Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0796 Salvia bowleyana HOM05D006601 ORTHO05D008281 5.1e-104 381.3 229 100.0
SGA_v2.0_scaffold62G21313 Striga asiatica HOM05D006601 ORTHO05D008281 1.1e-71 273.9 182 76.9
Migut.F00866 Erythranthe guttata HOM05D006601 ORTHO05D008281 2.2e-70 269.6 190 75.8
Oeu030223.2 Olea europaea HOM05D006601 ORTHO05D008281 6.3e-70 268.1 197 72.6
Oeu026608.1 Olea europaea HOM05D006601 ORTHO05D008281 2.4e-69 266.2 229 72.9
MSTRG.9054 Avicennia marina HOM05D006601 ORTHO05D008281 7.7e-68 261.2 248 65.7
HanXRQChr11g0321661 Helianthus annuus HOM05D006601 ORTHO05D008281 1.9e-66 256.5 241 66.0
Thecc.10G114200 Theobroma cacao HOM05D006601 ORTHO05D008281 3.2e-66 255.8 193 69.9
unitig_899.g14469 Utricularia gibba HOM05D006601 ORTHO05D008281 3.2e-66 255.8 230 67.0
Dinv12840 Davidia involucrata HOM05D006601 ORTHO05D008281 7.2e-66 254.6 229 67.7
Rhsim09G0141800 Rhododendron simsii HOM05D006601 ORTHO05D008281 9.4e-66 254.2 191 71.7
DCAR_006335 Daucus carota HOM05D006601 ORTHO05D008281 3.6e-65 252.3 193 66.8
Aqoxy2G01120 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 4.7e-65 251.9 230 66.5
GSVIVG01010682001 Vitis vinifera HOM05D006601 ORTHO05D008281 6.1e-65 251.5 187 69.0
Cc02_g09570 Coffea canephora HOM05D006601 ORTHO05D008281 8.0e-65 251.1 177 71.8
Nitab4.5_0009484g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.4e-64 250.4 185 70.8
Phvul.002G091600 Phaseolus vulgaris HOM05D006601 ORTHO05D008281 1.4e-64 250.4 192 68.2
Prupe.5G030400 Prunus persica HOM05D006601 ORTHO05D008281 1.8e-64 250.0 237 66.7
Lalb_Chr10g0098441 Lupinus albus HOM05D006601 ORTHO05D008281 3.0e-64 249.2 183 72.7
Gohir.A05G287400 Gossypium hirsutum HOM05D006601 ORTHO05D008281 5.2e-64 248.4 194 67.0
Potri.008G019100 Populus trichocarpa HOM05D006601 ORTHO05D008281 2.0e-63 246.5 188 66.0
Gohir.D05G288500 Gossypium hirsutum HOM05D006601 ORTHO05D008281 2.6e-63 246.1 194 66.0
Gorai.009G303600 Gossypium raimondii HOM05D006601 ORTHO05D008281 2.6e-63 246.1 194 66.0
TAR633G2162 Trochodendron aralioides HOM05D006601 ORTHO05D008281 2.6e-63 246.1 190 68.9
CSS0000414 Camellia sinensis var. sinensis HOM05D006601 ORTHO05D008281 3.4e-63 245.7 183 70.5
Lj2g0012177 Lotus japonicus HOM05D006601 ORTHO05D008281 3.4e-63 245.7 187 69.5
Sopen11g002690 Solanum pennellii HOM05D006601 ORTHO05D008281 4.4e-63 245.4 191 68.1
Solyc11g006760.3 Solanum lycopersicum HOM05D006601 ORTHO05D008281 5.7e-63 245.0 191 68.1
Duzib114G0052 Durio zibethinus HOM05D006601 ORTHO05D008281 7.5e-63 244.6 194 66.5
PGSC0003DMG400023966 Solanum tuberosum HOM05D006601 ORTHO05D008281 7.5e-63 244.6 191 67.0
Medtr5g042160 Medicago truncatula HOM05D006601 ORTHO05D008281 1.7e-62 243.4 239 66.9
PSO339G2358 Papaver somniferum HOM05D006601 ORTHO05D008281 2.2e-62 243.0 244 63.1
ECA232G0968 Erigeron canadensis HOM05D006601 ORTHO05D008281 4.8e-62 241.9 153 78.4
MD06G1038200 Malus domestica HOM05D006601 ORTHO05D008281 4.8e-62 241.9 187 67.4
Glyma.01G052400 Glycine max HOM05D006601 ORTHO05D008281 6.3e-62 241.5 179 70.9
Glyma.02G110700 Glycine max HOM05D006601 ORTHO05D008281 1.1e-61 240.7 173 71.7
CAN.G1417.5 Capsicum annuum HOM05D006601 ORTHO05D008281 1.4e-61 240.4 191 66.0
vmacro10311 Vaccinium macrocarpon HOM05D006601 ORTHO05D008281 1.8e-61 240.0 250 62.0
Ca_04833_v3 Cicer arietinum L. HOM05D006601 ORTHO05D008281 2.4e-61 239.6 179 70.9
COL.COLO4_03655 Corchorus olitorius HOM05D006601 ORTHO05D008281 2.4e-61 239.6 194 65.5
MBI17_g13115_MAGBIO Magnolia biondii HOM05D006601 ORTHO05D008281 2.4e-61 239.6 229 69.4
Manes.10G062700 Manihot esculenta HOM05D006601 ORTHO05D008281 4.1e-61 238.8 189 65.6
TPR.G31604 Trifolium pratense HOM05D006601 ORTHO05D008281 4.1e-61 238.8 134 85.1
Atru.chr12.1047 Acer truncatum HOM05D006601 ORTHO05D008281 7.0e-61 238.0 189 68.3
Potri.010G240300 Populus trichocarpa HOM05D006601 ORTHO05D008281 7.0e-61 238.0 179 66.5
Lsat_1_v5_gn_0_8161 Lactuca sativa HOM05D006601 ORTHO05D008281 9.1e-61 237.7 201 66.7
Peaxi162Scf00125g00234 Petunia axillaris HOM05D006601 ORTHO05D008281 9.1e-61 237.7 216 63.0
Psat2g116120 Pisum sativum HOM05D006601 ORTHO05D008281 9.1e-61 237.7 179 69.8
Cfa010329 Carpinus fangiana HOM05D006601 ORTHO05D008281 1.6e-60 236.9 149 77.9
TWI38G1517 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 3.5e-60 235.7 230 65.7
CiPaw.13G041000 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.3e-59 233.8 229 60.7
PGR044G2546 Punica granatum HOM05D006601 ORTHO05D008281 1.7e-59 233.4 189 64.6
Eucgr.J00269 Eucalyptus grandis HOM05D006601 ORTHO05D008281 5.0e-59 231.9 178 70.8
Ciclev10016593m.g Citrus clementina HOM05D006601 ORTHO05D008281 6.5e-59 231.5 155 74.2
arahy.Tifrunner.gnm1.ann1.VBS9AQ Arachis hypogaea HOM05D006601 ORTHO05D008281 1.5e-58 230.3 184 66.8
Aa31LG10G7330 Aethionema arabicum HOM05D006601 ORTHO05D008281 1.9e-58 229.9 134 81.3
Os08g0558700 Oryza sativa ssp. japonica HOM05D006601 ORTHO05D008281 1.9e-58 229.9 143 77.6
RcHm_v2.0_Chr6g0269151 Rosa chinensis HOM05D006601 ORTHO05D008281 1.9e-58 229.9 150 72.7
Sed0022988 Sechium edule HOM05D006601 ORTHO05D008281 2.5e-58 229.6 134 82.1
Hund22273 Selenicereus undatus HOM05D006601 ORTHO05D008281 3.2e-58 229.2 160 72.5
AUR62041519 Chenopodium quinoa HOM05D006601 ORTHO05D008281 4.2e-58 228.8 134 81.3
ClCG08G008320 Citrullus lanatus HOM05D006601 ORTHO05D008281 7.2e-58 228.0 145 77.2
QL04p046797 Quercus lobata HOM05D006601 ORTHO05D008281 9.4e-58 227.6 229 63.3
QL04p047245 Quercus lobata HOM05D006601 ORTHO05D008281 9.4e-58 227.6 229 63.3
Carub.0005s1858 Capsella rubella HOM05D006601 ORTHO05D008281 2.1e-57 226.5 152 71.7
FvH4_2g10940 Fragaria vesca HOM05D006601 ORTHO05D008281 2.1e-57 226.5 184 64.7
THA.LOC104823558 Tarenaya hassleriana HOM05D006601 ORTHO05D008281 2.7e-57 226.1 192 61.5
FAN24G1745 Fragaria x ananassa HOM05D006601 ORTHO05D008281 3.6e-57 225.7 184 64.1
RcHm_v2.0_Chr2g0160691 Rosa chinensis HOM05D006601 ORTHO05D008281 3.6e-57 225.7 143 76.2
Sp5g10040 Schrenkiella parvula HOM05D006601 ORTHO05D008281 3.6e-57 225.7 193 63.2
Thhalv10010678m.g Eutrema salsugineum HOM05D006601 ORTHO05D008281 6.1e-57 224.9 193 62.2
AT3G52220 Arabidopsis thaliana HOM05D006601 ORTHO05D008281 8.0e-57 224.6 152 71.7
MELO3C019900.2 Cucumis melo HOM05D006601 ORTHO05D008281 1.0e-56 224.2 145 76.6
C08p27460 Brassica napus HOM05D006601 ORTHO05D008281 1.8e-56 223.4 193 61.1
BolC8t50363H Brassica oleracea HOM05D006601 ORTHO05D008281 1.8e-56 223.4 193 61.1
HPP92_000012 Vanilla planifolia HOM05D006601 ORTHO05D008281 2.3e-56 223.0 156 71.2
CARHR161980 Cardamine hirsuta HOM05D006601 ORTHO05D008281 3.0e-56 222.6 194 60.3
A09p45280 Brassica napus HOM05D006601 ORTHO05D008281 4.0e-56 222.2 193 61.7
BraA09t39991Z Brassica rapa HOM05D006601 ORTHO05D008281 4.0e-56 222.2 193 61.7
AL5G32810 Arabidopsis lyrata HOM05D006601 ORTHO05D008281 5.2e-56 221.9 194 60.3
Nn6g34864 Nelumbo nucifera HOM05D006601 ORTHO05D008281 8.8e-56 221.1 142 74.6
CsaV3_6G004290 Cucumis sativus L. HOM05D006601 ORTHO05D008281 1.5e-55 220.3 183 65.0
FAN20G1775 Fragaria x ananassa HOM05D006601 ORTHO05D008281 3.4e-55 219.2 130 79.2
FAN15G0841 Fragaria x ananassa HOM05D006601 ORTHO05D008281 6.3e-54 214.9 127 78.7
Lj3A925T73 Lonicera japonica HOM05D006601 ORTHO05D008281 7.0e-53 211.5 141 74.5
Sabra10G0188100 Salix brachista HOM05D006601 ORTHO05D008281 7.0e-53 211.5 250 48.4
SEGI_26123 Sequoiadendron giganteum HOM05D006601 ORTHO05D008281 7.0e-53 211.5 198 55.6
arahy.Tifrunner.gnm1.ann1.0XG3CD Arachis hypogaea HOM05D006601 ORTHO05D008281 7.2e-50 201.4 194 60.8
TWI63G1188 Tripterygium wilfordii HOM05D006601 ORTHO05D008281 5.2e-48 195.3 138 70.3
ATR0776G086 Amborella trichopoda HOM05D006601 ORTHO05D008281 1.7e-43 180.3 182 57.7
Mapoly0044s0087 Marchantia polymorpha HOM05D006601 ORTHO05D008281 1.1e-42 177.6 133 62.4
SMO367G0990 Selaginella moellendorffii HOM05D006601 ORTHO05D008281 1.1e-42 177.6 141 62.4
Pp3c1_22490 Physcomitrium patens HOM05D006601 ORTHO05D008281 1.9e-42 176.8 155 58.7
Actinidia31106 Actinidia chinensis HOM05D006601 ORTHO05D008281 2.8e-41 172.9 91 90.1
CDE04G0959 Ceratophyllum demersum HOM05D006601 ORTHO05D008281 4.0e-40 169.1 190 51.1
Nitab4.5_0002586g0010 Nicotiana tabacum HOM05D006601 ORTHO05D008281 1.1e-37 161.0 153 62.1
Sc09g0005300 Simmondsia chinensis HOM05D006601 ORTHO05D008281 9.5e-34 147.9 146 58.2
Haze_03300 Corylus avellana HOM05D006601 ORTHO05D008281 2.8e-33 146.4 111 71.2
AUR62042084 Chenopodium quinoa HOM05D006601 ORTHO05D008281 8.0e-33 144.8 186 48.9
BcaC07g39592 Brassica carinata HOM05D006601 ORTHO05D008281 5.8e-31 138.7 199 44.7
PSO692G0001 Papaver somniferum HOM05D006601 ORTHO05D008281 5.4e-29 132.1 187 59.9
PSO801G0555 Papaver somniferum HOM05D006601 ORTHO05D008281 5.4e-29 132.1 187 59.9
MCO05G050 Micromonas commoda HOM05D006601 ORTHO05D008281 2.1e-28 130.2 145 51.0
Cre18.g749347 Chlamydomonas reinhardtii HOM05D006601 ORTHO05D008281 7.8e-28 128.3 164 45.1
Aqoxy2G01116 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 1.1e-18 97.8 81 66.7
CiPaw.14G033700 Carya illinoinensis HOM05D006601 ORTHO05D008281 1.1e-18 97.8 80 67.5
Ah.06g186680 Amaranthus hybridus HOM05D006601 ORTHO05D008281 1.9e-18 97.1 115 52.2
Cfa024623 Carpinus fangiana HOM05D006601 ORTHO05D008281 6.2e-17 92.0 108 41.7
Zm00001eb039400 Zea mays HOM05D006601 ORTHO05D008281 3.1e-16 89.7 114 49.1
Lsat_1_v5_gn_4_8660 Lactuca sativa HOM05D006601 ORTHO05D008281 2.9e-14 83.2 56 75.0
EL10Ac7g17292 Beta vulgaris HOM05D006601 ORTHO05D008281 2.8e-09 66.6 31 83.9
Hma1.2p1_1491F.1_g286720 Hydrangea macrophylla HOM05D006601 ORTHO05D008281 1.4e-08 64.3 37 83.8
BcaC02g09271 Brassica carinata HOM05D006601 ORTHO05D008281 5.3e-08 62.4 53 67.9
Aqoxy2G01117 Aquilegia oxysepala HOM05D006601 ORTHO05D008281 9.0e-08 61.6 31 74.2
EL10Ac8g19171 Beta vulgaris HOM05D006601 ORTHO05D008281 6.4e-06 55.5 25 84.0


User provided reference genes

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