Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0306 Salvia bowleyana HOM05D008110 ORTHO05D000088 6.8e-101 370.5 173 100.0
MSTRG.17812 Avicennia marina HOM05D008110 ORTHO05D000088 2.4e-21 106.3 304 24.3
Migut.N02603 Erythranthe guttata HOM05D008110 ORTHO05D000088 1.6e-17 93.6 372 22.6
GSVIVG01031853001 Vitis vinifera HOM05D008110 ORTHO05D005106 4.7e-17 92.0 227 26.0
TWI31G0648 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 5.7e-15 85.1 242 25.6
Cc00_g00220 Coffea canephora HOM05D008110 ORTHO05D000088 1.8e-13 80.1 293 20.1
PGSC0003DMG401025831 Solanum tuberosum HOM05D008110 ORTHO05D000088 3.1e-13 79.3 73 43.8
PGSC0003DMG402025831 Solanum tuberosum HOM05D004388 ORTHO05D005106 3.1e-13 79.3 73 43.8
CAN.G322.83 Capsicum annuum HOM05D008110 ORTHO05D000088 1.2e-12 77.4 87 42.5
Dinv42109 Davidia involucrata HOM05D008110 ORTHO05D000088 1.6e-12 77.0 265 21.9
CAN.G241.1 Capsicum annuum HOM05D008110 ORTHO05D000088 2.0e-12 76.6 83 41.0
Hma1.2p1_1527F.1_g289060 Hydrangea macrophylla HOM05D008110 ORTHO05D000088 3.5e-12 75.9 102 33.3
Oeu003285.1 Olea europaea HOM05D008110 ORTHO05D000088 4.5e-12 75.5 89 38.2
Peaxi162Scf00016g01351 Petunia axillaris HOM05D008110 ORTHO05D000088 7.7e-12 74.7 73 42.5
Cc00_g00230 Coffea canephora HOM05D008110 ORTHO05D000088 1.3e-11 73.9 84 36.9
DCAR_022075 Daucus carota HOM05D008110 ORTHO05D000088 1.3e-11 73.9 273 19.8
Sopen01g048640 Solanum pennellii HOM05D008110 ORTHO05D000088 2.2e-11 73.2 73 41.1
PGSC0003DMG400010668 Solanum tuberosum HOM05D008110 ORTHO05D000088 2.2e-11 73.2 73 41.1
SGA_v2.0_scaffold223G42874 Striga asiatica HOM05D008110 ORTHO05D000088 2.9e-11 72.8 69 37.7
Actinidia12967 Actinidia chinensis HOM05D008110 ORTHO05D000088 5.0e-11 72.0 74 39.2
Sopen02g009350 Solanum pennellii HOM05D008110 ORTHO05D000088 5.0e-11 72.0 305 20.7
CSS0024769 Camellia sinensis var. sinensis HOM05D008110 ORTHO05D000088 8.5e-11 71.2 125 30.4
Solyc01g106250.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 8.5e-11 71.2 73 39.7
Migut.N02605 Erythranthe guttata HOM05D008110 ORTHO05D000088 1.1e-10 70.9 101 38.6
CAN.G504.44 Capsicum annuum HOM05D000185 ORTHO05D000105 1.5e-10 70.5 102 34.3
Nitab4.5_0001401g0140 Nicotiana tabacum HOM05D008110 ORTHO05D000088 1.5e-10 70.5 82 32.9
Migut.J01193 Erythranthe guttata HOM05D008110 ORTHO05D000088 1.9e-10 70.1 82 39.0
PGSC0003DMG400044725 Solanum tuberosum HOM05D008110 ORTHO05D000088 2.5e-10 69.7 149 26.8
Nitab4.5_0008194g0010 Nicotiana tabacum HOM05D008110 ORTHO05D000088 3.2e-10 69.3 90 33.3
PGR102G2553 Punica granatum HOM05D000823 ORTHO05D000088 3.2e-10 69.3 216 20.8
Solyc01g109030.4 Solanum lycopersicum HOM05D008110 ORTHO05D000088 4.2e-10 68.9 70 40.0
PGSC0003DMG400037529 Solanum tuberosum HOM05D008110 ORTHO05D000088 4.2e-10 68.9 60 45.0
Prupe.1G388000 Prunus persica HOM05D000823 ORTHO05D000088 5.5e-10 68.6 185 25.9
Rhsim11G0170700 Rhododendron simsii HOM05D008110 ORTHO05D000088 9.4e-10 67.8 80 35.0
Solyc02g026080.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 9.4e-10 67.8 89 38.2
CSS0000969 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 1.2e-09 67.4 73 37.0
CSS0025372 Camellia sinensis var. sinensis HOM05D000823 ORTHO05D000088 1.2e-09 67.4 73 37.0
PSO675G8304 Papaver somniferum HOM05D000395 ORTHO05D000088 1.6e-09 67.0 223 22.0
Sopen01g051160 Solanum pennellii HOM05D008110 ORTHO05D000088 1.6e-09 67.0 67 37.3
TAR628G1487 Trochodendron aralioides HOM05D000823 ORTHO05D000088 1.6e-09 67.0 71 38.0
Ah.01g019890 Amaranthus hybridus HOM05D001349 ORTHO05D001980 4.7e-09 65.5 70 41.4
Atru.chr5.2872 Acer truncatum HOM05D000823 ORTHO05D000088 6.1e-09 65.1 68 39.7
CSS0005810 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 6.1e-09 65.1 71 38.0
CAN.G192.15 Capsicum annuum HOM05D008110 ORTHO05D000088 8.0e-09 64.7 76 34.2
EL10Ac9g21796 Beta vulgaris HOM05D000823 ORTHO05D000088 1.0e-08 64.3 78 37.2
CSS0012563 Camellia sinensis var. sinensis HOM05D000395 ORTHO05D000088 1.4e-08 63.9 157 28.0
Eucgr.A01956 Eucalyptus grandis HOM05D008110 ORTHO05D000088 1.4e-08 63.9 78 33.3
Gohir.D09G086300 Gossypium hirsutum HOM05D000823 ORTHO05D000088 1.4e-08 63.9 216 22.2
DCAR_029047 Daucus carota HOM05D000823 ORTHO05D000088 1.8e-08 63.5 102 34.3
Lj7C16G12 Lonicera japonica HOM05D000395 ORTHO05D000088 1.8e-08 63.5 96 32.3
Rhsim10G0125600 Rhododendron simsii HOM05D000823 ORTHO05D000088 2.3e-08 63.2 73 32.9
TWI75G0037 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 2.3e-08 63.2 70 40.0
Lj7C19G3 Lonicera japonica HOM05D000395 ORTHO05D000088 3.0e-08 62.8 96 32.3
TWI31G0651 Tripterygium wilfordii HOM05D000823 ORTHO05D000088 3.0e-08 62.8 65 38.5
TAR625G0462 Trochodendron aralioides HOM05D000823 ORTHO05D000088 3.0e-08 62.8 236 21.2
Solyc05g041100.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 4.0e-08 62.4 95 32.6
FvH4_7g01780 Fragaria vesca HOM05D000823 ORTHO05D000088 5.2e-08 62.0 179 22.3
FAN06G1437 Fragaria x ananassa HOM05D000823 ORTHO05D000088 5.2e-08 62.0 179 22.3
EL10Ac8g19102 Beta vulgaris HOM05D000823 ORTHO05D000088 6.8e-08 61.6 148 22.3
Sopen05g025010 Solanum pennellii HOM05D008110 ORTHO05D000088 6.8e-08 61.6 95 32.6
Atru.chr9.727 Acer truncatum HOM05D008110 ORTHO05D000088 8.8e-08 61.2 66 37.9
Lj7C16T11 Lonicera japonica HOM05D000395 ORTHO05D000088 1.2e-07 60.8 106 30.2
SalBow7G1050 Salvia bowleyana HOM05D008110 ORTHO05D000088 1.2e-07 60.8 106 35.8
vmacro05287 Vaccinium macrocarpon HOM05D000823 ORTHO05D000088 1.2e-07 60.8 73 32.9
CAN.G322.59 Capsicum annuum HOM05D008110 ORTHO05D000088 1.5e-07 60.5 67 38.8
Gorai.006G102500 Gossypium raimondii HOM05D000823 ORTHO05D000088 1.5e-07 60.5 218 22.5
Manes.10G033500 Manihot esculenta HOM05D000395 ORTHO05D000088 2.0e-07 60.1 124 29.8
Solyc01g108950.3 Solanum lycopersicum HOM05D008110 ORTHO05D000088 2.0e-07 60.1 88 34.1
PGSC0003DMG400036386 Solanum tuberosum HOM05D008110 ORTHO05D000088 2.0e-07 60.1 73 35.6
Solyc01g108940.2 Solanum lycopersicum HOM05D008110 ORTHO05D000088 2.6e-07 59.7 65 32.3
AT4G31640 Arabidopsis thaliana HOM05D000888 ORTHO05D000740 4.4e-07 58.9 190 24.2
Lj2A601G13 Lonicera japonica HOM05D000395 ORTHO05D000088 4.4e-07 58.9 118 31.4
Oeu003288.1 Olea europaea HOM05D008110 ORTHO05D000088 4.4e-07 58.9 50 48.0
Sopen01g051220 Solanum pennellii HOM05D008110 ORTHO05D000088 5.7e-07 58.5 50 46.0
Sopen02g006830 Solanum pennellii HOM05D008110 ORTHO05D000088 5.7e-07 58.5 67 35.8
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 5.7e-07 58.5 77 35.1
Lj6C562T8 Lonicera japonica HOM05D000823 ORTHO05D000088 7.5e-07 58.2 71 33.8
Lj2A600T56 Lonicera japonica HOM05D000395 ORTHO05D000088 9.8e-07 57.8 73 35.6
PGSC0003DMG400005934 Solanum tuberosum HOM05D000823 ORTHO05D000088 9.8e-07 57.8 71 33.8
Dinv26761 Davidia involucrata HOM05D000395 ORTHO05D000088 1.7e-06 57.0 73 31.5
Oeu064572.1 Olea europaea HOM05D000888 ORTHO05D000740 1.7e-06 57.0 180 23.3
Sopen06g030390 Solanum pennellii HOM05D000823 ORTHO05D000088 1.7e-06 57.0 71 33.8
Aqoxy6G00935 Aquilegia oxysepala HOM05D000823 ORTHO05D000088 2.8e-06 56.2 71 29.6
Duzib264G0448 Durio zibethinus HOM05D000823 ORTHO05D000088 2.8e-06 56.2 66 34.8
Lj2C600G8 Lonicera japonica HOM05D000395 ORTHO05D000088 2.8e-06 56.2 84 34.5
QL10p039053 Quercus lobata HOM05D000395 ORTHO05D000088 3.7e-06 55.8 85 28.2
vmacro16013 Vaccinium macrocarpon HOM05D000395 ORTHO05D000088 3.7e-06 55.8 71 33.8
VMungo0540G0559 Vigna mungo HOM05D000823 ORTHO05D000088 3.7e-06 55.8 105 29.5
Dinv26764 Davidia involucrata HOM05D000823 ORTHO05D000088 4.9e-06 55.5 71 33.8
FAN03G0739 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.9e-06 55.5 170 23.5
FAN04G2451 Fragaria x ananassa HOM05D000823 ORTHO05D000088 4.9e-06 55.5 71 35.2
Lj2A565G28 Lonicera japonica HOM05D000395 ORTHO05D000088 4.9e-06 55.5 72 33.3
PGSC0003DMG400045703 Solanum tuberosum HOM05D008110 ORTHO05D000088 4.9e-06 55.5 60 35.0
Nn5g29405 Nelumbo nucifera HOM05D000823 ORTHO05D000088 6.3e-06 55.1 91 29.7
RcHm_v2.0_Chr2g0103411 Rosa chinensis HOM05D000395 ORTHO05D000088 6.3e-06 55.1 72 31.9
SGA_v2.0_scaffold54G19506 Striga asiatica HOM05D008110 ORTHO05D000088 6.3e-06 55.1 267 20.2
RcHm_v2.0_Chr1g0319011 Rosa chinensis HOM05D000823 ORTHO05D000088 8.3e-06 54.7 183 24.0


User provided reference genes

Program Settings