Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0301 Salvia bowleyana HOM05D011410 ORTHO05D013015 1.1e-84 316.6 168 100.0
MSTRG.10815 Avicennia marina HOM05D011410 ORTHO05D013015 1.7e-40 169.9 169 54.4
Migut.K00088 Erythranthe guttata HOM05D011410 ORTHO05D013015 1.4e-29 133.7 144 47.2
Nitab4.5_0000360g0070 Nicotiana tabacum HOM05D011410 ORTHO05D013015 3.4e-12 75.9 112 35.7
Nitab4.5_0000070g0260 Nicotiana tabacum HOM05D011410 ORTHO05D013015 9.8e-12 74.3 110 41.8
Peaxi162Scf00089g01410 Petunia axillaris HOM05D011410 ORTHO05D013015 1.7e-11 73.6 161 29.2
CAN.G111.34 Capsicum annuum HOM05D011410 ORTHO05D013015 6.4e-11 71.6 162 29.6
CAN.G111.35 Capsicum annuum HOM05D011410 ORTHO05D013015 1.4e-10 70.5 135 33.3
Haze_03215 Corylus avellana HOM05D003146 ORTHO05D001819 3.2e-10 69.3 142 38.0
THA.LOC104802649 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.1e-10 68.9 172 29.1
QL06p013378 Quercus lobata HOM05D003146 ORTHO05D001819 7.0e-10 68.2 179 28.5
PGSC0003DMG400009677 Solanum tuberosum HOM05D011410 ORTHO05D013015 7.0e-10 68.2 105 36.2
CARHR092490 Cardamine hirsuta HOM05D003146 ORTHO05D001819 5.9e-09 65.1 176 26.1
QL04p007223 Quercus lobata HOM05D003146 ORTHO05D001819 5.9e-09 65.1 146 34.9
Solyc06g005460.1 Solanum lycopersicum HOM05D011410 ORTHO05D013015 1.3e-08 63.9 114 32.5
THA.LOC104802648 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 1.3e-08 63.9 162 28.4
QL06p013377 Quercus lobata HOM05D003146 ORTHO05D001819 2.3e-08 63.2 175 28.6
Glyma.15G207000 Glycine max HOM05D007995 ORTHO05D001819 3.9e-08 62.4 129 32.6
Glyma.15G207100 Glycine max HOM05D007995 ORTHO05D001819 3.9e-08 62.4 129 32.6
MELO3C019867.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.6e-08 61.6 162 24.7
MELO3C028017.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.9e-07 60.1 162 24.1
MELO3C000643.2 Cucumis melo HOM05D003146 ORTHO05D001819 2.5e-07 59.7 170 25.3
MELO3C001332.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.3e-07 58.9 159 24.5
MELO3C028122.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.3e-07 58.9 159 24.5
CsaV3_UNG225750 Cucumis sativus L. HOM05D003146 ORTHO05D001819 4.3e-07 58.9 159 23.9
THA.LOC104803096 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.3e-07 58.9 181 27.1
THA.LOC104808963 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 4.3e-07 58.9 120 31.7
CAN.G363.37 Capsicum annuum HOM05D009438 ORTHO05D010870 5.6e-07 58.5 173 31.2
Migut.M01954 Erythranthe guttata HOM05D009438 ORTHO05D010870 5.6e-07 58.5 148 27.7
MELO3C025842.2 Cucumis melo HOM05D003146 ORTHO05D001819 7.3e-07 58.2 157 24.2
CsaV3_UNG084670 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.3e-07 58.2 165 24.2
CsaV3_UNG132030 Cucumis sativus L. HOM05D003146 ORTHO05D001819 7.3e-07 58.2 165 24.2
Rhsim04G0243500 Rhododendron simsii HOM05D031363 ORTHO05D037310 7.3e-07 58.2 147 29.3
Rhsim04G0243800 Rhododendron simsii HOM05D031363 ORTHO05D013015 7.3e-07 58.2 147 29.3
THA.LOC104825373 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 7.3e-07 58.2 108 31.5
MELO3C019860.2 Cucumis melo HOM05D003146 ORTHO05D001819 9.5e-07 57.8 162 25.3
Rhsim04G0235800 Rhododendron simsii HOM05D000862 ORTHO05D003588 9.5e-07 57.8 146 30.1
Rhsim04G0238300 Rhododendron simsii HOM05D000862 ORTHO05D003588 9.5e-07 57.8 146 30.1
Solyc01g097660.2 Solanum lycopersicum HOM05D011410 ORTHO05D013015 9.5e-07 57.8 121 32.2
THA.LOC104816708 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 9.5e-07 57.8 108 31.5
THA.LOC104817105 Tarenaya hassleriana HOM05D003146 ORTHO05D001819 9.5e-07 57.8 108 31.5
MELO3C000722.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-06 57.4 162 25.3
MELO3C030064.2 Cucumis melo HOM05D003146 ORTHO05D001819 1.2e-06 57.4 162 24.7
CsaV3_2G000020 Cucumis sativus L. HOM05D003146 ORTHO05D001819 1.2e-06 57.4 155 23.9
TWI32G0174 Tripterygium wilfordii HOM05D026721 ORTHO05D001819 1.2e-06 57.4 143 27.3
CAN.G111.37 Capsicum annuum HOM05D011410 ORTHO05D013015 1.6e-06 57.0 170 25.3
AL3G30250 Arabidopsis lyrata HOM05D003146 ORTHO05D001819 2.1e-06 56.6 165 22.4
Sopen01g041270 Solanum pennellii HOM05D011410 ORTHO05D013015 2.1e-06 56.6 118 29.7
CAN.G111.36 Capsicum annuum HOM05D011410 ORTHO05D013015 2.8e-06 56.2 109 30.3
Peaxi162Scf00126g10015 Petunia axillaris HOM05D003146 ORTHO05D001819 2.8e-06 56.2 169 27.2
QL04p007240 Quercus lobata HOM05D003146 ORTHO05D001819 2.8e-06 56.2 176 30.1
TWI09G0175 Tripterygium wilfordii HOM05D003146 ORTHO05D001819 2.8e-06 56.2 135 31.1
ClCG06G004590 Citrullus lanatus HOM05D003146 ORTHO05D001819 3.6e-06 55.8 140 28.6
MELO3C034932.2 Cucumis melo HOM05D003146 ORTHO05D001819 3.6e-06 55.8 157 24.2
QL04p005674 Quercus lobata HOM05D003146 ORTHO05D001819 3.6e-06 55.8 166 27.7
Sp3g15430 Schrenkiella parvula HOM05D003146 ORTHO05D001819 3.6e-06 55.8 171 22.8
PGSC0003DMG400034620 Solanum tuberosum HOM05D003146 ORTHO05D001819 3.6e-06 55.8 146 27.4
Ca_06775_v3 Cicer arietinum L. HOM05D007995 ORTHO05D001819 4.7e-06 55.5 113 31.9
MELO3C019866.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-06 55.5 162 22.8
MELO3C030075.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-06 55.5 141 23.4
MELO3C034829.2 Cucumis melo HOM05D003146 ORTHO05D001819 4.7e-06 55.5 156 25.0
MELO3C019864.2 Cucumis melo HOM05D003146 ORTHO05D001819 6.2e-06 55.1 162 24.1
CsaV3_6G022330 Cucumis sativus L. HOM05D003146 ORTHO05D001819 8.0e-06 54.7 158 23.4
Dinv22853 Davidia involucrata HOM05D009438 ORTHO05D010870 8.0e-06 54.7 120 28.3


User provided reference genes

Program Settings