Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0548 Salvia bowleyana HOM05D006610 ORTHO05D008447 1.1e-110 403.3 208 100.0
SalBow3G0370 Salvia bowleyana HOM05D006610 ORTHO05D008447 8.8e-79 297.4 167 91.6
Migut.H00253 Erythranthe guttata HOM05D006610 ORTHO05D008447 6.3e-77 291.2 209 74.6
MSTRG.15312 Avicennia marina HOM05D006610 ORTHO05D008447 1.3e-74 283.5 208 73.6
SGA_v2.0_scaffold49G18127 Striga asiatica HOM05D006610 ORTHO05D008447 5.0e-74 281.6 210 72.9
TAR186G0001 Trochodendron aralioides HOM05D006610 ORTHO05D008447 2.8e-64 249.2 208 63.0
CSS0043605 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 1.4e-63 246.9 213 64.3
vmacro18433 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 5.2e-63 245.0 158 76.6
Actinidia28724 Actinidia chinensis HOM05D006610 ORTHO05D008447 6.8e-63 244.6 209 64.6
Rhsim08G0031200 Rhododendron simsii HOM05D006610 ORTHO05D008447 6.8e-63 244.6 210 64.3
Hund16514 Selenicereus undatus HOM05D006610 ORTHO05D008447 6.8e-63 244.6 210 63.3
Lj4A224G29 Lonicera japonica HOM05D006610 ORTHO05D008447 2.0e-62 243.0 161 75.8
CDE09G0967 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.4e-62 242.3 203 65.0
DCAR_014043 Daucus carota HOM05D006610 ORTHO05D008447 3.4e-62 242.3 206 63.6
HanXRQChr16g0531751 Helianthus annuus HOM05D006610 ORTHO05D008447 4.4e-62 241.9 214 61.7
GSVIVG01007223001 Vitis vinifera HOM05D006610 ORTHO05D008447 9.8e-62 240.7 213 63.8
COL.COLO4_22482 Corchorus olitorius HOM05D006610 ORTHO05D008447 2.2e-61 239.6 216 61.6
TWI09G0665 Tripterygium wilfordii HOM05D006610 ORTHO05D008447 4.9e-61 238.4 151 76.8
Gorai.003G006700 Gossypium raimondii HOM05D006610 ORTHO05D008447 8.3e-61 237.7 216 61.6
Hma1.2p1_0315F.1_g122440 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 8.3e-61 237.7 216 63.0
CsaV3_3G000580 Cucumis sativus L. HOM05D006610 ORTHO05D008447 1.1e-60 237.3 214 60.7
Manes.02G109300 Manihot esculenta HOM05D006610 ORTHO05D008447 1.1e-60 237.3 217 61.8
Nitab4.5_0001789g0060 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.4e-60 236.9 147 78.2
PGSC0003DMG400003653 Solanum tuberosum HOM05D006610 ORTHO05D008447 1.4e-60 236.9 212 62.7
Duzib187G1817 Durio zibethinus HOM05D006610 ORTHO05D008447 1.8e-60 236.5 218 63.3
MELO3C013747.2 Cucumis melo HOM05D006610 ORTHO05D008447 2.4e-60 236.1 216 60.2
Gohir.D03G006400 Gossypium hirsutum HOM05D006610 ORTHO05D008447 3.1e-60 235.7 201 63.7
Sed0015497 Sechium edule HOM05D006610 ORTHO05D008447 3.1e-60 235.7 218 60.6
THA.LOC104819168 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 4.1e-60 235.3 184 65.8
Gohir.A02G173500 Gossypium hirsutum HOM05D006610 ORTHO05D008447 5.4e-60 235.0 151 76.2
Atru.chr3.883 Acer truncatum HOM05D006610 ORTHO05D008447 7.0e-60 234.6 215 61.4
Atru.chr3.894 Acer truncatum HOM05D006610 ORTHO05D008447 7.0e-60 234.6 215 61.4
AUR62003705 Chenopodium quinoa HOM05D006610 ORTHO05D008447 7.0e-60 234.6 150 76.7
Cpa.g.sc6.302 Carica papaya HOM05D006610 ORTHO05D008447 1.2e-59 233.8 217 61.8
Peaxi162Scf00328g00315 Petunia axillaris HOM05D006610 ORTHO05D008447 1.2e-59 233.8 147 76.9
Sopen02g028290 Solanum pennellii HOM05D006610 ORTHO05D008447 1.2e-59 233.8 210 62.4
AUR62018012 Chenopodium quinoa HOM05D006610 ORTHO05D008447 1.6e-59 233.4 192 65.6
Nitab4.5_0008552g0010 Nicotiana tabacum HOM05D006610 ORTHO05D008447 1.6e-59 233.4 219 61.2
Potri.005G109100 Populus trichocarpa HOM05D006610 ORTHO05D008447 1.6e-59 233.4 149 75.8
Sabra05G0089400 Salix brachista HOM05D006610 ORTHO05D008447 1.6e-59 233.4 222 59.5
ECA246G3062 Erigeron canadensis HOM05D006610 ORTHO05D008447 2.0e-59 233.0 208 62.5
Cc07_g11190 Coffea canephora HOM05D006610 ORTHO05D008447 2.7e-59 232.6 210 63.3
Psat4g102280 Pisum sativum HOM05D006610 ORTHO05D008447 2.7e-59 232.6 198 60.6
RcHm_v2.0_Chr2g0098651 Rosa chinensis HOM05D006610 ORTHO05D008447 2.7e-59 232.6 205 60.0
CAN.G890.6 Capsicum annuum HOM05D006610 ORTHO05D008447 3.5e-59 232.3 209 62.7
CDE02G2830 Ceratophyllum demersum HOM05D006610 ORTHO05D008447 3.5e-59 232.3 152 75.7
Aqoxy6G02108 Aquilegia oxysepala HOM05D006610 ORTHO05D008447 4.5e-59 231.9 151 73.5
PGR119G0279 Punica granatum HOM05D006610 ORTHO05D008447 4.5e-59 231.9 151 72.8
Prupe.7G173500 Prunus persica HOM05D006610 ORTHO05D008447 7.8e-59 231.1 219 59.8
Solyc02g083500.3 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.0e-58 230.7 211 61.6
TPR.G19505 Trifolium pratense HOM05D006610 ORTHO05D008447 1.0e-58 230.7 208 60.1
Ciclev10026475m.g Citrus clementina HOM05D006610 ORTHO05D008447 1.7e-58 229.9 193 64.2
Eucgr.I02316 Eucalyptus grandis HOM05D006610 ORTHO05D008447 1.7e-58 229.9 221 59.3
Glyma.16G123000 Glycine max HOM05D006610 ORTHO05D008447 1.7e-58 229.9 172 65.1
MD02G1124800 Malus domestica HOM05D006610 ORTHO05D008447 1.7e-58 229.9 205 61.0
CSS0036095 Camellia sinensis var. sinensis HOM05D006610 ORTHO05D008447 2.3e-58 229.6 208 61.5
Medtr8g075110 Medicago truncatula HOM05D006610 ORTHO05D008447 5.0e-58 228.4 185 63.2
EL10Ac6g15167 Beta vulgaris HOM05D006610 ORTHO05D008447 6.6e-58 228.0 150 74.0
Cfa007018 Carpinus fangiana HOM05D006610 ORTHO05D008447 6.6e-58 228.0 233 57.5
Haze_03713 Corylus avellana HOM05D006610 ORTHO05D008447 6.6e-58 228.0 214 61.2
Lalb_Chr16g0391471 Lupinus albus HOM05D006610 ORTHO05D008447 6.6e-58 228.0 208 58.7
Phvul.003G266300 Phaseolus vulgaris HOM05D006610 ORTHO05D008447 1.5e-57 226.9 211 58.3
arahy.Tifrunner.gnm1.ann1.UN150X Arachis hypogaea HOM05D006610 ORTHO05D008447 4.3e-57 225.3 215 57.2
FAN19G1298 Fragaria x ananassa HOM05D006610 ORTHO05D008447 4.3e-57 225.3 151 73.5
AUR62034480 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.6e-57 224.9 132 81.1
VMungo0251G0375 Vigna mungo HOM05D006610 ORTHO05D008447 5.6e-57 224.9 211 57.3
Lj4g0021807 Lotus japonicus HOM05D006610 ORTHO05D008447 7.3e-57 224.6 204 60.8
unitig_736.g22562 Utricularia gibba HOM05D006610 ORTHO05D008447 7.3e-57 224.6 171 70.8
arahy.Tifrunner.gnm1.ann1.M7YZEH Arachis hypogaea HOM05D006610 ORTHO05D008447 1.2e-56 223.8 212 56.1
ATR0180G027 Amborella trichopoda HOM05D006610 ORTHO05D008447 1.6e-56 223.4 150 72.7
FAN28G2812 Fragaria x ananassa HOM05D006610 ORTHO05D008447 6.1e-56 221.5 219 58.4
FAN23G0795 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.4e-55 220.3 157 72.0
THA.LOC104821342 Tarenaya hassleriana HOM05D006610 ORTHO05D008447 2.3e-55 219.5 179 63.7
AL8G45500 Arabidopsis lyrata HOM05D006610 ORTHO05D008447 3.1e-55 219.2 151 71.5
Nn6g31943 Nelumbo nucifera HOM05D006610 ORTHO05D008447 3.1e-55 219.2 130 82.3
CANSAT01G0612 Cannabis sativa HOM05D006610 ORTHO05D008447 4.0e-55 218.8 197 58.9
Sp2g30600 Schrenkiella parvula HOM05D006610 ORTHO05D008447 1.5e-54 216.9 202 59.9
Os09g0541700 Oryza sativa ssp. japonica HOM05D006610 ORTHO05D008447 4.4e-54 215.3 208 57.2
Carub.0008s2842 Capsella rubella HOM05D006610 ORTHO05D008447 9.8e-54 214.2 154 68.8
AT5G66090 Arabidopsis thaliana HOM05D006610 ORTHO05D008447 2.9e-53 212.6 211 57.3
Gohir.D11G179450 Gossypium hirsutum HOM05D006610 ORTHO05D008447 4.9e-53 211.8 147 72.1
ClCG10G000510 Citrullus lanatus HOM05D006610 ORTHO05D008447 8.3e-53 211.1 224 53.6
MBI05_g19586_MAGBIO Magnolia biondii HOM05D006610 ORTHO05D008447 1.1e-52 210.7 128 78.9
A02p44620 Brassica napus HOM05D006610 ORTHO05D008447 1.4e-52 210.3 152 68.4
BraA02t09378Z Brassica rapa HOM05D006610 ORTHO05D008447 1.4e-52 210.3 152 68.4
PSO170G5432 Papaver somniferum HOM05D006610 ORTHO05D008447 3.2e-52 209.1 138 73.9
Lsat_1_v5_gn_3_71540 Lactuca sativa HOM05D006610 ORTHO05D008447 7.0e-52 208.0 136 75.0
CARHR281660 Cardamine hirsuta HOM05D006610 ORTHO05D008447 1.2e-51 207.2 152 68.4
FAN26G1933 Fragaria x ananassa HOM05D006610 ORTHO05D008447 1.6e-51 206.8 211 57.8
Thhalv10004913m.g Eutrema salsugineum HOM05D006610 ORTHO05D008447 2.0e-51 206.5 149 68.5
BolC2t12560H Brassica oleracea HOM05D006610 ORTHO05D008447 2.7e-51 206.1 194 58.8
AagrBONN_evm.TU.Sc2ySwM_369.589 Anthoceros agrestis HOM05D006610 ORTHO05D008447 5.0e-50 201.8 133 69.2
SEGI_37776 Sequoiadendron giganteum HOM05D006610 ORTHO05D008447 5.0e-50 201.8 151 61.6
Gorai.007G191500 Gossypium raimondii HOM05D006610 ORTHO05D008447 1.1e-49 200.7 194 59.8
AUR62018013 Chenopodium quinoa HOM05D006610 ORTHO05D008447 5.6e-49 198.4 192 58.9
Pp3c9_6630 Physcomitrium patens HOM05D006610 ORTHO05D008447 8.0e-48 194.5 134 67.9
Aa31LG1G14570 Aethionema arabicum HOM05D006610 ORTHO05D008447 1.8e-47 193.4 202 55.0
Oeu000676.1 Olea europaea HOM05D006610 ORTHO05D008447 1.5e-46 190.3 108 88.0
QL06p051388 Quercus lobata HOM05D006610 ORTHO05D008447 5.8e-46 188.3 111 82.9
SMO361G0750 Selaginella moellendorffii HOM05D004797 ORTHO05D005752 8.3e-45 184.5 132 65.2
Duzib147G1005 Durio zibethinus HOM05D006610 ORTHO05D008447 1.3e-42 177.2 176 57.4
Hma1.2p1_3766F.1_g337520 Hydrangea macrophylla HOM05D006610 ORTHO05D008447 3.9e-42 175.6 110 80.0
Lsat_1_v5_gn_2_20941 Lactuca sativa HOM05D006610 ORTHO05D008447 1.1e-36 157.5 107 72.9
Dinv08559 Davidia involucrata HOM05D006610 ORTHO05D008447 2.0e-30 136.7 72 90.3
Nn5g30811 Nelumbo nucifera HOM05D006610 ORTHO05D008447 3.5e-27 125.9 130 55.4
Sc03g0003740 Simmondsia chinensis HOM05D006610 ORTHO05D008447 4.6e-27 125.6 133 54.1
Cre15.g638400 Chlamydomonas reinhardtii HOM05D006610 ORTHO05D008447 1.3e-26 124.0 142 43.0
Thecc.01G013000 Theobroma cacao HOM05D006610 ORTHO05D008447 8.7e-26 121.3 151 50.3
HPP92_025898 Vanilla planifolia HOM05D006610 ORTHO05D008447 1.5e-25 120.6 96 56.2
FvH4_1g11240 Fragaria vesca HOM05D006610 ORTHO05D008447 3.3e-25 119.4 93 61.3
Gohir.A11G172600 Gossypium hirsutum HOM05D006610 ORTHO05D008447 1.2e-24 117.5 133 50.4
BcaC07g37739 Brassica carinata HOM05D006610 ORTHO05D008447 1.5e-22 110.5 68 79.4
BolC8t48119H Brassica oleracea HOM05D006610 ORTHO05D008447 1.5e-22 110.5 68 79.4
vmacro18432 Vaccinium macrocarpon HOM05D006610 ORTHO05D008447 1.4e-15 87.4 58 69.0
Solyc02g083525.1 Solanum lycopersicum HOM05D006610 ORTHO05D008447 1.9e-12 77.0 52 73.1


User provided reference genes

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