Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0848 Salvia bowleyana HOM05D008184 ORTHO05D002997 3.6e-89 331.6 179 100.0
SalBow1G3532 Salvia bowleyana HOM05D006463 ORTHO05D002997 5.0e-30 135.2 126 51.6
SalBow8G3441 Salvia bowleyana HOM05D008275 ORTHO05D009801 1.0e-27 127.5 121 51.2
SalBow6G1837 Salvia bowleyana HOM05D008275 ORTHO05D009801 7.4e-26 121.3 124 47.6
SalBow6G0904 Salvia bowleyana HOM05D008275 ORTHO05D009801 5.9e-23 111.7 120 41.7
SalBow5G3697 Salvia bowleyana HOM05D006463 ORTHO05D009801 1.2e-20 104.0 112 44.6
SGA_v2.0_scaffold180G39665 Striga asiatica HOM05D002069 ORTHO05D002997 3.7e-17 92.4 115 40.0
Hund04146 Selenicereus undatus HOM05D024703 ORTHO05D002997 6.3e-17 91.7 105 40.0
SGA_v2.0_scaffold17G08171 Striga asiatica HOM05D002069 ORTHO05D002997 1.6e-15 87.0 115 40.0
SGA_v2.0_scaffold46G17332 Striga asiatica HOM05D010580 ORTHO05D002997 3.5e-15 85.9 114 34.2
SalBow5G3844 Salvia bowleyana HOM05D000523 ORTHO05D002439 5.0e-14 82.0 125 36.0
SGA_v2.0_scaffold309G48185 Striga asiatica HOM05D002069 ORTHO05D002997 4.2e-13 79.0 112 34.8
Hund15097 Selenicereus undatus HOM05D002461 ORTHO05D002997 5.5e-13 78.6 88 38.6
SGA_v2.0_scaffold166G38398 Striga asiatica HOM05D002069 ORTHO05D002997 5.5e-13 78.6 112 33.9
SGA_v2.0_scaffold1002G53783 Striga asiatica HOM05D002069 ORTHO05D002997 9.4e-13 77.8 112 33.0
Hund24082 Selenicereus undatus HOM05D024703 ORTHO05D002997 4.7e-12 75.5 105 35.2
Hund08156 Selenicereus undatus HOM05D024703 ORTHO05D002997 6.1e-12 75.1 105 36.2
DCAR_032318 Daucus carota HOM05D002069 ORTHO05D001421 8.0e-12 74.7 116 32.8
DCAR_001080 Daucus carota HOM05D008184 ORTHO05D002997 1.4e-11 73.9 134 32.8
DCAR_010992 Daucus carota HOM05D008184 ORTHO05D002997 1.4e-11 73.9 134 32.8
SalBow2G3294 Salvia bowleyana HOM05D011574 ORTHO05D009801 4.0e-11 72.4 120 31.7
AUR62033137 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.2e-10 70.9 95 36.8
EL10Ac5g12018 Beta vulgaris HOM05D006463 ORTHO05D002997 1.5e-10 70.5 124 33.9
Hund12478 Selenicereus undatus HOM05D008410 ORTHO05D002997 1.7e-09 67.0 77 40.3
AUR62018847 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.7e-09 65.9 95 33.7
Hund03828 Selenicereus undatus HOM05D008410 ORTHO05D002997 3.7e-09 65.9 114 28.9
AUR62017097 Chenopodium quinoa HOM05D006463 ORTHO05D002997 4.9e-09 65.5 95 33.7
DCAR_010539 Daucus carota HOM05D008184 ORTHO05D002997 6.3e-09 65.1 119 30.3
Hund14543 Selenicereus undatus HOM05D002461 ORTHO05D002997 6.3e-09 65.1 64 43.8
AUR62033905 Chenopodium quinoa HOM05D002461 ORTHO05D000898 8.3e-09 64.7 111 32.4
Hund26057 Selenicereus undatus HOM05D008769 ORTHO05D010955 8.3e-09 64.7 107 32.7
AUR62014151 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.1e-08 64.3 95 33.7
AUR62040414 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.1e-08 64.3 95 33.7
SGA_v2.0_scaffold41G15799 Striga asiatica HOM05D017425 ORTHO05D019383 1.1e-08 64.3 108 31.5
AUR62041423 Chenopodium quinoa HOM05D002461 ORTHO05D008988 1.4e-08 63.9 109 30.3
Ah.01g009500 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-08 63.5 95 32.6
Ah.05g176190 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-08 63.5 95 32.6
Ah.09g225340 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-08 63.5 95 32.6
Ah.14g082230 Amaranthus hybridus HOM05D006463 ORTHO05D002997 1.8e-08 63.5 95 32.6
AUR62002595 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62005650 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62008556 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62008643 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62010442 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62011828 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62013764 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62014771 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62020656 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62024534 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62024696 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62027688 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62029074 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62029947 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62031767 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62033912 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62035885 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62035966 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62038642 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62039346 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62044062 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
AUR62044283 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.8e-08 63.5 111 32.4
Hund08888 Selenicereus undatus HOM05D008769 ORTHO05D010955 1.8e-08 63.5 123 28.5
Ah.03g145400 Amaranthus hybridus HOM05D006463 ORTHO05D002997 3.1e-08 62.8 95 31.6
AUR62016762 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.1e-08 62.8 88 35.2
DCAR_017847 Daucus carota HOM05D008184 ORTHO05D002997 3.1e-08 62.8 89 36.0
AUR62031912 Chenopodium quinoa HOM05D006463 ORTHO05D002997 4.1e-08 62.4 95 33.7
SGA_v2.0_scaffold131G34381 Striga asiatica HOM05D002461 ORTHO05D002997 4.1e-08 62.4 108 31.5
AUR62030053 Chenopodium quinoa HOM05D006463 ORTHO05D002997 7.0e-08 61.6 88 35.2
AUR62038887 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.0e-08 61.6 111 31.5
DCAR_001028 Daucus carota HOM05D008184 ORTHO05D002997 9.1e-08 61.2 119 27.7
DCAR_010132 Daucus carota HOM05D008184 ORTHO05D002997 9.1e-08 61.2 89 33.7
DCAR_010926 Daucus carota HOM05D008184 ORTHO05D010791 9.1e-08 61.2 89 33.7
DCAR_022582 Daucus carota HOM05D008184 ORTHO05D010791 9.1e-08 61.2 89 33.7
DCAR_030011 Daucus carota HOM05D008184 ORTHO05D002997 9.1e-08 61.2 89 33.7
AUR62019726 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.2e-07 60.8 95 31.6
AUR62025070 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.2e-07 60.8 95 32.6
AUR62025921 Chenopodium quinoa HOM05D002461 ORTHO05D000898 1.2e-07 60.8 103 30.1
AUR62030157 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.6e-07 60.5 95 32.6
DCAR_030596 Daucus carota HOM05D008184 ORTHO05D002997 1.6e-07 60.5 84 35.7
Lsat_1_v5_gn_1_64161 Lactuca sativa HOM05D002069 ORTHO05D001421 1.6e-07 60.5 97 36.1
Lsat_1_v5_gn_8_79561 Lactuca sativa HOM05D002069 ORTHO05D001421 1.6e-07 60.5 124 32.3
Lsat_1_v5_gn_9_46640 Lactuca sativa HOM05D002069 ORTHO05D001421 1.6e-07 60.5 124 32.3
Ah.10g026780 Amaranthus hybridus HOM05D006463 ORTHO05D002997 2.0e-07 60.1 95 31.6
AUR62006153 Chenopodium quinoa HOM05D006463 ORTHO05D002997 2.0e-07 60.1 100 32.0
Lsat_1_v5_gn_0_33721 Lactuca sativa HOM05D002069 ORTHO05D001421 2.0e-07 60.1 97 36.1
Lsat_1_v5_gn_2_65260 Lactuca sativa HOM05D002069 ORTHO05D001421 2.0e-07 60.1 124 32.3
Lsat_1_v5_gn_3_34060 Lactuca sativa HOM05D002069 ORTHO05D001421 2.7e-07 59.7 123 30.1
Lsat_1_v5_gn_9_109960 Lactuca sativa HOM05D002069 ORTHO05D001421 2.7e-07 59.7 123 30.1
Hund23767 Selenicereus undatus HOM05D008769 ORTHO05D010955 2.7e-07 59.7 123 27.6
AUR62012395 Chenopodium quinoa HOM05D006463 ORTHO05D002997 3.5e-07 59.3 95 32.6
DCAR_031425 Daucus carota HOM05D008184 ORTHO05D002997 3.5e-07 59.3 89 33.7
DCAR_031896 Daucus carota HOM05D008184 ORTHO05D002997 3.5e-07 59.3 99 31.3
DCAR_032236 Daucus carota HOM05D008184 ORTHO05D010791 3.5e-07 59.3 99 31.3
Lsat_1_v5_gn_4_176160 Lactuca sativa HOM05D002069 ORTHO05D001421 3.5e-07 59.3 124 32.3
AUR62037384 Chenopodium quinoa HOM05D006463 ORTHO05D002997 4.5e-07 58.9 100 32.0
DCAR_022699 Daucus carota HOM05D008184 ORTHO05D002997 4.5e-07 58.9 120 29.2
DCAR_001163 Daucus carota HOM05D008184 ORTHO05D002997 5.9e-07 58.5 119 27.7
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 5.9e-07 58.5 119 27.7
Hund10598 Selenicereus undatus HOM05D008769 ORTHO05D010955 5.9e-07 58.5 123 27.6
AUR62033528 Chenopodium quinoa HOM05D006463 ORTHO05D002997 1.0e-06 57.8 88 33.0
DCAR_015843 Daucus carota HOM05D008184 ORTHO05D002997 1.0e-06 57.8 76 34.2
Lsat_1_v5_gn_5_100580 Lactuca sativa HOM05D002069 ORTHO05D001421 1.0e-06 57.8 124 31.5
DCAR_030557 Daucus carota HOM05D008184 ORTHO05D002997 1.3e-06 57.4 119 26.9
DCAR_025060 Daucus carota HOM05D008184 ORTHO05D002997 2.3e-06 56.6 99 30.3
Hund10509 Selenicereus undatus HOM05D008769 ORTHO05D010955 2.3e-06 56.6 123 27.6
DCAR_005230 Daucus carota HOM05D002069 ORTHO05D001421 3.8e-06 55.8 122 24.6
DCAR_005348 Daucus carota HOM05D008184 ORTHO05D002997 3.8e-06 55.8 76 34.2
DCAR_024226 Daucus carota HOM05D002069 ORTHO05D001421 3.8e-06 55.8 122 24.6
DCAR_024745 Daucus carota HOM05D008184 ORTHO05D002997 3.8e-06 55.8 119 27.7
Lsat_1_v5_gn_7_99121 Lactuca sativa HOM05D002069 ORTHO05D001421 5.0e-06 55.5 123 29.3
Lsat_1_v5_gn_9_99100 Lactuca sativa HOM05D002069 ORTHO05D001421 5.0e-06 55.5 97 34.0
AUR62019536 Chenopodium quinoa HOM05D002461 ORTHO05D000898 6.6e-06 55.1 128 30.5
Lsat_1_v5_gn_4_110341 Lactuca sativa HOM05D002069 ORTHO05D001421 6.6e-06 55.1 97 34.0
Hund01115 Selenicereus undatus HOM05D008769 ORTHO05D010955 6.6e-06 55.1 123 26.0
ECA236G0264 Erigeron canadensis HOM05D002069 ORTHO05D001421 8.6e-06 54.7 112 29.5


User provided reference genes

Program Settings