer arietinum L. HOM05D007633 ORTHO05D008817 9.0e-27 124.8 241 34.9
QL06p002095 Quercus lobata HOM05D007633 ORTHO05D008817 1.2e-26 124.4 242 33.1
Sabra10G0057400 Salix brachista HOM05D007633 ORTHO05D008817 1.5e-26 124.0 224 31.7
Potri.008G154200 Populus trichocarpa HOM05D007633 ORTHO05D008817 2.0e-26 123.6 240 33.8
Potri.010G086300 Populus trichocarpa HOM05D007633 ORTHO05D008817 2.0e-26 123.6 243 31.7
RcHm_v2.0_Chr4g0415951 Rosa chinensis HOM05D007633 ORTHO05D008817 4.4e-26 122.5 260 33.1
HanXRQChr02g0035611 Helianthus annuus HOM05D007633 ORTHO05D008817 5.8e-26 122.1 214 36.0
Medtr5g006410 Medicago truncatula HOM05D007633 ORTHO05D008817 9.9e-26 121.3 237 33.8
Peaxi162Scf00092g00615 Petunia axillaris HOM05D007633 ORTHO05D008817 1.3e-25 120.9 247 35.2
LjContig00408g0001251 Lotus japonicus HOM05D007633 ORTHO05D008817 3.8e-25 119.4 267 32.6
TPR.G38043 Trifolium pratense HOM05D007633 ORTHO05D008817 3.8e-25 119.4 237 31.6
Glyma.11G006100 Glycine max HOM05D007633 ORTHO05D008817 4.9e-25 119.0 255 32.5
Solyc06g054140.4 Solanum lycopersicum HOM05D007633 ORTHO05D008817 6.4e-25 118.6 174 38.5
MELO3C006526.2 Cucumis melo HOM05D007633 ORTHO05D008817 8.4e-25 118.2 244 35.7
Rhsim02G0025900 Rhododendron simsii HOM05D007633 ORTHO05D008817 1.1e-24 117.9 208 35.1
GSVIVG01017995001 Vitis vinifera HOM05D007633 ORTHO05D008817 1.4e-24 117.5 244 33.2
Ciclev10005651m.g Citrus clementina HOM05D007633 ORTHO05D008817 1.9e-24 117.1 256 34.4
TWI73G0352 Tripterygium wilfordii HOM05D007633 ORTHO05D008817 1.9e-24 117.1 254 32.3
FvH4_4g16290 Fragaria vesca HOM05D007633 ORTHO05D008817 4.2e-24 115.9 267 29.2
FAN12G0707 Fragaria x ananassa HOM05D007633 ORTHO05D008817 4.2e-24 115.9 267 29.2
Cfa015662 Carpinus fangiana HOM05D007633 ORTHO05D008817 5.4e-24 115.5 259 32.0
Glyma.01G237200 Glycine max HOM05D007633 ORTHO05D008817 5.4e-24 115.5 238 32.4
ECA240G3784 Erigeron canadensis HOM05D000137 ORTHO05D000452 9.3e-24 114.8 201 34.3
Haze_00885 Corylus avellana HOM05D007633 ORTHO05D008817 1.2e-23 114.4 259 31.7
FAN02G3335 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.6e-23 114.0 267 29.2
CsaV3_3G013230 Cucumis sativus L. HOM05D007633 ORTHO05D008817 2.1e-23 113.6 252 34.9
Atru.chr4.2449 Acer truncatum HOM05D007633 ORTHO05D008817 2.7e-23 113.2 259 33.6
PSO210G0191 Papaver somniferum HOM05D007633 ORTHO05D008817 2.7e-23 113.2 242 30.2
PGR004G0463 Punica granatum HOM05D007633 ORTHO05D008817 1.0e-22 111.3 229 34.5
FAN22G0362 Fragaria x ananassa HOM05D007633 ORTHO05D008817 1.3e-22 110.9 267 29.2
Lalb_Chr01g0013131 Lupinus albus HOM05D007633 ORTHO05D008817 1.7e-22 110.5 228 32.0
CANSAT78G1135 Cannabis sativa HOM05D007633 ORTHO05D008817 3.9e-22 109.4 260 33.5
Lsat_1_v5_gn_7_64401 Lactuca sativa HOM05D007633 ORTHO05D008817 5.1e-22 109.0 217 32.7
Gohir.A09G053600 Gossypium hirsutum HOM05D007633 ORTHO05D008817 1.5e-21 107.5 245 31.4
PSO761G0330 Papaver somniferum HOM05D007633 ORTHO05D008817 1.5e-21 107.5 242 29.8
MD16G1195500 Malus domestica HOM05D007633 ORTHO05D008817 1.9e-21 107.1 222 32.9
Nitab4.5_0000321g0150 Nicotiana tabacum HOM05D007633 ORTHO05D008817 1.9e-21 107.1 249 32.5
Thecc.04G233700 Theobroma cacao HOM05D007633 ORTHO05D008817 2.5e-21 106.7 248 32.7
Psat4g209480 Pisum sativum HOM05D007633 ORTHO05D008817 3.3e-21 106.3 179 35.8
Prupe.1G015500 Prunus persica HOM05D007633 ORTHO05D008817 4.3e-21 105.9 163 38.0
Eucgr.H03451 Eucalyptus grandis HOM05D007633 ORTHO05D008817 7.3e-21 105.1 270 31.1
ATR0697G107 Amborella trichopoda HOM05D007633 ORTHO05D008817 2.1e-20 103.6 228 31.1
Nitab4.5_0001920g0040 Nicotiana tabacum HOM05D007633 ORTHO05D008817 2.1e-20 103.6 209 36.4
Sed0010969 Sechium edule HOM05D007633 ORTHO05D008817 2.1e-20 103.6 224 32.6
Gorai.006G055000 Gossypium raimondii HOM05D007633 ORTHO05D008817 2.8e-20 103.2 251 31.5
Gohir.D09G053050 Gossypium hirsutum HOM05D007633 ORTHO05D008817 4.8e-20 102.4 245 31.8
PSO761G0485 Papaver somniferum HOM05D007633 ORTHO05D008817 6.2e-20 102.1 239 28.9
Phvul.002G044600 Phaseolus vulgaris HOM05D007633 ORTHO05D008817 8.1e-20 101.7 254 31.9
PSO210G6592 Papaver somniferum HOM05D007633 ORTHO05D008817 4.0e-19 99.4 235 29.4
vmacro15349 Vaccinium macrocarpon HOM05D007633 ORTHO05D008817 6.9e-19 98.6 213 32.4
VMungo1215G1793 Vigna mungo HOM05D007633 ORTHO05D008817 9.0e-19 98.2 266 30.5
Duzib212G0599 Durio zibethinus HOM05D007633 ORTHO05D008817 2.0e-18 97.1 164 39.6
Aqoxy2G03409 Aquilegia oxysepala HOM05D007633 ORTHO05D008817 2.2e-17 93.6 220 27.7
HPP92_006116 Vanilla planifolia HOM05D007633 ORTHO05D008817 1.9e-16 90.5 252 31.0
ClCG05G005110 Citrullus lanatus HOM05D007633 ORTHO05D008817 2.4e-16 90.1 249 31.7
VMungo1215G1192 Vigna mungo HOM05D007633 ORTHO05D008817 3.2e-16 89.7 280 30.4
CDE07G1037 Ceratophyllum demersum HOM05D007633 ORTHO05D008817 2.1e-15 87.0 143 35.0
Sc19g0004060 Simmondsia chinensis HOM05D005574 ORTHO05D007102 2.7e-15 86.7 256 27.7
Ah.04g154590 Amaranthus hybridus HOM05D007633 ORTHO05D008817 7.9e-15 85.1 237 31.2
Hund12119 Selenicereus undatus HOM05D007633 ORTHO05D008817 2.3e-14 83.6 228 28.5
SEGI_17234 Sequoiadendron giganteum HOM05D007633 ORTHO05D008817 3.3e-13 79.7 150 35.3
PGSC0003DMG400016306 Solanum tuberosum HOM05D007633 ORTHO05D008817 1.6e-12 77.4 98 39.8
FAN07G1430 Fragaria x ananassa HOM05D007633 ORTHO05D008817 6.2e-12 75.5 203 28.1
AT1G05430 Arabidopsis thaliana HOM05D012198 ORTHO05D008817 1.4e-11 74.3 245 33.1
CARHR205340 Cardamine hirsuta HOM05D012198 ORTHO05D008817 2.4e-11 73.6 226 31.4
THA.LOC104826165 Tarenaya hassleriana HOM05D012198 ORTHO05D008817 6.9e-11 72.0 233 30.5
AUR62034710 Chenopodium quinoa HOM05D007633 ORTHO05D008817 1.5e-10 70.9 133 32.3
AL1G15270 Arabidopsis lyrata HOM05D012198 ORTHO05D008817 1.0e-09 68.2 211 30.8
Aa31LG1G19200 Aethionema arabicum HOM05D005574 ORTHO05D007102 1.7e-09 67.4 240 30.0
Carub.0001s0476 Capsella rubella HOM05D012198 ORTHO05D008817 2.9e-09 66.6 216 30.6
Sp1g04300 Schrenkiella parvula HOM05D012198 ORTHO05D008817 4.2e-08 62.8 230 27.4
Lsat_1_v5_gn_8_155361 Lactuca sativa HOM05D007633 ORTHO05D008817 3.5e-07 59.7 131 28.2
AUR62043551 Chenopodium quinoa HOM05D007633 ORTHO05D008817 7.9e-07 58.5 186 28.5
Thhalv10008449m.g Eutrema salsugineum HOM05D012198 ORTHO05D008817 7.9e-07 58.5 262 26.3
Os10g0430600 Oryza sativa ssp. japonica HOM05D026697 ORTHO05D008817 1.0e-06 58.2 186 25.3
BcaB02g06861 Brassica carinata HOM05D012198 ORTHO05D008817 1.3e-06 57.8 211 29.4


User provided reference genes

Program Settings