Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0717 Salvia bowleyana HOM05D000237 ORTHO05D000535 2.0e-100 369.0 176 100.0
Migut.N01936 Erythranthe guttata HOM05D000237 ORTHO05D000535 2.6e-15 86.3 117 45.3
CSS0004301 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D000535 1.9e-13 80.1 140 40.7
DCAR_001934 Daucus carota HOM05D001540 ORTHO05D001520 3.2e-13 79.3 153 34.6
Cc02_g32440 Coffea canephora HOM05D000237 ORTHO05D000535 1.2e-12 77.4 132 41.7
Actinidia19808 Actinidia chinensis HOM05D000237 ORTHO05D000535 2.1e-12 76.6 130 41.5
CSS0025087 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D000535 4.6e-12 75.5 138 39.1
vmacro19653 Vaccinium macrocarpon HOM05D000237 ORTHO05D000535 7.9e-12 74.7 131 39.7
Lj7A485G39 Lonicera japonica HOM05D000237 ORTHO05D000535 3.9e-11 72.4 129 39.5
Nitab4.5_0001903g0130 Nicotiana tabacum HOM05D000237 ORTHO05D000535 1.3e-09 67.4 143 34.3
CSS0021855 Camellia sinensis var. sinensis HOM05D000237 ORTHO05D000535 1.6e-09 67.0 130 40.8
CAN.G134.234 Capsicum annuum HOM05D000237 ORTHO05D000535 2.8e-09 66.2 143 35.0
Oeu012100.1 Olea europaea HOM05D000237 ORTHO05D000535 2.8e-09 66.2 69 47.8
Solyc01g098440.3 Solanum lycopersicum HOM05D000237 ORTHO05D000535 4.8e-09 65.5 125 36.0
TWI12G0068 Tripterygium wilfordii HOM05D000237 ORTHO05D000535 4.8e-09 65.5 143 36.4
Nitab4.5_0000245g0300 Nicotiana tabacum HOM05D000237 ORTHO05D000535 6.2e-09 65.1 143 35.0
Sopen01g042010 Solanum pennellii HOM05D000237 ORTHO05D000535 6.2e-09 65.1 125 36.0
Duzib177G0950 Durio zibethinus HOM05D000237 ORTHO05D000535 1.4e-08 63.9 89 43.8
Nn3g21206 Nelumbo nucifera HOM05D000237 ORTHO05D000535 1.4e-08 63.9 136 37.5
PGSC0003DMG402028595 Solanum tuberosum HOM05D000237 ORTHO05D000535 3.1e-08 62.8 88 42.0
FAN14G0612 Fragaria x ananassa HOM05D001540 ORTHO05D001520 6.9e-08 61.6 130 33.1
Manes.09G162000 Manihot esculenta HOM05D000237 ORTHO05D000535 6.9e-08 61.6 136 32.4
Peaxi162Scf00165g00613 Petunia axillaris HOM05D000237 ORTHO05D000535 9.0e-08 61.2 133 37.6
Glyma.10G157500 Glycine max HOM05D000237 ORTHO05D000535 1.5e-07 60.5 130 33.1
Hund21675 Selenicereus undatus HOM05D000237 ORTHO05D000535 1.5e-07 60.5 132 32.6
Atru.chr2.523 Acer truncatum HOM05D000237 ORTHO05D000535 2.0e-07 60.1 148 29.7
Peaxi162Scf00434g00734 Petunia axillaris HOM05D000237 ORTHO05D000535 2.6e-07 59.7 132 34.8
Eucgr.H04436 Eucalyptus grandis HOM05D000237 ORTHO05D000535 4.5e-07 58.9 99 40.4
Medtr1g082310 Medicago truncatula HOM05D000237 ORTHO05D000535 4.5e-07 58.9 147 31.3
RcHm_v2.0_Chr3g0453501 Rosa chinensis HOM05D000237 ORTHO05D000535 4.5e-07 58.9 128 32.0
FAN05G0677 Fragaria x ananassa HOM05D000237 ORTHO05D000535 5.8e-07 58.5 130 34.6
FAN05G4563 Fragaria x ananassa HOM05D000237 ORTHO05D000535 5.8e-07 58.5 130 34.6
Glyma.20G231000 Glycine max HOM05D000237 ORTHO05D000535 5.8e-07 58.5 148 29.1
MELO3C004315.2 Cucumis melo HOM05D000237 ORTHO05D000535 7.6e-07 58.2 130 32.3
Psat6g148640 Pisum sativum HOM05D000237 ORTHO05D000535 1.3e-06 57.4 134 35.8
FAN02G0932 Fragaria x ananassa HOM05D000237 ORTHO05D000535 1.7e-06 57.0 100 39.0
FAN09G4188 Fragaria x ananassa HOM05D000237 ORTHO05D000535 1.7e-06 57.0 131 32.8
FAN14G0858 Fragaria x ananassa HOM05D000237 ORTHO05D000535 1.7e-06 57.0 131 32.8
Lj5g0017418 Lotus japonicus HOM05D000237 ORTHO05D000535 1.7e-06 57.0 147 30.6
Lalb_Chr21g0310801 Lupinus albus HOM05D000237 ORTHO05D000535 2.2e-06 56.6 152 31.6
QL03p003658 Quercus lobata HOM05D000237 ORTHO05D000535 2.2e-06 56.6 148 31.1
Lalb_Chr02g0148451 Lupinus albus HOM05D000237 ORTHO05D000535 2.9e-06 56.2 167 28.1
FvH4_6g04990 Fragaria vesca HOM05D000237 ORTHO05D000535 3.8e-06 55.8 131 32.1
HanXRQChr05g0158861 Helianthus annuus HOM05D000237 ORTHO05D000535 3.8e-06 55.8 148 28.4
Sed0007903 Sechium edule HOM05D000237 ORTHO05D000535 3.8e-06 55.8 141 29.8
Aqoxy2G03176 Aquilegia oxysepala HOM05D000237 ORTHO05D000535 4.9e-06 55.5 150 30.7
Lsat_1_v5_gn_5_39200 Lactuca sativa HOM05D000237 ORTHO05D000535 4.9e-06 55.5 124 31.5
Potri.013G028100 Populus trichocarpa HOM05D000237 ORTHO05D000535 4.9e-06 55.5 175 30.3
Sc16g0008280 Simmondsia chinensis HOM05D000237 ORTHO05D000535 4.9e-06 55.5 139 36.7


User provided reference genes

Program Settings