Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0714 Salvia bowleyana HOM05D005408 ORTHO05D006790 0.0e+00 1822.8 940 100.0
MSTRG.21921 Avicennia marina HOM05D005408 ORTHO05D006790 0.0e+00 1129.0 958 65.6
Migut.N00286 Erythranthe guttata HOM05D005408 ORTHO05D006790 5.4e-309 1064.3 962 62.2
SGA_v2.0_scaffold43G16217 Striga asiatica HOM05D005408 ORTHO05D006790 2.6e-287 992.3 956 59.8
Oeu002940.1 Olea europaea HOM05D005408 ORTHO05D006790 1.1e-282 976.9 956 58.1
Oeu005084.1 Olea europaea HOM05D005408 ORTHO05D006790 3.3e-266 922.2 952 57.5
Dinv27073 Davidia involucrata HOM05D005408 ORTHO05D006790 3.6e-265 918.7 1005 54.4
Dinv29839 Davidia involucrata HOM05D005408 ORTHO05D006790 6.0e-260 901.4 961 55.3
Actinidia20821 Actinidia chinensis HOM05D005408 ORTHO05D006790 3.0e-259 899.0 998 53.3
Sopen09g033240 Solanum pennellii HOM05D005408 ORTHO05D006790 5.3e-256 888.3 1031 52.0
GSVIVG01027854001 Vitis vinifera HOM05D005408 ORTHO05D006790 2.2e-254 882.9 960 53.9
Peaxi162Scf00392g00730 Petunia axillaris HOM05D005408 ORTHO05D006790 3.8e-254 882.1 1006 51.9
CAN.G220.39 Capsicum annuum HOM05D005408 ORTHO05D006790 1.1e-253 880.6 1020 52.5
Thecc.04G259100 Theobroma cacao HOM05D005408 ORTHO05D006790 9.3e-253 877.5 932 54.2
PGSC0003DMG400017212 Solanum tuberosum HOM05D005408 ORTHO05D006790 1.6e-252 876.7 1029 52.7
Prupe.1G042300 Prunus persica HOM05D005408 ORTHO05D006790 4.6e-252 875.2 1018 52.4
Solyc09g090340.3 Solanum lycopersicum HOM05D005408 ORTHO05D006790 3.3e-250 869.0 1024 52.2
EL10Ac3g04981 Beta vulgaris HOM05D005408 ORTHO05D006790 4.8e-249 865.1 986 52.0
MD16G1222000 Malus domestica HOM05D005408 ORTHO05D006790 6.9e-248 861.3 1010 51.5
CSS0047984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 7.6e-247 857.8 1001 51.0
Haze_11418 Corylus avellana HOM05D005408 ORTHO05D006790 2.2e-246 856.3 983 51.6
TAR633G1608 Trochodendron aralioides HOM05D005408 ORTHO05D006790 2.2e-246 856.3 1018 49.2
QL06p019224 Quercus lobata HOM05D005408 ORTHO05D006790 3.8e-246 855.5 966 52.3
Nitab4.5_0000596g0060 Nicotiana tabacum HOM05D005408 ORTHO05D006790 1.6e-244 850.1 1095 48.0
Cfa014743 Carpinus fangiana HOM05D005408 ORTHO05D006790 2.7e-244 849.4 974 51.0
DCAR_024278 Daucus carota HOM05D005408 ORTHO05D006790 7.9e-244 847.8 982 51.0
Nitab4.5_0000044g0530 Nicotiana tabacum HOM05D005408 ORTHO05D006790 6.7e-243 844.7 1028 49.9
Sc19g0003230 Simmondsia chinensis HOM05D005408 ORTHO05D006790 3.3e-242 842.4 974 50.5
Duzib151G0888 Durio zibethinus HOM05D005408 ORTHO05D006790 9.7e-242 840.9 967 51.5
CSS0016984 Camellia sinensis var. sinensis HOM05D005408 ORTHO05D006790 1.3e-241 840.5 999 50.7
CiPaw.02G109300 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.6e-241 840.1 971 50.9
COL.COLO4_15917 Corchorus olitorius HOM05D005408 ORTHO05D006790 2.4e-240 836.3 967 51.7
Cc03_g05790 Coffea canephora HOM05D005408 ORTHO05D006790 6.9e-240 834.7 1025 50.9
MD13G1216600 Malus domestica HOM05D005408 ORTHO05D006790 6.9e-240 834.7 985 51.0
RcHm_v2.0_Chr4g0394291 Rosa chinensis HOM05D005408 ORTHO05D006790 3.4e-239 832.4 976 51.2
TAR362G0279 Trochodendron aralioides HOM05D005408 ORTHO05D006790 7.7e-239 831.2 1003 51.1
Duzib212G0761 Durio zibethinus HOM05D005408 ORTHO05D006790 2.9e-238 829.3 966 51.1
Migut.G00502 Erythranthe guttata HOM05D005408 ORTHO05D006790 4.2e-237 825.5 948 52.7
AUR62015544 Chenopodium quinoa HOM05D005408 ORTHO05D006790 1.6e-236 823.5 980 50.6
Ciclev10004264m.g Citrus clementina HOM05D005408 ORTHO05D006790 1.6e-236 823.5 963 51.6
Lj3A679T38 Lonicera japonica HOM05D005408 ORTHO05D006790 1.6e-236 823.5 1001 50.5
Atru.chr4.2004 Acer truncatum HOM05D005408 ORTHO05D006790 4.6e-236 822.0 963 51.1
FAN12G0827 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.0e-235 820.8 972 51.2
Potri.010G069200 Populus trichocarpa HOM05D005408 ORTHO05D006790 1.8e-235 820.1 973 52.3
FvH4_4g04020 Fragaria vesca HOM05D005408 ORTHO05D006790 8.8e-235 817.8 966 51.7
Lj3A684T25 Lonicera japonica HOM05D005408 ORTHO05D006790 1.5e-234 817.0 994 50.6
Potri.008G169200 Populus trichocarpa HOM05D005408 ORTHO05D006790 5.7e-234 815.1 969 52.0
FAN17G2537 Fragaria x ananassa HOM05D005408 ORTHO05D006790 6.3e-233 811.6 970 51.0
Rhsim02G0041600 Rhododendron simsii HOM05D005408 ORTHO05D006790 6.3e-233 811.6 1152 45.4
Manes.15G043200 Manihot esculenta HOM05D005408 ORTHO05D006790 1.4e-232 810.4 971 50.1
Hund03055 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.8e-232 810.1 994 48.0
ClCG05G004200 Citrullus lanatus HOM05D005408 ORTHO05D006790 3.1e-232 809.3 990 49.1
Gohir.A02G040500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 4.1e-232 808.9 975 50.6
TWI09G0385 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 2.0e-231 806.6 945 50.3
MELO3C006406.2 Cucumis melo HOM05D005408 ORTHO05D006790 1.0e-230 804.3 990 48.2
CsaV3_3G011930 Cucumis sativus L. HOM05D005408 ORTHO05D006790 1.0e-230 804.3 995 48.1
CARHR220500 Cardamine hirsuta HOM05D005408 ORTHO05D006790 2.2e-230 803.1 973 49.7
Cpa.g.sc44.32 Carica papaya HOM05D005408 ORTHO05D006790 1.4e-229 800.4 982 49.6
Gohir.D02G046500 Gossypium hirsutum HOM05D005408 ORTHO05D006790 1.9e-229 800.0 974 50.4
Nn1g02867 Nelumbo nucifera HOM05D005408 ORTHO05D006790 2.5e-229 799.7 1022 46.7
AUR62002164 Chenopodium quinoa HOM05D005408 ORTHO05D006790 3.2e-229 799.3 966 50.5
CiPaw.01G181400 Carya illinoinensis HOM05D005408 ORTHO05D006790 9.4e-229 797.7 948 50.5
vmacro15459 Vaccinium macrocarpon HOM05D005408 ORTHO05D006790 2.7e-228 796.2 1100 47.0
Aa31LG9G3050 Aethionema arabicum HOM05D005408 ORTHO05D006790 6.1e-228 795.0 936 49.3
Manes.15G043300 Manihot esculenta HOM05D005408 ORTHO05D006790 1.5e-226 790.4 980 48.5
Hma1.2p1_0112F.1_g054305 Hydrangea macrophylla HOM05D005408 ORTHO05D006790 2.6e-226 789.6 667 61.0
TWI53G1583 Tripterygium wilfordii HOM05D005408 ORTHO05D006790 1.3e-225 787.3 960 49.5
CANSAT54G2691 Cannabis sativa HOM05D005408 ORTHO05D006790 2.8e-225 786.2 970 49.2
SGA_v2.0_scaffold101G29731 Striga asiatica HOM05D005408 ORTHO05D006790 6.3e-225 785.0 956 50.1
Carub.0007s2798 Capsella rubella HOM05D005408 ORTHO05D006790 4.1e-224 782.3 959 48.6
Sabra10G0037900 Salix brachista HOM05D005408 ORTHO05D006790 5.3e-224 781.9 976 50.5
FAN22G0039 Fragaria x ananassa HOM05D005408 ORTHO05D006790 1.7e-222 776.9 1012 48.0
Aqoxy5G00183 Aquilegia oxysepala HOM05D005408 ORTHO05D006790 2.2e-222 776.5 1021 48.6
AT4G14310 Arabidopsis thaliana HOM05D005408 ORTHO05D006790 5.0e-222 775.4 962 47.9
Sed0026902 Sechium edule HOM05D005408 ORTHO05D006790 3.2e-221 772.7 957 47.6
Sabra08G0129000 Salix brachista HOM05D005408 ORTHO05D006790 5.5e-221 771.9 990 49.7
Sp7g12340 Schrenkiella parvula HOM05D005408 ORTHO05D006790 9.4e-221 771.2 931 48.8
Eucgr.H03018 Eucalyptus grandis HOM05D005408 ORTHO05D006790 1.6e-220 770.4 984 47.1
AL7G41950 Arabidopsis lyrata HOM05D005408 ORTHO05D006790 4.7e-220 768.8 906 49.6
Thhalv10024359m.g Eutrema salsugineum HOM05D005408 ORTHO05D006790 3.0e-219 766.1 907 49.7
ECA248G0134 Erigeron canadensis HOM05D005408 ORTHO05D006790 8.8e-219 764.6 958 49.2
HanXRQChr11g0330791 Helianthus annuus HOM05D005408 ORTHO05D006790 1.7e-217 760.4 941 47.9
arahy.Tifrunner.gnm1.ann1.HQEG75 Arachis hypogaea HOM05D005408 ORTHO05D006790 3.7e-217 759.2 945 48.4
arahy.Tifrunner.gnm1.ann1.NA4LRU Arachis hypogaea HOM05D005408 ORTHO05D006790 3.7e-217 759.2 980 47.3
PGR004G2334 Punica granatum HOM05D005408 ORTHO05D006790 8.2e-217 758.1 976 47.7
MSTRG.4147 Avicennia marina HOM05D005408 ORTHO05D006790 1.4e-216 757.3 940 49.4
Gorai.005G051300 Gossypium raimondii HOM05D005408 ORTHO05D006790 7.0e-216 755.0 913 51.0
Lalb_Chr03g0037341 Lupinus albus HOM05D005408 ORTHO05D006790 1.0e-214 751.1 981 46.9
Lj6g0021221 Lotus japonicus HOM05D005408 ORTHO05D006790 1.3e-214 750.7 695 58.0
BcaNung06103 Brassica carinata HOM05D005408 ORTHO05D006790 6.5e-214 748.4 960 46.9
PSO832G1937 Papaver somniferum HOM05D005408 ORTHO05D006790 1.5e-213 747.3 970 46.3
PSO210G0343 Papaver somniferum HOM05D005408 ORTHO05D006790 4.2e-213 745.7 976 47.4
MBI07_g31083_MAGBIO Magnolia biondii HOM05D005408 ORTHO05D006790 5.5e-213 745.3 1001 45.5
THA.LOC104804761 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 7.2e-213 745.0 970 47.1
Glyma.02G003800 Glycine max HOM05D005408 ORTHO05D006790 4.4e-210 735.7 655 59.1
C03p76860 Brassica napus HOM05D005408 ORTHO05D006790 1.7e-209 733.8 953 46.2
Phvul.007G275400 Phaseolus vulgaris HOM05D005408 ORTHO05D006790 2.8e-209 733.0 648 58.8
TPR.G25189 Trifolium pratense HOM05D005408 ORTHO05D006790 1.8e-208 730.3 719 55.6
THA.LOC104822240 Tarenaya hassleriana HOM05D005408 ORTHO05D006790 4.1e-208 729.2 980 46.8
VMungo0720G1073 Vigna mungo HOM05D005408 ORTHO05D006790 5.4e-208 728.8 651 57.8
BcaC01g00205 Brassica carinata HOM05D005408 ORTHO05D006790 9.1e-208 728.0 955 46.6
A08p24350 Brassica napus HOM05D005408 ORTHO05D006790 1.2e-207 727.6 951 46.1
Psat6g104520 Pisum sativum HOM05D005408 ORTHO05D006790 7.7e-207 724.9 677 56.9
Medtr1g041685 Medicago truncatula HOM05D005408 ORTHO05D006790 1.7e-206 723.8 676 56.8
Lsat_1_v5_gn_1_74661 Lactuca sativa HOM05D005408 ORTHO05D006790 1.1e-205 721.1 1003 47.4
Glyma.10G004700 Glycine max HOM05D005408 ORTHO05D006790 7.2e-205 718.4 697 55.8
BraA08t34390Z Brassica rapa HOM05D005408 ORTHO05D006790 2.8e-204 716.5 982 46.0
BolC3t19941H Brassica oleracea HOM05D005408 ORTHO05D006790 3.6e-204 716.1 973 44.9
Ca_03010_v3 Cicer arietinum L. HOM05D005408 ORTHO05D006790 1.4e-200 704.1 704 55.1
HanXRQChr01g0023201 Helianthus annuus HOM05D005408 ORTHO05D006790 6.4e-193 678.7 934 46.8
unitig_736.g22443 Utricularia gibba HOM05D005408 ORTHO05D006790 1.6e-180 637.5 870 46.1
Zm00001eb258510 Zea mays HOM05D005408 ORTHO05D006790 7.5e-178 628.6 681 49.9
Zm00001eb191660 Zea mays HOM05D005408 ORTHO05D006790 1.7e-177 627.5 679 49.9
ATR0736G089 Amborella trichopoda HOM05D005408 ORTHO05D006790 8.6e-174 615.1 721 49.7
CDE07G1006 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.4e-171 607.8 999 41.0
CDE04G2551 Ceratophyllum demersum HOM05D005408 ORTHO05D006790 1.5e-170 604.4 1047 40.6
SEGI_14734 Sequoiadendron giganteum HOM05D005408 ORTHO05D006790 2.5e-149 533.9 721 43.0
HPP92_008326 Vanilla planifolia HOM05D005408 ORTHO05D006790 1.1e-141 508.4 637 46.0
Ah.13g072600 Amaranthus hybridus HOM05D005408 ORTHO05D006790 6.1e-127 459.5 743 44.1
TPR.G25191 Trifolium pratense HOM05D005408 ORTHO05D006790 1.2e-119 435.3 650 40.6
Mapoly0063s0094 Marchantia polymorpha HOM05D005408 ORTHO05D006790 6.7e-102 376.3 606 35.5
Pp3c16_10130 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.0e-97 362.5 481 39.7
Os02g0809900 Oryza sativa ssp. japonica HOM05D005408 ORTHO05D006790 2.9e-97 360.9 292 56.8
Pp3c25_7300 Physcomitrium patens HOM05D005408 ORTHO05D006790 1.5e-96 358.6 818 32.3
AagrBONN_evm.TU.Sc2ySwM_228.3605 Anthoceros agrestis HOM05D005408 ORTHO05D006790 3.0e-86 324.3 577 34.8
SalBow8G3468 Salvia bowleyana HOM05D005408 ORTHO05D006790 6.0e-58 230.3 253 53.8
SalBow7G4774 Salvia bowleyana HOM05D005408 ORTHO05D006790 8.1e-55 219.9 253 52.6
CBR_g30942 Chara braunii HOM05D005408 ORTHO05D006790 9.9e-29 133.3 387 27.6
Rhsim02G0041700 Rhododendron simsii HOM05D005408 ORTHO05D006790 6.4e-28 130.6 186 43.5
Hund11908 Selenicereus undatus HOM05D005408 ORTHO05D006790 1.8e-25 122.5 151 49.0
CiPaw.06G041800 Carya illinoinensis HOM05D005408 ORTHO05D006790 1.8e-22 112.5 350 35.7
C04p41430 Brassica napus HOM05D005408 ORTHO05D006790 4.5e-13 81.3 124 44.4
BolC4t25724H Brassica oleracea HOM05D005408 ORTHO05D006790 5.9e-13 80.9 124 44.4
A04p07780 Brassica napus HOM05D005408 ORTHO05D006790 1.6e-10 72.8 80 53.8
BolC4t25725H Brassica oleracea HOM05D005408 ORTHO05D006790 4.6e-10 71.2 102 41.2
C04p41440 Brassica napus HOM05D005408 ORTHO05D006790 2.0e-08 65.9 102 40.2
BcaC02g09333 Brassica carinata HOM05D005408 ORTHO05D006790 2.5e-08 65.5 55 61.8


User provided reference genes

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