Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0463 Salvia bowleyana HOM05D014524 ORTHO05D006541 2.1e-48 195.3 94 100.0
SalBow3G3100 Salvia bowleyana HOM05D014524 ORTHO05D006541 2.5e-41 171.8 84 97.6
SalBow8G4971 Salvia bowleyana HOM05D014524 ORTHO05D006541 2.6e-14 82.0 45 88.9
Migut.N00307 Erythranthe guttata HOM05D014524 ORTHO05D006541 2.7e-11 72.0 42 71.4
SalBow4G0482 Salvia bowleyana HOM05D014524 ORTHO05D006541 2.3e-10 68.9 33 97.0
MSTRG.14227 Avicennia marina HOM05D014524 ORTHO05D006541 2.0e-09 65.9 44 68.2
SalBow4G1324 Salvia bowleyana HOM05D014524 ORTHO05D006541 9.7e-09 63.5 33 87.9
Manes.03G156600 Manihot esculenta HOM05D008171 ORTHO05D006541 2.8e-08 62.0 32 84.4
Oeu061870.1 Olea europaea HOM05D008729 ORTHO05D006541 4.8e-08 61.2 40 67.5
Cc03_g06490 Coffea canephora HOM05D008171 ORTHO05D006541 6.3e-08 60.8 32 81.2
SGA_v2.0_scaffold31G12622 Striga asiatica HOM05D014524 ORTHO05D006541 6.3e-08 60.8 37 70.3
Sabra18G0128500 Salix brachista HOM05D008171 ORTHO05D006541 1.8e-07 59.3 36 69.4
SGA_v2.0_scaffold577G53017 Striga asiatica HOM05D014524 ORTHO05D006541 1.8e-07 59.3 42 61.9
Dinv43748 Davidia involucrata HOM05D008729 ORTHO05D006541 2.4e-07 58.9 30 83.3
TWI09G0902 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 2.4e-07 58.9 29 82.8
COL.COLO4_08914 Corchorus olitorius HOM05D008171 ORTHO05D006541 3.1e-07 58.5 41 63.4
Gohir.A11G241700 Gossypium hirsutum HOM05D008171 ORTHO05D006541 4.1e-07 58.2 41 63.4
Gohir.D11G251100 Gossypium hirsutum HOM05D008171 ORTHO05D006541 4.1e-07 58.2 41 63.4
Gorai.007G269300 Gossypium raimondii HOM05D008171 ORTHO05D006541 4.1e-07 58.2 41 63.4
Potri.018G147100 Populus trichocarpa HOM05D008729 ORTHO05D006541 5.3e-07 57.8 40 62.5
PGSC0003DMG400000820 Solanum tuberosum HOM05D008171 ORTHO05D006541 6.9e-07 57.4 44 59.1
Cfa014809 Carpinus fangiana HOM05D008171 ORTHO05D006541 9.1e-07 57.0 48 56.2
COL.COLO4_37412 Corchorus olitorius HOM05D008171 ORTHO05D006541 9.1e-07 57.0 41 61.0
Sopen05g005780 Solanum pennellii HOM05D008171 ORTHO05D006541 1.2e-06 56.6 33 75.8
Atru.chr3.807 Acer truncatum HOM05D008171 ORTHO05D006541 1.5e-06 56.2 39 61.5
COL.COLO4_36427 Corchorus olitorius HOM05D008171 ORTHO05D006541 2.0e-06 55.8 34 64.7
Hma1.2p1_1240F.1_g269530 Hydrangea macrophylla HOM05D008729 ORTHO05D006541 2.6e-06 55.5 51 54.9
Rhsim06G0142400 Rhododendron simsii HOM05D008729 ORTHO05D006541 2.6e-06 55.5 29 82.8
TWI09G1485 Tripterygium wilfordii HOM05D008171 ORTHO05D006541 3.4e-06 55.1 30 76.7
Actinidia31699 Actinidia chinensis HOM05D008171 ORTHO05D006541 4.5e-06 54.7 31 71.0
Thecc.05G282200 Theobroma cacao HOM05D008171 ORTHO05D006541 5.9e-06 54.3 45 55.6
Duzib177G0581 Durio zibethinus HOM05D008171 ORTHO05D006541 7.7e-06 53.9 34 70.6
PGR119G2083 Punica granatum HOM05D008729 ORTHO05D006541 7.7e-06 53.9 32 65.6


User provided reference genes

Program Settings