Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow3G0196 Salvia bowleyana HOM05D003152 ORTHO05D359340 1.8e-44 182.2 89 100.0
SalBow4G2256 Salvia bowleyana HOM05D003152 ORTHO05D353235 3.2e-22 108.2 89 67.4
SalBow3G3020 Salvia bowleyana HOM05D003152 ORTHO05D352519 1.2e-21 106.3 89 68.5
SalBow5G3979 Salvia bowleyana HOM05D003152 ORTHO05D360321 4.1e-17 91.3 74 68.9
SalBow1G3248 Salvia bowleyana HOM05D003152 ORTHO05D004094 4.5e-16 87.8 74 66.2
Migut.J01479 Erythranthe guttata HOM05D003152 ORTHO05D004094 2.3e-12 75.5 71 60.6
SGA_v2.0_scaffold69G23257 Striga asiatica HOM05D003152 ORTHO05D004094 5.7e-11 70.9 71 59.2
MSTRG.19706 Avicennia marina HOM05D003152 ORTHO05D004094 3.7e-10 68.2 71 57.7
SalBow6G1354 Salvia bowleyana HOM05D003152 ORTHO05D004094 3.7e-10 68.2 72 56.9
Oeu056512.1 Olea europaea HOM05D003152 ORTHO05D004094 1.1e-09 66.6 71 54.9
Nitab4.5_0000021g1070 Nicotiana tabacum HOM05D003152 ORTHO05D004094 3.1e-09 65.1 71 54.9
TWI81G1045 Tripterygium wilfordii HOM05D003152 ORTHO05D004094 4.1e-09 64.7 71 53.5
Prupe.5G075100 Prunus persica HOM05D003152 ORTHO05D004094 5.4e-09 64.3 70 51.4
QL06p053048 Quercus lobata HOM05D003152 ORTHO05D004094 5.4e-09 64.3 71 50.7
CAN.G732.11 Capsicum annuum HOM05D003152 ORTHO05D004094 7.0e-09 63.9 71 54.9
Actinidia02109 Actinidia chinensis HOM05D003152 ORTHO05D004094 9.2e-09 63.5 71 53.5
Oeu002545.1 Olea europaea HOM05D003152 ORTHO05D004094 9.2e-09 63.5 71 53.5
Peaxi162Scf00516g00327 Petunia axillaris HOM05D003152 ORTHO05D004094 1.2e-08 63.2 71 53.5
Oeu009849.2 Olea europaea HOM05D003152 ORTHO05D004094 1.6e-08 62.8 71 52.1
GSVIVG01001278001 Vitis vinifera HOM05D003152 ORTHO05D004094 1.6e-08 62.8 71 53.5
GSVIVG01004779001 Vitis vinifera HOM05D003152 ORTHO05D004094 1.6e-08 62.8 71 53.5
MSTRG.26221 Avicennia marina HOM05D003152 ORTHO05D004094 2.0e-08 62.4 71 52.1
CiPaw.12G107100 Carya illinoinensis HOM05D003152 ORTHO05D004094 2.0e-08 62.4 71 50.7
Nitab4.5_0004670g0040 Nicotiana tabacum HOM05D003152 ORTHO05D004094 2.0e-08 62.4 71 53.5
Eucgr.E00458 Eucalyptus grandis HOM05D003152 ORTHO05D004094 3.5e-08 61.6 71 52.1
MD08G1135900 Malus domestica HOM05D003152 ORTHO05D004094 3.5e-08 61.6 71 52.1
MD12G1033000 Malus domestica HOM05D003152 ORTHO05D004094 3.5e-08 61.6 71 52.1
Lsat_1_v5_gn_6_109081 Lactuca sativa HOM05D003152 ORTHO05D004094 4.5e-08 61.2 71 50.7
Manes.01G076900 Manihot esculenta HOM05D003152 ORTHO05D004094 4.5e-08 61.2 68 51.5
Manes.02G036200 Manihot esculenta HOM05D003152 ORTHO05D004094 4.5e-08 61.2 71 52.1
MD09G1022600 Malus domestica HOM05D003152 ORTHO05D004094 7.8e-08 60.5 71 50.7
MD06G1063400 Malus domestica HOM05D003152 ORTHO05D046704 1.0e-07 60.1 71 50.7
TWI60G0644 Tripterygium wilfordii HOM05D003152 ORTHO05D004094 1.0e-07 60.1 71 52.1
Thecc.03G256500 Theobroma cacao HOM05D003152 ORTHO05D004094 1.3e-07 59.7 71 49.3
Aqoxy5G03922 Aquilegia oxysepala HOM05D003152 ORTHO05D004094 1.7e-07 59.3 74 50.0
Cc06_g13250 Coffea canephora HOM05D003152 ORTHO05D004094 1.7e-07 59.3 71 52.1
Dinv39108 Davidia involucrata HOM05D003152 ORTHO05D004094 1.7e-07 59.3 71 49.3
Cpa.g.sc29.131 Carica papaya HOM05D003152 ORTHO05D004094 2.3e-07 58.9 71 49.3
CiPaw.11G150900 Carya illinoinensis HOM05D003152 ORTHO05D004094 2.3e-07 58.9 71 47.9
Glyma.18G211400 Glycine max HOM05D003152 ORTHO05D004094 2.3e-07 58.9 71 47.9
Lalb_Chr22g0349441 Lupinus albus HOM05D003152 ORTHO05D004094 2.3e-07 58.9 72 47.2
TAR636G2130 Trochodendron aralioides HOM05D003152 ORTHO05D004094 2.3e-07 58.9 71 49.3
QL12p013407 Quercus lobata HOM05D003152 ORTHO05D004094 2.9e-07 58.5 71 50.7
Solyc03g097470.3 Solanum lycopersicum HOM05D003152 ORTHO05D004094 2.9e-07 58.5 71 50.7
Sopen03g028240 Solanum pennellii HOM05D003152 ORTHO05D004094 2.9e-07 58.5 71 50.7
TAR629G0380 Trochodendron aralioides HOM05D003152 ORTHO05D004094 2.9e-07 58.5 71 49.3
Aqoxy1G02009 Aquilegia oxysepala HOM05D003152 ORTHO05D004094 3.9e-07 58.2 74 48.6
CDE11G1032 Ceratophyllum demersum HOM05D003152 ORTHO05D004094 3.9e-07 58.2 69 49.3
ClCG01G003860 Citrullus lanatus HOM05D003152 ORTHO05D004094 3.9e-07 58.2 74 45.9
PGR042G2869 Punica granatum HOM05D003152 ORTHO05D004094 3.9e-07 58.2 71 47.9
DCAR_018049 Daucus carota HOM05D003152 ORTHO05D002674 5.0e-07 57.8 71 45.1
DCAR_027796 Daucus carota HOM05D003152 ORTHO05D004094 5.0e-07 57.8 71 45.1
Glyma.09G277400 Glycine max HOM05D003152 ORTHO05D004094 5.0e-07 57.8 71 46.5
Gohir.A09G195600 Gossypium hirsutum HOM05D003152 ORTHO05D004094 5.0e-07 57.8 71 50.7
Gohir.D09G190200 Gossypium hirsutum HOM05D003152 ORTHO05D004094 5.0e-07 57.8 71 50.7
Gorai.006G212800 Gossypium raimondii HOM05D003152 ORTHO05D004094 5.0e-07 57.8 71 50.7
CSS0013092 Camellia sinensis var. sinensis HOM05D003152 ORTHO05D004094 6.6e-07 57.4 72 52.8
CAN.G285.10 Capsicum annuum HOM05D003152 ORTHO05D004094 6.6e-07 57.4 77 44.2
PGSC0003DMG400026308 Solanum tuberosum HOM05D003152 ORTHO05D004094 6.6e-07 57.4 77 44.2
Atru.chr9.1375 Acer truncatum HOM05D003152 ORTHO05D004094 8.6e-07 57.0 70 50.0
DCAR_008467 Daucus carota HOM05D003152 ORTHO05D004094 8.6e-07 57.0 74 41.9
ECA233G4900 Erigeron canadensis HOM05D003152 ORTHO05D004094 8.6e-07 57.0 71 47.9
CDE09G1199 Ceratophyllum demersum HOM05D003152 ORTHO05D004094 1.1e-06 56.6 70 47.1
Ciclev10020462m.g Citrus clementina HOM05D003152 ORTHO05D004094 1.1e-06 56.6 71 50.7
Thhalv10023499m.g Eutrema salsugineum HOM05D003152 ORTHO05D004094 1.1e-06 56.6 72 44.4
HanXRQChr02g0049441 Helianthus annuus HOM05D003152 ORTHO05D004094 1.1e-06 56.6 71 47.9
Solyc08g006560.3 Solanum lycopersicum HOM05D003152 ORTHO05D004094 1.1e-06 56.6 77 42.9
THA.LOC104823549 Tarenaya hassleriana HOM05D003152 ORTHO05D004094 1.1e-06 56.6 75 45.3
unitig_21.g20649 Utricularia gibba HOM05D003152 ORTHO05D004094 1.1e-06 56.6 71 50.7
Actinidia27454 Actinidia chinensis HOM05D003152 ORTHO05D004094 1.5e-06 56.2 71 47.9
Lj8C258T8 Lonicera japonica HOM05D003152 ORTHO05D004094 1.5e-06 56.2 71 43.7
Sopen08g002520 Solanum pennellii HOM05D003152 ORTHO05D004094 1.5e-06 56.2 77 42.9
VMungo1383G1558 Vigna mungo HOM05D003152 ORTHO05D004094 1.5e-06 56.2 71 46.5
arahy.Tifrunner.gnm1.ann1.EZ70MQ Arachis hypogaea HOM05D003152 ORTHO05D004094 1.9e-06 55.8 71 45.1
arahy.Tifrunner.gnm1.ann1.UBEE9G Arachis hypogaea HOM05D003152 ORTHO05D004094 1.9e-06 55.8 71 45.1
CANSAT21G0390 Cannabis sativa HOM05D003152 ORTHO05D004094 1.9e-06 55.8 71 47.9
AUR62024611 Chenopodium quinoa HOM05D003152 ORTHO05D004094 1.9e-06 55.8 71 46.5
Dinv21605 Davidia involucrata HOM05D003152 ORTHO05D004094 1.9e-06 55.8 71 47.9
HanXRQChr05g0148701 Helianthus annuus HOM05D003152 ORTHO05D004094 2.5e-06 55.5 70 48.6
Hma1.2p1_1414F.1_g281900 Hydrangea macrophylla HOM05D003152 ORTHO05D004094 2.5e-06 55.5 70 45.7
Phvul.008G086600 Phaseolus vulgaris HOM05D003152 ORTHO05D004094 2.5e-06 55.5 71 45.1
C09p19490 Brassica napus HOM05D003152 ORTHO05D004094 3.3e-06 55.1 72 43.1
COL.COLO4_37209 Corchorus olitorius HOM05D003152 ORTHO05D004094 3.3e-06 55.1 71 49.3
Gohir.A11G026500 Gossypium hirsutum HOM05D003152 ORTHO05D004094 3.3e-06 55.1 64 48.4
Gohir.D11G025800 Gossypium hirsutum HOM05D003152 ORTHO05D004094 3.3e-06 55.1 64 48.4
Gorai.007G028000 Gossypium raimondii HOM05D003152 ORTHO05D004094 3.3e-06 55.1 64 48.4
PSO017G6794 Papaver somniferum HOM05D003152 ORTHO05D004094 3.3e-06 55.1 71 47.9
PSO170G2789 Papaver somniferum HOM05D003152 ORTHO05D004094 3.3e-06 55.1 71 47.9
Rhsim07G0104900 Rhododendron simsii HOM05D003152 ORTHO05D004094 3.3e-06 55.1 71 46.5
Aa31LG2G230 Aethionema arabicum HOM05D003152 ORTHO05D004094 4.3e-06 54.7 69 43.5
AT1G62640 Arabidopsis thaliana HOM05D003152 ORTHO05D004094 4.3e-06 54.7 72 43.1
BolC9t54852H Brassica oleracea HOM05D003152 ORTHO05D004094 4.3e-06 54.7 72 43.1
Rhsim03G0143900 Rhododendron simsii HOM05D003152 ORTHO05D004094 4.3e-06 54.7 74 45.9
CSS0031797 Camellia sinensis var. sinensis HOM05D003152 ORTHO05D004094 5.6e-06 54.3 71 46.5
AUR62011765 Chenopodium quinoa HOM05D003152 ORTHO05D004094 5.6e-06 54.3 71 43.7
Sabra01G0093100 Salix brachista HOM05D003152 ORTHO05D004094 7.3e-06 53.9 72 45.8
THA.LOC104809460 Tarenaya hassleriana HOM05D003152 ORTHO05D004094 7.3e-06 53.9 72 45.8
TPR.G19173 Trifolium pratense HOM05D003152 ORTHO05D004094 7.3e-06 53.9 71 45.1
vmacro06967 Vaccinium macrocarpon HOM05D003152 ORTHO05D004094 7.3e-06 53.9 71 46.5
AL2G13230 Arabidopsis lyrata HOM05D003152 ORTHO05D004094 9.5e-06 53.5 72 43.1
BcaB07g31342 Brassica carinata HOM05D003152 ORTHO05D004094 9.5e-06 53.5 72 41.7
BcaC04g22425 Brassica carinata HOM05D003152 ORTHO05D004094 9.5e-06 53.5 72 41.7
A09p16150 Brassica napus HOM05D003152 ORTHO05D004094 9.5e-06 53.5 72 41.7
BraA09t37250Z Brassica rapa HOM05D003152 ORTHO05D004094 9.5e-06 53.5 72 41.7
CAN.G530.5 Capsicum annuum HOM05D003152 ORTHO05D004094 9.5e-06 53.5 71 40.8
Lj8C337T1 Lonicera japonica HOM05D003152 ORTHO05D004094 9.5e-06 53.5 74 44.6


User provided reference genes

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