Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SalBow2G3562 Salvia bowleyana HOM05D000539 ORTHO05D000592 6.0e-146 520.8 253 100.0
SalBow1G1492 Salvia bowleyana HOM05D005548 ORTHO05D007497 3.0e-28 129.8 68 92.6
SalBow3G2933 Salvia bowleyana HOM05D000539 ORTHO05D000592 1.2e-24 117.9 304 28.6
ClCG07G011140 Citrullus lanatus HOM05D000539 ORTHO05D000233 1.7e-15 87.4 229 26.6
SalBow3G2055 Salvia bowleyana HOM05D000539 ORTHO05D000592 5.4e-14 82.4 285 25.6
Rhsim02G0154800 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.3e-12 77.0 219 27.9
RcHm_v2.0_Chr2g0112301 Rosa chinensis HOM05D000539 ORTHO05D000233 2.5e-11 73.6 288 21.9
Ca_02337_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 5.6e-11 72.4 249 25.3
MELO3C035035.2 Cucumis melo HOM05D007110 ORTHO05D000592 1.6e-10 70.9 221 24.9
FAN28G1329 Fragaria x ananassa HOM05D000723 ORTHO05D001760 1.6e-10 70.9 278 22.3
RhsimUnG0164900 Rhododendron simsii HOM05D000539 ORTHO05D000233 2.1e-10 70.5 279 24.0
FvH4_1g20221 Fragaria vesca HOM05D000539 ORTHO05D000233 3.6e-10 69.7 288 22.2
Ca_06768_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.1e-09 68.2 135 31.1
Hma1.2p1_0043F.1_g025950 Hydrangea macrophylla HOM05D000539 ORTHO05D000233 1.1e-09 68.2 223 25.1
SHI29099 Sapria himalayana HOM05D000616 ORTHO05D000233 1.1e-09 68.2 213 27.2
Ca_02221_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.4e-09 67.8 135 31.1
RcHm_v2.0_Chr3g0483461 Rosa chinensis HOM05D000539 ORTHO05D000233 1.8e-09 67.4 296 22.0
Prupe.2G053400 Prunus persica HOM05D000539 ORTHO05D000592 3.1e-09 66.6 164 29.9
FAN23G1195 Fragaria x ananassa HOM05D000723 ORTHO05D001760 4.0e-09 66.2 310 20.6
CSS0026465 Camellia sinensis var. sinensis HOM05D000539 ORTHO05D000233 5.2e-09 65.9 224 27.7
MELO3C034500.2 Cucumis melo HOM05D007110 ORTHO05D000592 5.2e-09 65.9 138 31.2
Rhsim01G0127800 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.2e-09 65.9 299 23.1
Rhsim09G0096300 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.2e-09 65.9 299 23.1
MELO3C032631.2 Cucumis melo HOM05D007110 ORTHO05D000592 6.9e-09 65.5 147 29.9
Prupe.1G028600 Prunus persica HOM05D000539 ORTHO05D000592 6.9e-09 65.5 164 29.3
Prupe.2G011100 Prunus persica HOM05D000539 ORTHO05D000592 6.9e-09 65.5 164 29.9
Prupe.3G153900 Prunus persica HOM05D000539 ORTHO05D000592 6.9e-09 65.5 164 29.9
Prupe.7G008900 Prunus persica HOM05D000539 ORTHO05D000592 6.9e-09 65.5 164 29.9
RcHm_v2.0_Chr3g0482291 Rosa chinensis HOM05D000539 ORTHO05D000592 1.5e-08 64.3 276 22.1
RcHm_v2.0_Chr7g0240601 Rosa chinensis HOM05D000539 ORTHO05D000592 1.5e-08 64.3 276 22.1
Prupe.7G055100 Prunus persica HOM05D000539 ORTHO05D000233 3.4e-08 63.2 159 29.6
Rhsim10G0157200 Rhododendron simsii HOM05D000107 ORTHO05D000062 3.4e-08 63.2 298 22.8
SalBow7G1279 Salvia bowleyana HOM05D000539 ORTHO05D000592 3.4e-08 63.2 60 46.7
Rhsim02G0146100 Rhododendron simsii HOM05D000539 ORTHO05D000233 4.4e-08 62.8 58 53.4
Rhsim05G0213000 Rhododendron simsii HOM05D000539 ORTHO05D000233 5.8e-08 62.4 58 53.4
RcHm_v2.0_Chr4g0390571 Rosa chinensis HOM05D000539 ORTHO05D000592 5.8e-08 62.4 274 22.3
CSS0023486 Camellia sinensis var. sinensis HOM05D000616 ORTHO05D000233 7.6e-08 62.0 232 26.7
Prupe.3G113900 Prunus persica HOM05D000539 ORTHO05D000592 7.6e-08 62.0 158 28.5
Ca_07064_v3 Cicer arietinum L. HOM05D002644 ORTHO05D003267 1.3e-07 61.2 245 24.5
Prupe.6G160400 Prunus persica HOM05D000539 ORTHO05D000592 1.7e-07 60.8 97 37.1
RcHm_v2.0_Chr5g0071751 Rosa chinensis HOM05D000539 ORTHO05D000592 1.7e-07 60.8 200 23.5
Ciclev10012877m.g Citrus clementina HOM05D000539 ORTHO05D000592 2.2e-07 60.5 78 39.7
FAN18G4025 Fragaria x ananassa HOM05D000539 ORTHO05D000592 2.2e-07 60.5 70 41.4
Aqoxy6G01916 Aquilegia oxysepala HOM05D000539 ORTHO05D000233 2.9e-07 60.1 59 55.9
MELO3C027996.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.8e-07 59.7 176 26.7
CsaV3_4G007110 Cucumis sativus L. HOM05D000539 ORTHO05D000233 3.8e-07 59.7 110 29.1
FvH4_6g31293 Fragaria vesca HOM05D000539 ORTHO05D000233 3.8e-07 59.7 242 24.4
MELO3C016215.2 Cucumis melo HOM05D000539 ORTHO05D000233 4.9e-07 59.3 110 28.2
MELO3C034970.2 Cucumis melo HOM05D007110 ORTHO05D000592 4.9e-07 59.3 160 28.8
FAN14G2497 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.4e-07 58.9 245 23.7
FAN15G0858 Fragaria x ananassa HOM05D000539 ORTHO05D000592 6.4e-07 58.9 248 25.8
RcHm_v2.0_Chr6g0271071 Rosa chinensis HOM05D000539 ORTHO05D000592 1.1e-06 58.2 292 22.3
FvH4_3g18051 Fragaria vesca HOM05D000539 ORTHO05D000592 1.4e-06 57.8 61 45.9
FvH4_3g19213 Fragaria vesca HOM05D000539 ORTHO05D000233 1.4e-06 57.8 61 45.9
FAN08G1656 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-06 57.8 61 45.9
FAN08G3599 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-06 57.8 61 45.9
FAN09G0062 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-06 57.8 61 45.9
FAN10G1471 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-06 57.8 61 45.9
FAN10G3810 Fragaria x ananassa HOM05D000539 ORTHO05D000592 1.4e-06 57.8 61 45.9
PSO017G3964 Papaver somniferum HOM05D010375 ORTHO05D015177 1.4e-06 57.8 174 28.7
RcHm_v2.0_Chr4g0401821 Rosa chinensis HOM05D000539 ORTHO05D000592 1.4e-06 57.8 61 39.3
FvH4_3g30982 Fragaria vesca HOM05D000539 ORTHO05D000233 1.9e-06 57.4 156 25.0
RcHm_v2.0_Chr3g0494841 Rosa chinensis HOM05D000539 ORTHO05D000592 2.4e-06 57.0 126 32.5
SalBow6G4879 Salvia bowleyana HOM05D000539 ORTHO05D000592 2.4e-06 57.0 56 46.4
MELO3C029607.2 Cucumis melo HOM05D007110 ORTHO05D000592 3.2e-06 56.6 220 23.2
FvH4_5g25000 Fragaria vesca HOM05D000539 ORTHO05D000592 3.2e-06 56.6 78 35.9
FvH4_6g12903 Fragaria vesca HOM05D000539 ORTHO05D000592 3.2e-06 56.6 218 26.1
FAN07G0141 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.2e-06 56.6 61 44.3
FAN22G1303 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.2e-06 56.6 61 44.3
FAN28G2561 Fragaria x ananassa HOM05D000539 ORTHO05D000592 3.2e-06 56.6 61 44.3
RcHm_v2.0_Chr7g0228381 Rosa chinensis HOM05D000539 ORTHO05D000592 3.2e-06 56.6 64 39.1
FvH4_3g31715 Fragaria vesca HOM05D000539 ORTHO05D000592 4.2e-06 56.2 61 44.3
FvH4_6g23351 Fragaria vesca HOM05D000539 ORTHO05D000233 4.2e-06 56.2 61 44.3
FvH4_6g53025 Fragaria vesca HOM05D000539 ORTHO05D000592 4.2e-06 56.2 219 25.1
RcHm_v2.0_Chr3g0495531 Rosa chinensis HOM05D000539 ORTHO05D000592 4.2e-06 56.2 97 34.0
RcHm_v2.0_Chr5g0020841 Rosa chinensis HOM05D000539 ORTHO05D000592 4.2e-06 56.2 67 37.3
FAN17G2631 Fragaria x ananassa HOM05D000539 ORTHO05D000592 5.4e-06 55.8 57 43.9
RcHm_v2.0_Chr6g0261391 Rosa chinensis HOM05D000539 ORTHO05D000592 5.4e-06 55.8 67 37.3
SalBow5G2382 Salvia bowleyana HOM05D000539 ORTHO05D000592 5.4e-06 55.8 64 45.3
SalBow5G3967 Salvia bowleyana HOM05D000539 ORTHO05D000592 5.4e-06 55.8 64 45.3
SalBow5G4813 Salvia bowleyana HOM05D000539 ORTHO05D000592 5.4e-06 55.8 64 45.3
Atru.chr1.522 Acer truncatum HOM05D000539 ORTHO05D000592 7.1e-06 55.5 106 34.9
FvH4_4g09210 Fragaria vesca HOM05D000539 ORTHO05D000592 7.1e-06 55.5 57 45.6
FAN23G1554 Fragaria x ananassa HOM05D000539 ORTHO05D000592 7.1e-06 55.5 59 44.1
Prupe.3G119600 Prunus persica HOM05D000539 ORTHO05D000592 7.1e-06 55.5 61 49.2
Rhsim01G0018900 Rhododendron simsii HOM05D000539 ORTHO05D000233 7.1e-06 55.5 291 22.0
RcHm_v2.0_Chr3g0495121 Rosa chinensis HOM05D000539 ORTHO05D000592 7.1e-06 55.5 97 34.0
RcHm_v2.0_Chr4g0407981 Rosa chinensis HOM05D000539 ORTHO05D000592 7.1e-06 55.5 83 37.3
FvH4_4g10052 Fragaria vesca HOM05D000539 ORTHO05D000233 9.3e-06 55.1 59 44.1
FvH4_7g02995 Fragaria vesca HOM05D000539 ORTHO05D000592 9.3e-06 55.1 61 44.3
FAN12G1860 Fragaria x ananassa HOM05D000539 ORTHO05D000592 9.3e-06 55.1 85 36.5
PSO170G1413 Papaver somniferum HOM05D010375 ORTHO05D015177 9.3e-06 55.1 62 41.9
PSO349G0233 Papaver somniferum HOM05D010375 ORTHO05D015177 9.3e-06 55.1 62 41.9
PSO478G4356 Papaver somniferum HOM05D010375 ORTHO05D015177 9.3e-06 55.1 62 41.9
Prupe.1G036300 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.1G173700 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.1G185000 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.1G397800 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.2G062000 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.2G089500 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.2G155700 Prunus persica HOM05D000539 ORTHO05D000233 9.3e-06 55.1 59 45.8
Prupe.2G157500 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.4G254700 Prunus persica HOM05D000539 ORTHO05D000233 9.3e-06 55.1 59 45.8
Prupe.5G051700 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.6G142900 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.6G180100 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.7G029100 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.7G057400 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
Prupe.8G054500 Prunus persica HOM05D000539 ORTHO05D000592 9.3e-06 55.1 59 45.8
RcHm_v2.0_Chr5g0032111 Rosa chinensis HOM05D000539 ORTHO05D000592 9.3e-06 55.1 61 41.0
RcHm_v2.0_Chr7g0197301 Rosa chinensis HOM05D000539 ORTHO05D000592 9.3e-06 55.1 85 32.9
RcHm_v2.0_Chr7g0235651 Rosa chinensis HOM05D000539 ORTHO05D000233 9.3e-06 55.1 85 32.9


User provided reference genes

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