Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0216 Salvia bowleyana HOM05D001925 ORTHO05D005701 0.0e+00 1135.2 598 100.0
Migut.B01766 Erythranthe guttata HOM05D001925 ORTHO05D005701 3.0e-228 795.4 529 75.2
SGA_v2.0_scaffold4G02302 Striga asiatica HOM05D001925 ORTHO05D005701 2.3e-225 785.8 523 75.5
Oeu015817.1 Olea europaea HOM05D001925 ORTHO05D005701 2.3e-204 716.1 528 68.6
vmacro13268 Vaccinium macrocarpon HOM05D001925 ORTHO05D005701 6.6e-204 714.5 528 68.4
Rhsim07G0013900 Rhododendron simsii HOM05D001925 ORTHO05D005701 3.3e-203 712.2 527 67.7
Actinidia10039 Actinidia chinensis HOM05D001925 ORTHO05D005701 1.2e-200 703.7 527 67.2
CSS0009302 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 5.8e-200 701.4 526 68.1
CSS0022743 Camellia sinensis var. sinensis HOM05D001925 ORTHO05D005701 5.8e-200 701.4 526 68.1
CiPaw.01G062800 Carya illinoinensis HOM05D001925 ORTHO05D005701 2.4e-198 696.0 525 67.0
QL04p053597 Quercus lobata HOM05D001925 ORTHO05D005701 3.0e-196 689.1 524 67.0
TAR636G2317 Trochodendron aralioides HOM05D001925 ORTHO05D005701 1.5e-195 686.8 527 65.8
GSVIVG01008477001 Vitis vinifera HOM05D001925 ORTHO05D005701 1.5e-195 686.8 525 66.9
Lj6A572T62 Lonicera japonica HOM05D001925 ORTHO05D005701 1.2e-192 677.2 526 65.6
Haze_15511 Corylus avellana HOM05D001925 ORTHO05D005701 1.0e-191 674.1 525 64.6
DCAR_007446 Daucus carota HOM05D001925 ORTHO05D005701 2.2e-191 672.9 524 65.8
Cc02_g38160 Coffea canephora HOM05D001925 ORTHO05D005701 2.9e-191 672.5 525 64.8
Lj6A578T43 Lonicera japonica HOM05D001925 ORTHO05D005701 2.9e-191 672.5 526 64.8
CAN.G78.90 Capsicum annuum HOM05D001925 ORTHO05D005701 4.9e-191 671.8 526 64.8
Nitab4.5_0000583g0200 Nicotiana tabacum HOM05D001925 ORTHO05D005701 6.5e-191 671.4 529 64.3
Cfa003907 Carpinus fangiana HOM05D001925 ORTHO05D005701 1.1e-190 670.6 525 64.6
Peaxi162Scf00020g00723 Petunia axillaris HOM05D001925 ORTHO05D005701 2.7e-189 666.0 527 63.8
Nn6g33390 Nelumbo nucifera HOM05D001925 ORTHO05D005701 2.3e-188 662.9 526 63.9
Nitab4.5_0006018g0050 Nicotiana tabacum HOM05D001925 ORTHO05D005701 3.0e-188 662.5 520 64.4
CANSAT56G3724 Cannabis sativa HOM05D001925 ORTHO05D005701 1.1e-185 654.1 527 63.4
Atru.chr5.509 Acer truncatum HOM05D001925 ORTHO05D005701 1.8e-185 653.3 524 64.3
Cpa.g.sc11.17 Carica papaya HOM05D001925 ORTHO05D005701 6.9e-185 651.4 524 61.3
Sabra14G0062200 Salix brachista HOM05D001925 ORTHO05D005701 3.4e-184 649.0 526 64.1
Gohir.A11G089700 Gossypium hirsutum HOM05D001925 ORTHO05D005701 4.5e-184 648.7 526 63.9
COL.COLO4_12725 Corchorus olitorius HOM05D001925 ORTHO05D005701 1.0e-183 647.5 524 64.5
Potri.014G085900 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.0e-183 647.5 526 63.9
Gorai.007G100400 Gossypium raimondii HOM05D001925 ORTHO05D005701 2.2e-183 646.4 526 64.1
Sopen01g038540 Solanum pennellii HOM05D001925 ORTHO05D005701 2.2e-183 646.4 527 62.8
PGSC0003DMG400000174 Solanum tuberosum HOM05D001925 ORTHO05D005701 2.2e-183 646.4 528 62.9
Ciclev10019660m.g Citrus clementina HOM05D001925 ORTHO05D005701 2.9e-183 646.0 522 64.9
Manes.05G033300 Manihot esculenta HOM05D001925 ORTHO05D005701 2.9e-183 646.0 526 62.5
Duzib138G1334 Durio zibethinus HOM05D001925 ORTHO05D005701 1.4e-182 643.7 530 63.6
Gohir.D11G094000 Gossypium hirsutum HOM05D001925 ORTHO05D005701 1.4e-182 643.7 526 64.1
Solyc01g094760.3 Solanum lycopersicum HOM05D001925 ORTHO05D005701 4.2e-182 642.1 527 62.4
arahy.Tifrunner.gnm1.ann1.69YTHK Arachis hypogaea HOM05D001925 ORTHO05D005701 5.5e-182 641.7 526 61.6
Thecc.01G357800 Theobroma cacao HOM05D001925 ORTHO05D005701 2.3e-180 636.3 525 64.0
Lj7A511T78 Lonicera japonica HOM05D001925 ORTHO05D005701 3.0e-180 636.0 526 62.4
TWI73G0882 Tripterygium wilfordii HOM05D001925 ORTHO05D005701 1.1e-179 634.0 518 61.2
MD01G1065000 Malus domestica HOM05D001925 ORTHO05D005701 9.7e-179 630.9 536 61.4
HanXRQChr04g0121151 Helianthus annuus HOM05D001925 ORTHO05D005701 1.6e-178 630.2 529 62.2
RcHm_v2.0_Chr2g0161261 Rosa chinensis HOM05D001925 ORTHO05D005701 4.8e-178 628.6 496 64.9
Eucgr.L01587 Eucalyptus grandis HOM05D001925 ORTHO05D005701 8.2e-178 627.9 529 61.4
RcHm_v2.0_Chr1g0355901 Rosa chinensis HOM05D001925 ORTHO05D005701 8.2e-178 627.9 497 65.2
FvH4_7g14490 Fragaria vesca HOM05D001925 ORTHO05D005701 6.9e-177 624.8 498 63.9
ECA236G3836 Erigeron canadensis HOM05D001925 ORTHO05D005701 1.3e-175 620.5 518 63.1
MBI04_g28752_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 1.3e-175 620.5 521 61.2
Ca_07928_v3 Cicer arietinum L. HOM05D001925 ORTHO05D005701 5.0e-175 618.6 527 60.0
Prupe.2G172000 Prunus persica HOM05D001925 ORTHO05D005701 6.5e-175 618.2 492 64.2
Psat4g001160 Pisum sativum HOM05D001925 ORTHO05D005701 1.4e-174 617.1 526 59.9
ClCG06G003620 Citrullus lanatus HOM05D001925 ORTHO05D005701 3.2e-174 615.9 524 60.5
VMungo1383G1901 Vigna mungo HOM05D001925 ORTHO05D005701 4.2e-174 615.5 528 60.6
Medtr7g077840 Medicago truncatula HOM05D001925 ORTHO05D005701 5.5e-174 615.1 528 60.2
Lsat_1_v5_gn_7_4881 Lactuca sativa HOM05D001925 ORTHO05D005701 7.2e-174 614.8 526 61.6
THA.LOC104825846 Tarenaya hassleriana HOM05D001925 ORTHO05D005701 1.2e-173 614.0 526 61.2
Sed0000605 Sechium edule HOM05D001925 ORTHO05D005701 2.1e-173 613.2 524 60.3
MELO3C021204.2 Cucumis melo HOM05D001925 ORTHO05D005701 6.1e-173 611.7 524 60.1
Phvul.008G061800 Phaseolus vulgaris HOM05D001925 ORTHO05D005701 6.1e-173 611.7 528 60.4
Lj1g0000866 Lotus japonicus HOM05D001925 ORTHO05D005701 6.7e-172 608.2 526 60.6
Glyma.18G234000 Glycine max HOM05D001925 ORTHO05D005701 8.8e-172 607.8 528 58.7
PGR004G0833 Punica granatum HOM05D001925 ORTHO05D005701 5.7e-171 605.1 528 59.5
arahy.Tifrunner.gnm1.ann1.9GVB5D Arachis hypogaea HOM05D001925 ORTHO05D005701 1.7e-170 603.6 532 60.0
arahy.Tifrunner.gnm1.ann1.NC5V2N Arachis hypogaea HOM05D001925 ORTHO05D005701 2.8e-170 602.8 532 60.2
Hund16654 Selenicereus undatus HOM05D001925 ORTHO05D005701 2.8e-170 602.8 562 56.6
BcaB02g07622 Brassica carinata HOM05D001925 ORTHO05D005701 4.8e-170 602.1 527 58.6
Sp5g05460 Schrenkiella parvula HOM05D001925 ORTHO05D005701 3.1e-169 599.4 527 58.8
BraA07t29988Z Brassica rapa HOM05D001925 ORTHO05D005701 1.2e-168 597.4 526 57.6
AL7G22330 Arabidopsis lyrata HOM05D001925 ORTHO05D005701 1.5e-168 597.0 527 57.5
A07p23240 Brassica napus HOM05D001925 ORTHO05D005701 2.6e-168 596.3 526 57.2
BcaC08g44822 Brassica carinata HOM05D001925 ORTHO05D005701 1.3e-167 594.0 527 57.3
AT4G29910 Arabidopsis thaliana HOM05D001925 ORTHO05D005701 6.5e-167 591.7 523 57.4
C06p24120 Brassica napus HOM05D001925 ORTHO05D005701 5.5e-166 588.6 527 57.1
BolC6t37570H Brassica oleracea HOM05D001925 ORTHO05D005701 5.5e-166 588.6 527 57.1
Eucgr.D01236 Eucalyptus grandis HOM05D001925 ORTHO05D005701 2.6e-163 579.7 527 58.6
FAN03G1293 Fragaria x ananassa HOM05D001925 ORTHO05D005701 5.7e-163 578.6 498 60.2
FAN10G1478 Fragaria x ananassa HOM05D001925 ORTHO05D005701 7.4e-163 578.2 498 60.0
FAN06G1763 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.3e-162 577.4 498 60.2
BcaB02g07621 Brassica carinata HOM05D001925 ORTHO05D005701 2.8e-162 576.2 527 56.9
Lalb_Chr13g0304081 Lupinus albus HOM05D001925 ORTHO05D005701 3.7e-162 575.9 526 58.4
CARHR237820 Cardamine hirsuta HOM05D001925 ORTHO05D005701 6.3e-162 575.1 519 57.6
FAN10G3665 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.4e-161 573.9 498 59.6
Aqoxy2G04021 Aquilegia oxysepala HOM05D001925 ORTHO05D005701 1.8e-161 573.5 528 55.3
FAN06G3551 Fragaria x ananassa HOM05D001925 ORTHO05D005701 3.1e-161 572.8 498 59.8
CDE08G0676 Ceratophyllum demersum HOM05D001925 ORTHO05D005701 1.2e-160 570.9 522 56.5
Thhalv10005869m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 4.5e-160 568.9 526 55.9
EL10Ac1g00402 Beta vulgaris HOM05D001925 ORTHO05D005701 1.7e-159 567.0 536 56.2
Ah.05g180520 Amaranthus hybridus HOM05D001925 ORTHO05D001453 2.2e-159 566.6 542 56.1
TPR.G37845 Trifolium pratense HOM05D001925 ORTHO05D005701 1.9e-158 563.5 528 56.4
PSO384G0118 Papaver somniferum HOM05D001925 ORTHO05D005701 9.4e-158 561.2 557 54.6
FAN01G0375 Fragaria x ananassa HOM05D001925 ORTHO05D005701 8.0e-157 558.1 497 58.4
Aa31LG2G20640 Aethionema arabicum HOM05D001925 ORTHO05D005701 1.0e-156 557.8 527 55.6
ATR0068G004 Amborella trichopoda HOM05D001925 ORTHO05D005701 4.4e-155 552.4 522 53.6
Dinv43827 Davidia involucrata HOM05D001925 ORTHO05D005701 4.4e-155 552.4 417 66.9
Glyma.09G258700 Glycine max HOM05D001925 ORTHO05D005701 3.7e-154 549.3 528 55.5
Sc01g0003490 Simmondsia chinensis HOM05D001925 ORTHO05D005701 1.3e-143 514.2 426 63.1
AUR62004371 Chenopodium quinoa HOM05D001925 ORTHO05D005701 1.7e-143 513.8 536 51.5
AUR62022580 Chenopodium quinoa HOM05D001925 ORTHO05D005701 2.9e-143 513.1 536 51.7
CsaV3_6G000620 Cucumis sativus L. HOM05D001925 ORTHO05D005701 3.0e-132 476.5 418 58.1
Carub.0007s1073 Capsella rubella HOM05D001925 ORTHO05D005701 4.7e-125 452.6 396 58.6
Oeu050467.2 Olea europaea HOM05D001925 ORTHO05D005701 1.4e-124 451.1 523 50.5
Zm00001eb214490 Zea mays HOM05D001925 ORTHO05D005701 6.4e-122 442.2 529 46.5
Os03g0759500 Oryza sativa ssp. japonica HOM05D001925 ORTHO05D005701 3.2e-121 439.9 481 49.5
PSO339G3045 Papaver somniferum HOM05D001925 ORTHO05D005701 8.3e-114 415.2 488 49.6
BcaC07g40027 Brassica carinata HOM05D001925 ORTHO05D005701 5.6e-110 402.5 467 48.0
SEGI_03119 Sequoiadendron giganteum HOM05D001925 ORTHO05D005701 1.1e-108 398.3 559 40.8
arahy.Tifrunner.gnm1.ann1.SID920 Arachis hypogaea HOM05D001925 ORTHO05D005701 4.4e-107 392.9 425 52.0
Carub.0002s1689 Capsella rubella HOM05D001925 ORTHO05D005701 7.6e-107 392.1 341 58.1
arahy.Tifrunner.gnm1.ann1.IR4EKV Arachis hypogaea HOM05D001925 ORTHO05D005701 3.2e-105 386.7 305 64.6
ECA236G4017 Erigeron canadensis HOM05D001925 ORTHO05D005701 2.6e-99 367.1 309 64.1
HPP92_019868 Vanilla planifolia HOM05D001925 ORTHO05D005701 2.7e-96 357.1 341 55.7
arahy.Tifrunner.gnm1.ann1.D25PMP Arachis hypogaea HOM05D001925 ORTHO05D005701 9.3e-89 332.0 424 46.0
SMO147G0283 Selaginella moellendorffii HOM05D001925 ORTHO05D005701 9.3e-89 332.0 487 39.2
AagrBONN_evm.TU.Sc2ySwM_368.2511 Anthoceros agrestis HOM05D001925 ORTHO05D005701 1.4e-84 318.2 508 38.6
Pp3c17_13600 Physcomitrium patens HOM05D001925 ORTHO05D005701 1.1e-81 308.5 503 39.2
Potri.001G135975 Populus trichocarpa HOM05D001925 ORTHO05D005701 1.2e-80 305.1 265 57.0
Mapoly0177s0008 Marchantia polymorpha HOM05D001925 ORTHO05D005701 2.1e-77 294.3 472 37.5
C08p32440 Brassica napus HOM05D001925 ORTHO05D005701 3.4e-75 287.0 487 38.2
BolC8t50859H Brassica oleracea HOM05D001925 ORTHO05D005701 1.0e-74 285.4 487 38.2
MD07G1135400 Malus domestica HOM05D001925 ORTHO05D005701 2.5e-73 280.8 333 49.8
TPR.G26686 Trifolium pratense HOM05D001925 ORTHO05D005701 2.4e-60 237.7 271 48.3
arahy.Tifrunner.gnm1.ann1.IM3547 Arachis hypogaea HOM05D001925 ORTHO05D005701 4.1e-60 236.9 227 57.3
arahy.Tifrunner.gnm1.ann1.FEJ64N Arachis hypogaea HOM05D001925 ORTHO05D005701 6.9e-60 236.1 201 62.2
Actinidia20895 Actinidia chinensis HOM05D001925 ORTHO05D005701 6.5e-58 229.6 177 62.1
BraA09t40455Z Brassica rapa HOM05D001925 ORTHO05D005701 1.8e-36 158.3 170 51.2
Dinv43826 Davidia involucrata HOM05D001925 ORTHO05D005701 1.1e-33 149.1 105 73.3
FvH4_2g10060 Fragaria vesca HOM05D001925 ORTHO05D005701 9.4e-33 146.0 205 45.9
MCO11G226 Micromonas commoda HOM05D001925 ORTHO05D005701 8.8e-31 139.4 580 24.0
Zm00001eb057980 Zea mays HOM05D001925 ORTHO05D005701 1.2e-30 139.0 452 28.8
A09p50040 Brassica napus HOM05D001925 ORTHO05D005701 4.1e-28 130.6 89 73.0
TPR.G16202 Trifolium pratense HOM05D001925 ORTHO05D005701 4.1e-28 130.6 108 60.2
BcaC08g44824 Brassica carinata HOM05D001925 ORTHO05D005701 9.1e-28 129.4 112 62.5
A09p50030 Brassica napus HOM05D001925 ORTHO05D005701 2.9e-26 124.4 88 64.8
C06p24140 Brassica napus HOM05D001925 ORTHO05D005701 1.9e-25 121.7 97 66.0
CBR_g58810 Chara braunii HOM05D001925 ORTHO05D005701 4.7e-24 117.1 549 26.6
FAN24G1219 Fragaria x ananassa HOM05D001925 ORTHO05D005701 9.8e-22 109.4 89 62.9
PRCOL_00005952 Prasinoderma coloniale HOM05D001925 ORTHO05D005701 4.9e-21 107.1 484 24.6
arahy.Tifrunner.gnm1.ann1.ZHBQ27 Arachis hypogaea HOM05D002506 ORTHO05D002879 1.0e-18 99.4 88 60.2
MBI04_g47116_MAGBIO Magnolia biondii HOM05D001925 ORTHO05D005701 1.0e-18 99.4 171 36.8
FvH4_2g10061 Fragaria vesca HOM05D001925 ORTHO05D005701 9.5e-17 92.8 81 59.3
FAN15G3430 Fragaria x ananassa HOM05D001925 ORTHO05D005701 1.2e-16 92.4 91 53.8
Thhalv10027287m.g Eutrema salsugineum HOM05D001925 ORTHO05D005701 8.9e-15 86.3 80 48.8
C09p49930 Brassica napus HOM05D001925 ORTHO05D039571 8.9e-07 59.7 108 38.0
Cre07.g355200 Chlamydomonas reinhardtii HOM05D001925 ORTHO05D005701 8.9e-07 59.7 491 22.8
SGA_v2.0_scaffold2881G54235 Striga asiatica HOM05D001925 ORTHO05D005701 1.2e-06 59.3 44 65.9
FAN22G1210 Fragaria x ananassa HOM05D001925 ORTHO05D005701 2.6e-06 58.2 53 54.7


User provided reference genes

Program Settings